RNA–Protein interactions for RNA: ENST00000465395.5

ARPC2-208, Transcript of actin related protein 2/3 complex subunit 2, humanhuman

TSL 2

Gene ARPC2, Length 816 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytosol, Lamellipodium, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC2-208ENST00000465395 AEBP2Q6ZN18 517 aaPredicted RBP26.09■■□□□ 1.77
ARPC2-208ENST00000465395 CHIC1Q5VXU3 224 aa24.32■■□□□ 1.48
ARPC2-208ENST00000465395 SENP3Q9H4L4 574 aaPredicted RBP22.37■■□□□ 1.17
ARPC2-208ENST00000465395 PHF23Q9BUL5 403 aaPredicted RBP21.95■■□□□ 1.1
ARPC2-208ENST00000465395 POTEDQ86YR6 584 aa21.32■■□□□ 1
ARPC2-208ENST00000465395 FOXD1Q16676 465 aa21.01■□□□□ 0.95
ARPC2-208ENST00000465395 NISCHQ9Y2I1 1504 aa20.33■□□□□ 0.85
ARPC2-208ENST00000465395 MSH5O43196 834 aa20.02■□□□□ 0.8
ARPC2-208ENST00000465395 PIAS4Q8N2W9 510 aaPredicted RBP19.38■□□□□ 0.69
ARPC2-208ENST00000465395 PPP6R1Q9UPN7 881 aa18.86■□□□□ 0.61
ARPC2-208ENST00000465395 ADRA2BP18089 450 aa18.74■□□□□ 0.59
ARPC2-208ENST00000465395 PLPPR3Q6T4P5 718 aa18.5■□□□□ 0.55
ARPC2-208ENST00000465395 CCDC180Q9P1Z9 1646 aa18.23■□□□□ 0.51
ARPC2-208ENST00000465395 ABCC9O60706 1549 aa18.19■□□□□ 0.5
ARPC2-208ENST00000465395 CACNB1Q02641 598 aaPredicted RBP17.83■□□□□ 0.44
ARPC2-208ENST00000465395 DMRT2Q9Y5R5 561 aa17.58■□□□□ 0.4
ARPC2-208ENST00000465395 MAPK8IP2Q13387 824 aaPredicted RBP17.53■□□□□ 0.4
ARPC2-208ENST00000465395 RB1CC1Q8TDY2 1594 aa17.26■□□□□ 0.35
ARPC2-208ENST00000465395 DNAJC5BQ9UF47 199 aa17.23■□□□□ 0.35
ARPC2-208ENST00000465395 NACADO15069 1562 aa17.17■□□□□ 0.34
ARPC2-208ENST00000465395 UNC13AQ9UPW8 1703 aa17.15■□□□□ 0.34
ARPC2-208ENST00000465395 SCAF1Q9H7N4 1312 aaKnown RBP17.09■□□□□ 0.33
ARPC2-208ENST00000465395 RNF39Q9H2S5 420 aa17■□□□□ 0.31
ARPC2-208ENST00000465395 BICRAQ9NZM4 1560 aa16.98■□□□□ 0.31
ARPC2-208ENST00000465395 MYO15BQ96JP2 1530 aa16.96■□□□□ 0.31
ARPC2-208ENST00000465395 DCAF8L1A6NGE4 600 aa16.95■□□□□ 0.3
ARPC2-208ENST00000465395 DCAF8L2P0C7V8 631 aa16.95■□□□□ 0.3
ARPC2-208ENST00000465395 PABPN1Q86U42 306 aaKnown RBP eCLIP16.94■□□□□ 0.3
ARPC2-208ENST00000465395 ZCCHC6Q5VYS8 1495 aaKnown RBP16.86■□□□□ 0.29
ARPC2-208ENST00000465395 DCAF1Q9Y4B6 1507 aa16.77■□□□□ 0.28
ARPC2-208ENST00000465395 C1QBPQ07021 282 aaKnown RBP16.67■□□□□ 0.26
ARPC2-208ENST00000465395 SCRIBQ14160 1630 aa16.6■□□□□ 0.25
ARPC2-208ENST00000465395 HOXD11P31277 338 aaPredicted RBP16.53■□□□□ 0.24
ARPC2-208ENST00000465395 POTEHQ6S545 545 aa16.5■□□□□ 0.23
ARPC2-208ENST00000465395 SHROOM4Q9ULL8 1493 aa16.49■□□□□ 0.23
ARPC2-208ENST00000465395 CC2D2AQ9P2K1 1620 aa16.48■□□□□ 0.23
ARPC2-208ENST00000465395 EIF4G1Q04637 1599 aaKnown RBP16.43■□□□□ 0.22
ARPC2-208ENST00000465395 CECR2Q9BXF3 1484 aa16.35■□□□□ 0.21
ARPC2-208ENST00000465395 RNF216Q9NWF9 866 aaPredicted RBP16.13■□□□□ 0.17
ARPC2-208ENST00000465395 PPP4R3CPQ6ZMV5 832 aa16.1■□□□□ 0.17
ARPC2-208ENST00000465395 CNKSR2Q8WXI2 1034 aa16.02■□□□□ 0.16
ARPC2-208ENST00000465395 NCAPD3P42695 1498 aa15.9■□□□□ 0.14
ARPC2-208ENST00000465395 SMARCA4P51532 1647 aa15.87■□□□□ 0.13
ARPC2-208ENST00000465395 ATAD2BQ9ULI0 1458 aa15.86■□□□□ 0.13
ARPC2-208ENST00000465395 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.76■□□□□ 0.115e-7■■□□□ 13.3
ARPC2-208ENST00000465395 HMGXB3Q12766 1538 aa15.76■□□□□ 0.11
ARPC2-208ENST00000465395 PEG3Q9GZU2 1588 aa15.74■□□□□ 0.11
ARPC2-208ENST00000465395 SMARCA2P51531 1590 aa15.73■□□□□ 0.11
ARPC2-208ENST00000465395 MROH2BQ7Z745 1585 aa15.72■□□□□ 0.11
ARPC2-208ENST00000465395 NESP48681 1621 aa15.72■□□□□ 0.11
ARPC2-208ENST00000465395 BAZ1AQ9NRL2 1556 aaPredicted RBP15.7■□□□□ 0.1
ARPC2-208ENST00000465395 DNAJC5Q9H3Z4 198 aa15.64■□□□□ 0.09
ARPC2-208ENST00000465395 BAZ1BQ9UIG0 1483 aaKnown RBP15.61■□□□□ 0.09
ARPC2-208ENST00000465395 CUX2O14529 1486 aa15.6■□□□□ 0.09
ARPC2-208ENST00000465395 DSG3P32926 999 aa15.58■□□□□ 0.08
ARPC2-208ENST00000465395 THOC2Q8NI27 1593 aaKnown RBP15.56■□□□□ 0.08
ARPC2-208ENST00000465395 WIZO95785 1651 aa15.55■□□□□ 0.08
ARPC2-208ENST00000465395 ERCC6Q03468 1493 aa15.55■□□□□ 0.08
ARPC2-208ENST00000465395 KIF21AQ7Z4S6 1674 aa15.54■□□□□ 0.08
ARPC2-208ENST00000465395 LAMC3Q9Y6N6 1575 aa15.49■□□□□ 0.07
ARPC2-208ENST00000465395 CAPN15O75808 1086 aa15.44■□□□□ 0.06
ARPC2-208ENST00000465395 SPINK5Q9NQ38 1064 aaPredicted RBP15.43■□□□□ 0.06
ARPC2-208ENST00000465395 CADPSQ9ULU8 1353 aa15.36■□□□□ 0.05
ARPC2-208ENST00000465395 RSF1Q96T23 1441 aaPredicted RBP15.35■□□□□ 0.05
ARPC2-208ENST00000465395 U3KPZ7 1027 aaPredicted RBP15.34■□□□□ 0.05
ARPC2-208ENST00000465395 PDS5BQ9NTI5 1447 aa15.31■□□□□ 0.04
ARPC2-208ENST00000465395 WDR62O43379 1518 aa15.28■□□□□ 0.04
ARPC2-208ENST00000465395 TOP2AP11388 1531 aaKnown RBP15.25■□□□□ 0.03
ARPC2-208ENST00000465395 MRC2Q9UBG0 1479 aa15.25■□□□□ 0.03
ARPC2-208ENST00000465395 CFTRP13569 1480 aa15.24■□□□□ 0.03
ARPC2-208ENST00000465395 FANCD2Q9BXW9 1451 aa15.2■□□□□ 0.02
ARPC2-208ENST00000465395 URB2Q14146 1524 aaKnown RBP15.17■□□□□ 0.02
ARPC2-208ENST00000465395 CEP164Q9UPV0 1460 aa15.16■□□□□ 0.02
ARPC2-208ENST00000465395 PRDM2Q13029 1718 aa15.16■□□□□ 0.02
ARPC2-208ENST00000465395 NCBP3Q53F19 620 aaKnown RBP15.13■□□□□ 0.01
ARPC2-208ENST00000465395 CCDC88BA6NC98 1476 aa15.13■□□□□ 0.01
ARPC2-208ENST00000465395 ABCB7O75027 752 aa15.02■□□□□ -0
ARPC2-208ENST00000465395 ZNF608Q9ULD9 1512 aaPredicted RBP14.98□□□□□ -0.01
ARPC2-208ENST00000465395 CHRDL2Q6WN34 429 aa14.98□□□□□ -0.01
ARPC2-208ENST00000465395 SP7Q8TDD2 431 aaPredicted RBP14.98□□□□□ -0.01
ARPC2-208ENST00000465395 NPM3O75607 178 aaKnown RBP14.96□□□□□ -0.01
ARPC2-208ENST00000465395 TRHP20396 242 aaPredicted RBP14.95□□□□□ -0.02
ARPC2-208ENST00000465395 TOPBP1Q92547 1522 aa14.95□□□□□ -0.02
ARPC2-208ENST00000465395 TARBP1Q13395 1621 aaKnown RBP14.9□□□□□ -0.02
ARPC2-208ENST00000465395 DNMBPQ6XZF7 1577 aa14.87□□□□□ -0.03
ARPC2-208ENST00000465395 RBM42Q9BTD8 480 aaKnown RBP14.87□□□□□ -0.03
ARPC2-208ENST00000465395 IFT140Q96RY7 1462 aa14.87□□□□□ -0.03
ARPC2-208ENST00000465395 EIF4G3O43432 1585 aaKnown RBP14.85□□□□□ -0.03
ARPC2-208ENST00000465395 TRIM41Q8WV44 630 aa14.85□□□□□ -0.03
ARPC2-208ENST00000465395 ZNF219Q9P2Y4 722 aaPredicted RBP14.85□□□□□ -0.03
ARPC2-208ENST00000465395 OSCARQ8IYS5 282 aa14.84□□□□□ -0.03
ARPC2-208ENST00000465395 RIMBP3CA6NJZ7 1639 aa14.81□□□□□ -0.04
ARPC2-208ENST00000465395 RIMBP3BA6NNM3 1639 aa14.81□□□□□ -0.04
ARPC2-208ENST00000465395 RIMBP3Q9UFD9 1639 aa14.81□□□□□ -0.04
ARPC2-208ENST00000465395 POLA1P09884 1462 aaPredicted RBP14.81□□□□□ -0.04
ARPC2-208ENST00000465395 AQRO60306 1485 aaKnown RBP eCLIP14.8□□□□□ -0.044e-9■■□□□ 14.1
ARPC2-208ENST00000465395 CHD1O14646 1710 aa14.8□□□□□ -0.04
ARPC2-208ENST00000465395 ABCC8Q09428 1581 aa14.78□□□□□ -0.04
ARPC2-208ENST00000465395 RAD54L2Q9Y4B4 1467 aa14.78□□□□□ -0.04
ARPC2-208ENST00000465395 CUX1P39880 1505 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms