RNA–Protein interactions for RNA: ENST00000464863.1

PSMB9-210, Transcript of proteasome subunit beta 9, humanhuman

TSL 2

Gene PSMB9, Length 2,676 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB9-210ENST00000464863 NISCHQ9Y2I1 1504 aa30.82■■■□□ 2.52
PSMB9-210ENST00000464863 CCDC180Q9P1Z9 1646 aa26.66■■□□□ 1.86
PSMB9-210ENST00000464863 ZCCHC6Q5VYS8 1495 aaKnown RBP25.87■■□□□ 1.73
PSMB9-210ENST00000464863 DCAF8L2P0C7V8 631 aa25.85■■□□□ 1.73
PSMB9-210ENST00000464863 SHROOM4Q9ULL8 1493 aa25.56■■□□□ 1.68
PSMB9-210ENST00000464863 ABCC9O60706 1549 aa25.55■■□□□ 1.68
PSMB9-210ENST00000464863 DCAF1Q9Y4B6 1507 aa25.3■■□□□ 1.64
PSMB9-210ENST00000464863 SUPT5HO00267 1087 aaKnown RBP25.05■■□□□ 1.6
PSMB9-210ENST00000464863 MYO15BQ96JP2 1530 aa24.93■■□□□ 1.58
PSMB9-210ENST00000464863 NACADO15069 1562 aa24.88■■□□□ 1.57
PSMB9-210ENST00000464863 SCRIBQ14160 1630 aa24.82■■□□□ 1.56
PSMB9-210ENST00000464863 HRCP23327 699 aa24.74■■□□□ 1.55
PSMB9-210ENST00000464863 RB1CC1Q8TDY2 1594 aa24.7■■□□□ 1.54
PSMB9-210ENST00000464863 CHIC1Q5VXU3 224 aa24.59■■□□□ 1.53
PSMB9-210ENST00000464863 PCGF6Q9BYE7 350 aa24.41■■□□□ 1.5
PSMB9-210ENST00000464863 UNC13AQ9UPW8 1703 aa24.27■■□□□ 1.48
PSMB9-210ENST00000464863 PABPN1Q86U42 306 aaKnown RBP eCLIP24.23■■□□□ 1.47
PSMB9-210ENST00000464863 PPARGC1BQ86YN6 1023 aaKnown RBP24.21■■□□□ 1.47
PSMB9-210ENST00000464863 CECR2Q9BXF3 1484 aa24.11■■□□□ 1.45
PSMB9-210ENST00000464863 BICRAQ9NZM4 1560 aa24.05■■□□□ 1.44
PSMB9-210ENST00000464863 RSF1Q96T23 1441 aaPredicted RBP24.01■■□□□ 1.43
PSMB9-210ENST00000464863 LOC105371045A0A1W2PR82 267 aa23.94■■□□□ 1.42
PSMB9-210ENST00000464863 MROH2BQ7Z745 1585 aa23.91■■□□□ 1.42
PSMB9-210ENST00000464863 TRIM26Q12899 539 aaPredicted RBP23.76■■□□□ 1.39
PSMB9-210ENST00000464863 BAZ1AQ9NRL2 1556 aaPredicted RBP23.75■■□□□ 1.39
PSMB9-210ENST00000464863 WIZO95785 1651 aa23.72■■□□□ 1.39
PSMB9-210ENST00000464863 SMARCA4P51532 1647 aa23.67■■□□□ 1.38
PSMB9-210ENST00000464863 ZEB1P37275 1124 aaPredicted RBP23.43■■□□□ 1.34
PSMB9-210ENST00000464863 TOP2AP11388 1531 aaKnown RBP23.34■■□□□ 1.33
PSMB9-210ENST00000464863 EIF4G1Q04637 1599 aaKnown RBP23.32■■□□□ 1.32
PSMB9-210ENST00000464863 ATAD2BQ9ULI0 1458 aa23.32■■□□□ 1.32
PSMB9-210ENST00000464863 PEG3Q9GZU2 1588 aa23.26■■□□□ 1.31
PSMB9-210ENST00000464863 TRIM41Q8WV44 630 aa23.25■■□□□ 1.31
PSMB9-210ENST00000464863 PELP1Q8IZL8 1130 aaKnown RBP23.24■■□□□ 1.31
PSMB9-210ENST00000464863 CCDC88BA6NC98 1476 aa23.23■■□□□ 1.31
PSMB9-210ENST00000464863 SMARCA2P51531 1590 aa23.2■■□□□ 1.3
PSMB9-210ENST00000464863 BAZ1BQ9UIG0 1483 aaKnown RBP23.19■■□□□ 1.3
PSMB9-210ENST00000464863 SCAF1Q9H7N4 1312 aaKnown RBP23.17■■□□□ 1.3
PSMB9-210ENST00000464863 FAM9AQ8IZU1 332 aaPredicted RBP23.14■■□□□ 1.29
PSMB9-210ENST00000464863 NCAPD3P42695 1498 aa23.04■■□□□ 1.28
PSMB9-210ENST00000464863 CC2D2AQ9P2K1 1620 aa22.99■■□□□ 1.27
PSMB9-210ENST00000464863 EHMT2Q96KQ7 1210 aa22.97■■□□□ 1.27
PSMB9-210ENST00000464863 HMGXB3Q12766 1538 aa22.94■■□□□ 1.26
PSMB9-210ENST00000464863 ABCC8Q09428 1581 aa22.85■■□□□ 1.25
PSMB9-210ENST00000464863 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.76■■□□□ 1.23
PSMB9-210ENST00000464863 DNAJC5BQ9UF47 199 aa22.74■■□□□ 1.23
PSMB9-210ENST00000464863 ACIN1Q9UKV3 1341 aaKnown RBP22.73■■□□□ 1.23
PSMB9-210ENST00000464863 CCER1Q8TC90 406 aaPredicted RBP22.7■■□□□ 1.22
PSMB9-210ENST00000464863 NEUROD1Q13562 356 aa22.69■■□□□ 1.22
PSMB9-210ENST00000464863 WRNQ14191 1432 aaPredicted RBP eCLIP22.59■■□□□ 1.21
PSMB9-210ENST00000464863 CFTRP13569 1480 aa22.57■■□□□ 1.2
PSMB9-210ENST00000464863 DIEXFQ68CQ4 756 aaKnown RBP22.56■■□□□ 1.2
PSMB9-210ENST00000464863 CADPSQ9ULU8 1353 aa22.53■■□□□ 1.2
PSMB9-210ENST00000464863 GTF3C3Q9Y5Q9 886 aa22.51■■□□□ 1.19
PSMB9-210ENST00000464863 SYNJ1O43426 1573 aa22.51■■□□□ 1.19
PSMB9-210ENST00000464863 CENPBP07199 599 aaPredicted RBP22.47■■□□□ 1.19
PSMB9-210ENST00000464863 NESP48681 1621 aa22.46■■□□□ 1.19
PSMB9-210ENST00000464863 SOGA1O94964 1423 aa22.44■■□□□ 1.18
PSMB9-210ENST00000464863 RUSC2Q8N2Y8 1516 aa22.39■■□□□ 1.17
PSMB9-210ENST00000464863 TTBK1Q5TCY1 1321 aaPredicted RBP22.36■■□□□ 1.17
PSMB9-210ENST00000464863 CUX1P39880 1505 aa22.32■■□□□ 1.16
PSMB9-210ENST00000464863 TOP2BQ02880 1626 aa22.31■■□□□ 1.16
PSMB9-210ENST00000464863 CEP162Q5TB80 1403 aa22.3■■□□□ 1.16
PSMB9-210ENST00000464863 PRDM2Q13029 1718 aa22.3■■□□□ 1.16
PSMB9-210ENST00000464863 FANCD2Q9BXW9 1451 aa22.29■■□□□ 1.16
PSMB9-210ENST00000464863 BIVM-ERCC5R4GMW8 1640 aa22.23■■□□□ 1.15
PSMB9-210ENST00000464863 ZNF316A6NFI3 1004 aaPredicted RBP22.23■■□□□ 1.15
PSMB9-210ENST00000464863 CSRNP3Q8WYN3 585 aa22.23■■□□□ 1.15
PSMB9-210ENST00000464863 TNIKQ9UKE5 1360 aa22.21■■□□□ 1.15
PSMB9-210ENST00000464863 LAMC3Q9Y6N6 1575 aa22.2■■□□□ 1.14
PSMB9-210ENST00000464863 MYT1Q01538 1121 aa22.19■■□□□ 1.14
PSMB9-210ENST00000464863 EEA1Q15075 1411 aa22.12■■□□□ 1.13
PSMB9-210ENST00000464863 CEP164Q9UPV0 1460 aa22.11■■□□□ 1.13
PSMB9-210ENST00000464863 PDS5BQ9NTI5 1447 aa22.1■■□□□ 1.13
PSMB9-210ENST00000464863 FGD5Q6ZNL6 1462 aa22.08■■□□□ 1.13
PSMB9-210ENST00000464863 YTHDC1Q96MU7 727 aaKnown RBP22.08■■□□□ 1.13
PSMB9-210ENST00000464863 UBTFP17480 764 aaKnown RBP22.08■■□□□ 1.12
PSMB9-210ENST00000464863 KIF21AQ7Z4S6 1674 aa22.05■■□□□ 1.12
PSMB9-210ENST00000464863 TOPBP1Q92547 1522 aa22.04■■□□□ 1.12
PSMB9-210ENST00000464863 URB2Q14146 1524 aaKnown RBP22.03■■□□□ 1.12
PSMB9-210ENST00000464863 MIER1Q8N108 512 aa22.03■■□□□ 1.12
PSMB9-210ENST00000464863 DNMBPQ6XZF7 1577 aa22.01■■□□□ 1.11
PSMB9-210ENST00000464863 RAD54L2Q9Y4B4 1467 aa22■■□□□ 1.11
PSMB9-210ENST00000464863 CUX2O14529 1486 aa21.98■■□□□ 1.11
PSMB9-210ENST00000464863 KIF27Q86VH2 1401 aa21.98■■□□□ 1.11
PSMB9-210ENST00000464863 POLA1P09884 1462 aaPredicted RBP21.96■■□□□ 1.11
PSMB9-210ENST00000464863 GOLGA3Q08378 1498 aa21.96■■□□□ 1.11
PSMB9-210ENST00000464863 RAPGEF2Q9Y4G8 1499 aa21.94■■□□□ 1.1
PSMB9-210ENST00000464863 HNRNPUL2Q1KMD3 747 aaKnown RBP21.93■■□□□ 1.1
PSMB9-210ENST00000464863 RANGAP1P46060 587 aaPredicted RBP21.9■■□□□ 1.1
PSMB9-210ENST00000464863 KIF21BO75037 1637 aa21.87■■□□□ 1.09
PSMB9-210ENST00000464863 IGF1RP08069 1367 aa21.85■■□□□ 1.09
PSMB9-210ENST00000464863 ERCC6Q03468 1493 aa21.83■■□□□ 1.09
PSMB9-210ENST00000464863 PRXQ9BXM0 1461 aa21.83■■□□□ 1.08
PSMB9-210ENST00000464863 TDRD9Q8NDG6 1382 aaKnown RBP21.81■■□□□ 1.08
PSMB9-210ENST00000464863 MRC2Q9UBG0 1479 aa21.81■■□□□ 1.08
PSMB9-210ENST00000464863 ABCA10Q8WWZ4 1543 aa21.8■■□□□ 1.08
PSMB9-210ENST00000464863 CLIP1P30622 1438 aa21.76■■□□□ 1.07
PSMB9-210ENST00000464863 CARMIL1Q5VZK9 1371 aa21.73■■□□□ 1.07
PSMB9-210ENST00000464863 VPS8Q8N3P4 1428 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms