RNA–Protein interactions for RNA: ENST00000464706.5

PAX3-209, Transcript of paired box 3, humanhuman

TSL 3

Gene PAX3, Length 822 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-209ENST00000464706 AEBP2Q6ZN18 517 aaPredicted RBP17.25■□□□□ 0.35
PAX3-209ENST00000464706 CHIC1Q5VXU3 224 aa16.75■□□□□ 0.27
PAX3-209ENST00000464706 NISCHQ9Y2I1 1504 aa14.85□□□□□ -0.03
PAX3-209ENST00000464706 PHF23Q9BUL5 403 aaPredicted RBP14.73□□□□□ -0.05
PAX3-209ENST00000464706 SENP3Q9H4L4 574 aaPredicted RBP14.63□□□□□ -0.07
PAX3-209ENST00000464706 FOXD1Q16676 465 aa13.6□□□□□ -0.23
PAX3-209ENST00000464706 PLPPR3Q6T4P5 718 aa13.56□□□□□ -0.24
PAX3-209ENST00000464706 CCDC180Q9P1Z9 1646 aa13.42□□□□□ -0.26
PAX3-209ENST00000464706 ABCC9O60706 1549 aa13.35□□□□□ -0.27
PAX3-209ENST00000464706 DNAJC5BQ9UF47 199 aa13.24□□□□□ -0.29
PAX3-209ENST00000464706 DNAJC5Q9H3Z4 198 aa13.04□□□□□ -0.32
PAX3-209ENST00000464706 ADRA2BP18089 450 aa13.03□□□□□ -0.32
PAX3-209ENST00000464706 PPP6R1Q9UPN7 881 aa13.03□□□□□ -0.32
PAX3-209ENST00000464706 PIAS4Q8N2W9 510 aaPredicted RBP12.82□□□□□ -0.36
PAX3-209ENST00000464706 RB1CC1Q8TDY2 1594 aa12.78□□□□□ -0.36
PAX3-209ENST00000464706 NACADO15069 1562 aa12.68□□□□□ -0.38
PAX3-209ENST00000464706 MSH5O43196 834 aa12.56□□□□□ -0.4
PAX3-209ENST00000464706 DCAF8L2P0C7V8 631 aa12.56□□□□□ -0.4
PAX3-209ENST00000464706 UNC13AQ9UPW8 1703 aa12.48□□□□□ -0.41
PAX3-209ENST00000464706 MYO15BQ96JP2 1530 aa12.48□□□□□ -0.41
PAX3-209ENST00000464706 PABPN1Q86U42 306 aaKnown RBP eCLIP12.4□□□□□ -0.42
PAX3-209ENST00000464706 BICRAQ9NZM4 1560 aa12.31□□□□□ -0.44
PAX3-209ENST00000464706 DCAF1Q9Y4B6 1507 aa12.3□□□□□ -0.44
PAX3-209ENST00000464706 ZCCHC6Q5VYS8 1495 aaKnown RBP12.29□□□□□ -0.44
PAX3-209ENST00000464706 SHROOM4Q9ULL8 1493 aa12.27□□□□□ -0.45
PAX3-209ENST00000464706 SCRIBQ14160 1630 aa12.16□□□□□ -0.46
PAX3-209ENST00000464706 CC2D2AQ9P2K1 1620 aa12.09□□□□□ -0.47
PAX3-209ENST00000464706 EIF4G1Q04637 1599 aaKnown RBP12.06□□□□□ -0.48
PAX3-209ENST00000464706 CECR2Q9BXF3 1484 aa12.06□□□□□ -0.48
PAX3-209ENST00000464706 TRIM41Q8WV44 630 aa12.04□□□□□ -0.48
PAX3-209ENST00000464706 PPP4R3CPQ6ZMV5 832 aa11.95□□□□□ -0.5
PAX3-209ENST00000464706 SCAF1Q9H7N4 1312 aaKnown RBP11.88□□□□□ -0.51
PAX3-209ENST00000464706 MAPK8IP2Q13387 824 aaPredicted RBP11.85□□□□□ -0.51
PAX3-209ENST00000464706 DMRT2Q9Y5R5 561 aa11.66□□□□□ -0.54
PAX3-209ENST00000464706 NCAPD3P42695 1498 aa11.65□□□□□ -0.54
PAX3-209ENST00000464706 SMARCA2P51531 1590 aa11.63□□□□□ -0.55
PAX3-209ENST00000464706 CNKSR2Q8WXI2 1034 aa11.62□□□□□ -0.55
PAX3-209ENST00000464706 SMARCA4P51532 1647 aa11.61□□□□□ -0.55
PAX3-209ENST00000464706 POTEDQ86YR6 584 aa11.61□□□□□ -0.55
PAX3-209ENST00000464706 ERCC6Q03468 1493 aa11.61□□□□□ -0.55
PAX3-209ENST00000464706 NCBP3Q53F19 620 aaKnown RBP11.6□□□□□ -0.55
PAX3-209ENST00000464706 HMGXB3Q12766 1538 aa11.6□□□□□ -0.55
PAX3-209ENST00000464706 CUX2O14529 1486 aa11.59□□□□□ -0.55
PAX3-209ENST00000464706 ATAD2BQ9ULI0 1458 aa11.59□□□□□ -0.55
PAX3-209ENST00000464706 KCNA4P22459 653 aa11.59□□□□□ -0.55
PAX3-209ENST00000464706 BAZ1AQ9NRL2 1556 aaPredicted RBP11.58□□□□□ -0.56
PAX3-209ENST00000464706 BAZ1BQ9UIG0 1483 aaKnown RBP11.53□□□□□ -0.56
PAX3-209ENST00000464706 PEG3Q9GZU2 1588 aa11.5□□□□□ -0.57
PAX3-209ENST00000464706 ILDR1Q86SU0 546 aaPredicted RBP11.49□□□□□ -0.57
PAX3-209ENST00000464706 LAMC3Q9Y6N6 1575 aa11.45□□□□□ -0.58
PAX3-209ENST00000464706 NESP48681 1621 aa11.43□□□□□ -0.58
PAX3-209ENST00000464706 NPM3O75607 178 aaKnown RBP11.43□□□□□ -0.58
PAX3-209ENST00000464706 RNF216Q9NWF9 866 aaPredicted RBP11.4□□□□□ -0.58
PAX3-209ENST00000464706 MROH2BQ7Z745 1585 aa11.4□□□□□ -0.58
PAX3-209ENST00000464706 PDS5BQ9NTI5 1447 aa11.38□□□□□ -0.59
PAX3-209ENST00000464706 HOXD11P31277 338 aaPredicted RBP11.38□□□□□ -0.59
PAX3-209ENST00000464706 THOC2Q8NI27 1593 aaKnown RBP11.37□□□□□ -0.59
PAX3-209ENST00000464706 KIF21AQ7Z4S6 1674 aa11.36□□□□□ -0.59
PAX3-209ENST00000464706 CADPSQ9ULU8 1353 aa11.3□□□□□ -0.6
PAX3-209ENST00000464706 WIZO95785 1651 aa11.3□□□□□ -0.6
PAX3-209ENST00000464706 MRC2Q9UBG0 1479 aa11.25□□□□□ -0.61
PAX3-209ENST00000464706 DCAF8L1A6NGE4 600 aa11.22□□□□□ -0.61
PAX3-209ENST00000464706 WDR62O43379 1518 aa11.22□□□□□ -0.61
PAX3-209ENST00000464706 CEP164Q9UPV0 1460 aa11.22□□□□□ -0.61
PAX3-209ENST00000464706 TOP2AP11388 1531 aaKnown RBP11.18□□□□□ -0.62
PAX3-209ENST00000464706 FANCD2Q9BXW9 1451 aa11.18□□□□□ -0.62
PAX3-209ENST00000464706 PRDM2Q13029 1718 aa11.17□□□□□ -0.62
PAX3-209ENST00000464706 CFTRP13569 1480 aa11.16□□□□□ -0.62
PAX3-209ENST00000464706 RSF1Q96T23 1441 aaPredicted RBP11.16□□□□□ -0.62
PAX3-209ENST00000464706 URB2Q14146 1524 aaKnown RBP11.05□□□□□ -0.64
PAX3-209ENST00000464706 OSCARQ8IYS5 282 aa11.05□□□□□ -0.64
PAX3-209ENST00000464706 TRHP20396 242 aaPredicted RBP11.04□□□□□ -0.64
PAX3-209ENST00000464706 SLC4A1APQ9BWU0 796 aaKnown RBP11.02□□□□□ -0.65
PAX3-209ENST00000464706 ABCC8Q09428 1581 aa11.01□□□□□ -0.65
PAX3-209ENST00000464706 CCDC88BA6NC98 1476 aa11□□□□□ -0.65
PAX3-209ENST00000464706 IFT140Q96RY7 1462 aa11□□□□□ -0.65
PAX3-209ENST00000464706 TOPBP1Q92547 1522 aa10.95□□□□□ -0.66
PAX3-209ENST00000464706 DNMBPQ6XZF7 1577 aa10.94□□□□□ -0.66
PAX3-209ENST00000464706 EIF4G3O43432 1585 aaKnown RBP10.91□□□□□ -0.66
PAX3-209ENST00000464706 ZNF608Q9ULD9 1512 aaPredicted RBP10.9□□□□□ -0.66
PAX3-209ENST00000464706 RIMBP3CA6NJZ7 1639 aa10.89□□□□□ -0.67
PAX3-209ENST00000464706 RIMBP3BA6NNM3 1639 aa10.89□□□□□ -0.67
PAX3-209ENST00000464706 RIMBP3Q9UFD9 1639 aa10.89□□□□□ -0.67
PAX3-209ENST00000464706 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.88□□□□□ -0.67
PAX3-209ENST00000464706 CHD1O14646 1710 aa10.87□□□□□ -0.67
PAX3-209ENST00000464706 TARBP1Q13395 1621 aaKnown RBP10.86□□□□□ -0.67
PAX3-209ENST00000464706 WDR97A6NE52 1622 aa10.84□□□□□ -0.67
PAX3-209ENST00000464706 ARHGEF11O15085 1522 aa10.84□□□□□ -0.67
PAX3-209ENST00000464706 POLA1P09884 1462 aaPredicted RBP10.83□□□□□ -0.68
PAX3-209ENST00000464706 SLC4A2P04920 1241 aa10.82□□□□□ -0.68
PAX3-209ENST00000464706 AQRO60306 1485 aaKnown RBP eCLIP10.81□□□□□ -0.68
PAX3-209ENST00000464706 FBLN2P98095 1184 aa10.8□□□□□ -0.68
PAX3-209ENST00000464706 SOGA1O94964 1423 aa10.79□□□□□ -0.68
PAX3-209ENST00000464706 FGD5Q6ZNL6 1462 aa10.76□□□□□ -0.69
PAX3-209ENST00000464706 RAD54L2Q9Y4B4 1467 aa10.76□□□□□ -0.69
PAX3-209ENST00000464706 RNF39Q9H2S5 420 aa10.76□□□□□ -0.69
PAX3-209ENST00000464706 MAGI1Q96QZ7 1491 aaPredicted RBP10.75□□□□□ -0.69
PAX3-209ENST00000464706 CYB5RLQ6IPT4 315 aa10.75□□□□□ -0.69
PAX3-209ENST00000464706 TDRD9Q8NDG6 1382 aaKnown RBP10.75□□□□□ -0.69
PAX3-209ENST00000464706 SYNJ1O43426 1573 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms