RNA–Protein interactions for RNA: ENST00000463966.5

DPPA4-202, Transcript of developmental pluripotency associated 4, humanhuman

TSL 2

Gene DPPA4, Length 1,087 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DPPA4-202ENST00000463966 AEBP2Q6ZN18 517 aaPredicted RBP28.35■■■□□ 2.13
DPPA4-202ENST00000463966 CHIC1Q5VXU3 224 aa27.42■■□□□ 1.98
DPPA4-202ENST00000463966 SENP3Q9H4L4 574 aaPredicted RBP24.13■■□□□ 1.45
DPPA4-202ENST00000463966 PHF23Q9BUL5 403 aaPredicted RBP24.07■■□□□ 1.44
DPPA4-202ENST00000463966 NISCHQ9Y2I1 1504 aa23.08■■□□□ 1.28
DPPA4-202ENST00000463966 FOXD1Q16676 465 aa22.4■■□□□ 1.18
DPPA4-202ENST00000463966 PLPPR3Q6T4P5 718 aa22.13■■□□□ 1.13
DPPA4-202ENST00000463966 PPP6R1Q9UPN7 881 aa21.32■■□□□ 1
DPPA4-202ENST00000463966 ADRA2BP18089 450 aa21.26■□□□□ 0.99
DPPA4-202ENST00000463966 PIAS4Q8N2W9 510 aaPredicted RBP21.03■□□□□ 0.96
DPPA4-202ENST00000463966 MSH5O43196 834 aa20.81■□□□□ 0.92
DPPA4-202ENST00000463966 CCDC180Q9P1Z9 1646 aa20.35■□□□□ 0.85
DPPA4-202ENST00000463966 SCAF1Q9H7N4 1312 aaKnown RBP19.51■□□□□ 0.71
DPPA4-202ENST00000463966 ABCC9O60706 1549 aa19.46■□□□□ 0.71
DPPA4-202ENST00000463966 POTEDQ86YR6 584 aa19.45■□□□□ 0.7
DPPA4-202ENST00000463966 PPP4R3CPQ6ZMV5 832 aa19.44■□□□□ 0.7
DPPA4-202ENST00000463966 MAPK8IP2Q13387 824 aaPredicted RBP19.38■□□□□ 0.69
DPPA4-202ENST00000463966 ZCCHC6Q5VYS8 1495 aaKnown RBP19.3■□□□□ 0.68
DPPA4-202ENST00000463966 DMRT2Q9Y5R5 561 aa19.21■□□□□ 0.67
DPPA4-202ENST00000463966 DCAF1Q9Y4B6 1507 aa19.17■□□□□ 0.66
DPPA4-202ENST00000463966 MYO15BQ96JP2 1530 aa19.11■□□□□ 0.65
DPPA4-202ENST00000463966 DCAF8L2P0C7V8 631 aa19.1■□□□□ 0.65
DPPA4-202ENST00000463966 NACADO15069 1562 aa19.06■□□□□ 0.64
DPPA4-202ENST00000463966 CNKSR2Q8WXI2 1034 aa18.99■□□□□ 0.63
DPPA4-202ENST00000463966 RB1CC1Q8TDY2 1594 aa18.97■□□□□ 0.63
DPPA4-202ENST00000463966 NCBP3Q53F19 620 aaKnown RBP18.87■□□□□ 0.61
DPPA4-202ENST00000463966 HOXD11P31277 338 aaPredicted RBP18.72■□□□□ 0.59
DPPA4-202ENST00000463966 RNF216Q9NWF9 866 aaPredicted RBP18.7■□□□□ 0.58
DPPA4-202ENST00000463966 KCNA4P22459 653 aa18.63■□□□□ 0.57
DPPA4-202ENST00000463966 NPM3O75607 178 aaKnown RBP18.57■□□□□ 0.56
DPPA4-202ENST00000463966 SCRIBQ14160 1630 aa18.53■□□□□ 0.56
DPPA4-202ENST00000463966 UNC13AQ9UPW8 1703 aa18.43■□□□□ 0.54
DPPA4-202ENST00000463966 SHROOM4Q9ULL8 1493 aa18.39■□□□□ 0.54
DPPA4-202ENST00000463966 BICRAQ9NZM4 1560 aa18.32■□□□□ 0.52
DPPA4-202ENST00000463966 DCAF8L1A6NGE4 600 aa18.3■□□□□ 0.52
DPPA4-202ENST00000463966 PABPN1Q86U42 306 aaKnown RBP eCLIP18.26■□□□□ 0.51
DPPA4-202ENST00000463966 DNAJC5BQ9UF47 199 aa18.2■□□□□ 0.5
DPPA4-202ENST00000463966 BAZ1AQ9NRL2 1556 aaPredicted RBP17.88■□□□□ 0.45
DPPA4-202ENST00000463966 CECR2Q9BXF3 1484 aa17.88■□□□□ 0.45
DPPA4-202ENST00000463966 EIF4G1Q04637 1599 aaKnown RBP17.83■□□□□ 0.44
DPPA4-202ENST00000463966 SMARCA4P51532 1647 aa17.8■□□□□ 0.44
DPPA4-202ENST00000463966 RNF39Q9H2S5 420 aa17.8■□□□□ 0.44
DPPA4-202ENST00000463966 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.78■□□□□ 0.44
DPPA4-202ENST00000463966 MROH2BQ7Z745 1585 aa17.75■□□□□ 0.43
DPPA4-202ENST00000463966 RSF1Q96T23 1441 aaPredicted RBP17.72■□□□□ 0.43
DPPA4-202ENST00000463966 SLC4A1APQ9BWU0 796 aaKnown RBP17.69■□□□□ 0.42
DPPA4-202ENST00000463966 PEG3Q9GZU2 1588 aa17.66■□□□□ 0.42
DPPA4-202ENST00000463966 SMARCA2P51531 1590 aa17.65■□□□□ 0.42
DPPA4-202ENST00000463966 CC2D2AQ9P2K1 1620 aa17.64■□□□□ 0.41
DPPA4-202ENST00000463966 SLC4A2P04920 1241 aa17.62■□□□□ 0.41
DPPA4-202ENST00000463966 ATAD2BQ9ULI0 1458 aa17.62■□□□□ 0.41
DPPA4-202ENST00000463966 NCAPD3P42695 1498 aa17.58■□□□□ 0.41
DPPA4-202ENST00000463966 C1QBPQ07021 282 aaKnown RBP17.58■□□□□ 0.4
DPPA4-202ENST00000463966 WIZO95785 1651 aa17.56■□□□□ 0.4
DPPA4-202ENST00000463966 SUPT5HO00267 1087 aaKnown RBP17.56■□□□□ 0.4
DPPA4-202ENST00000463966 CACNB1Q02641 598 aaPredicted RBP17.52■□□□□ 0.4
DPPA4-202ENST00000463966 HMGXB3Q12766 1538 aa17.52■□□□□ 0.39
DPPA4-202ENST00000463966 BAZ1BQ9UIG0 1483 aaKnown RBP17.5■□□□□ 0.39
DPPA4-202ENST00000463966 U3KPZ7 1027 aaPredicted RBP17.48■□□□□ 0.39
DPPA4-202ENST00000463966 TOP2AP11388 1531 aaKnown RBP17.46■□□□□ 0.39
DPPA4-202ENST00000463966 FOXD4L1Q9NU39 408 aa17.26■□□□□ 0.35
DPPA4-202ENST00000463966 CCDC88BA6NC98 1476 aa17.24■□□□□ 0.35
DPPA4-202ENST00000463966 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.19■□□□□ 0.34
DPPA4-202ENST00000463966 HNRNPUL2Q1KMD3 747 aaKnown RBP17.19■□□□□ 0.34
DPPA4-202ENST00000463966 MYCNP04198 464 aaPredicted RBP17.18■□□□□ 0.34
DPPA4-202ENST00000463966 ZBTB22O15209 634 aa17.14■□□□□ 0.33
DPPA4-202ENST00000463966 SAMD1Q6SPF0 538 aaPredicted RBP17.1■□□□□ 0.33
DPPA4-202ENST00000463966 CADPSQ9ULU8 1353 aa17.09■□□□□ 0.33
DPPA4-202ENST00000463966 APLP2Q06481 763 aa17.08■□□□□ 0.32
DPPA4-202ENST00000463966 CFTRP13569 1480 aa17.06■□□□□ 0.32
DPPA4-202ENST00000463966 SPINK5Q9NQ38 1064 aaPredicted RBP17.05■□□□□ 0.32
DPPA4-202ENST00000463966 LAMC3Q9Y6N6 1575 aa17.05■□□□□ 0.32
DPPA4-202ENST00000463966 CAPN15O75808 1086 aa16.99■□□□□ 0.31
DPPA4-202ENST00000463966 PDS5BQ9NTI5 1447 aa16.95■□□□□ 0.3
DPPA4-202ENST00000463966 NESP48681 1621 aa16.94■□□□□ 0.3
DPPA4-202ENST00000463966 PRDM2Q13029 1718 aa16.91■□□□□ 0.3
DPPA4-202ENST00000463966 ZNF219Q9P2Y4 722 aaPredicted RBP16.88■□□□□ 0.29
DPPA4-202ENST00000463966 FANCD2Q9BXW9 1451 aa16.86■□□□□ 0.29
DPPA4-202ENST00000463966 TRHP20396 242 aaPredicted RBP16.83■□□□□ 0.28
DPPA4-202ENST00000463966 DSG3P32926 999 aa16.82■□□□□ 0.28
DPPA4-202ENST00000463966 CEP164Q9UPV0 1460 aa16.81■□□□□ 0.28
DPPA4-202ENST00000463966 CSRNP3Q8WYN3 585 aa16.8■□□□□ 0.28
DPPA4-202ENST00000463966 ERCC6Q03468 1493 aa16.79■□□□□ 0.28
DPPA4-202ENST00000463966 EHMT2Q96KQ7 1210 aa16.77■□□□□ 0.28
DPPA4-202ENST00000463966 KIF21AQ7Z4S6 1674 aa16.75■□□□□ 0.27
DPPA4-202ENST00000463966 ABCC8Q09428 1581 aa16.74■□□□□ 0.27
DPPA4-202ENST00000463966 ATXN8OSP0DMR3 200 aa16.74■□□□□ 0.27
DPPA4-202ENST00000463966 WRNQ14191 1432 aaPredicted RBP eCLIP16.71■□□□□ 0.27
DPPA4-202ENST00000463966 MRC2Q9UBG0 1479 aa16.71■□□□□ 0.27
DPPA4-202ENST00000463966 ATF5Q9Y2D1 282 aaPredicted RBP16.7■□□□□ 0.26
DPPA4-202ENST00000463966 DNMBPQ6XZF7 1577 aa16.66■□□□□ 0.26
DPPA4-202ENST00000463966 URB2Q14146 1524 aaKnown RBP16.64■□□□□ 0.25
DPPA4-202ENST00000463966 TRIM41Q8WV44 630 aa16.63■□□□□ 0.25
DPPA4-202ENST00000463966 WDR62O43379 1518 aa16.63■□□□□ 0.25
DPPA4-202ENST00000463966 CUX1P39880 1505 aa16.63■□□□□ 0.25
DPPA4-202ENST00000463966 TOPBP1Q92547 1522 aa16.63■□□□□ 0.25
DPPA4-202ENST00000463966 TOP2BQ02880 1626 aa16.63■□□□□ 0.25
DPPA4-202ENST00000463966 ABCB7O75027 752 aa16.62■□□□□ 0.25
DPPA4-202ENST00000463966 THOC2Q8NI27 1593 aaKnown RBP16.62■□□□□ 0.25
DPPA4-202ENST00000463966 BIVM-ERCC5R4GMW8 1640 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms