RNA–Protein interactions for RNA: ENST00000463095.2

PCDH15-221, Transcript of protocadherin related 15, humanhuman

TSL 1 (best)

Gene PCDH15, Length 3,469 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-221ENST00000463095 NISCHQ9Y2I1 1504 aa16.76■□□□□ 0.27
PCDH15-221ENST00000463095 HRCP23327 699 aa14.52□□□□□ -0.08
PCDH15-221ENST00000463095 MYO15BQ96JP2 1530 aa14.38□□□□□ -0.11
PCDH15-221ENST00000463095 ZCCHC6Q5VYS8 1495 aaKnown RBP14.35□□□□□ -0.11
PCDH15-221ENST00000463095 CCDC180Q9P1Z9 1646 aa14.28□□□□□ -0.12
PCDH15-221ENST00000463095 DCAF1Q9Y4B6 1507 aa14.25□□□□□ -0.13
PCDH15-221ENST00000463095 CHIC1Q5VXU3 224 aa14.11□□□□□ -0.15
PCDH15-221ENST00000463095 SHROOM4Q9ULL8 1493 aa14.02□□□□□ -0.16
PCDH15-221ENST00000463095 PELP1Q8IZL8 1130 aaKnown RBP14.01□□□□□ -0.17
PCDH15-221ENST00000463095 PPARGC1BQ86YN6 1023 aaKnown RBP13.92□□□□□ -0.18
PCDH15-221ENST00000463095 SUPT5HO00267 1087 aaKnown RBP13.91□□□□□ -0.18
PCDH15-221ENST00000463095 PCGF6Q9BYE7 350 aa13.9□□□□□ -0.18
PCDH15-221ENST00000463095 TRIM26Q12899 539 aaPredicted RBP13.74□□□□□ -0.21
PCDH15-221ENST00000463095 ABCC9O60706 1549 aa13.68□□□□□ -0.22
PCDH15-221ENST00000463095 ZEB1P37275 1124 aaPredicted RBP13.67□□□□□ -0.22
PCDH15-221ENST00000463095 SCAF1Q9H7N4 1312 aaKnown RBP13.65□□□□□ -0.22
PCDH15-221ENST00000463095 LOC105371045A0A1W2PR82 267 aa13.53□□□□□ -0.24
PCDH15-221ENST00000463095 MYT1Q01538 1121 aa13.49□□□□□ -0.25
PCDH15-221ENST00000463095 RB1CC1Q8TDY2 1594 aa13.42□□□□□ -0.26
PCDH15-221ENST00000463095 RSF1Q96T23 1441 aaPredicted RBP13.36□□□□□ -0.27
PCDH15-221ENST00000463095 EIF4G1Q04637 1599 aaKnown RBP13.35□□□□□ -0.27
PCDH15-221ENST00000463095 ACIN1Q9UKV3 1341 aaKnown RBP13.33□□□□□ -0.28
PCDH15-221ENST00000463095 NEUROD1Q13562 356 aa13.22□□□□□ -0.29
PCDH15-221ENST00000463095 WRNQ14191 1432 aaPredicted RBP eCLIP13.21□□□□□ -0.29
PCDH15-221ENST00000463095 TRIM41Q8WV44 630 aa13.11□□□□□ -0.31
PCDH15-221ENST00000463095 BAZ1AQ9NRL2 1556 aaPredicted RBP13.07□□□□□ -0.32
PCDH15-221ENST00000463095 SCRIBQ14160 1630 aa13.06□□□□□ -0.32
PCDH15-221ENST00000463095 GTF3C3Q9Y5Q9 886 aa13.06□□□□□ -0.32
PCDH15-221ENST00000463095 NACADO15069 1562 aa13□□□□□ -0.33
PCDH15-221ENST00000463095 CENPBP07199 599 aaPredicted RBP13□□□□□ -0.33
PCDH15-221ENST00000463095 DIEXFQ68CQ4 756 aaKnown RBP13□□□□□ -0.33
PCDH15-221ENST00000463095 WIZO95785 1651 aa12.99□□□□□ -0.33
PCDH15-221ENST00000463095 MROH2BQ7Z745 1585 aa12.99□□□□□ -0.33
PCDH15-221ENST00000463095 CECR2Q9BXF3 1484 aa12.9□□□□□ -0.34
PCDH15-221ENST00000463095 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.89□□□□□ -0.35
PCDH15-221ENST00000463095 TNIKQ9UKE5 1360 aa12.86□□□□□ -0.35
PCDH15-221ENST00000463095 DCAF8L2P0C7V8 631 aa12.86□□□□□ -0.35
PCDH15-221ENST00000463095 ZNF316A6NFI3 1004 aaPredicted RBP12.85□□□□□ -0.35
PCDH15-221ENST00000463095 TOP2AP11388 1531 aaKnown RBP12.84□□□□□ -0.35
PCDH15-221ENST00000463095 CEP162Q5TB80 1403 aa12.84□□□□□ -0.35
PCDH15-221ENST00000463095 CCER1Q8TC90 406 aaPredicted RBP12.84□□□□□ -0.35
PCDH15-221ENST00000463095 EEA1Q15075 1411 aa12.83□□□□□ -0.36
PCDH15-221ENST00000463095 CLSPNQ9HAW4 1339 aa12.82□□□□□ -0.36
PCDH15-221ENST00000463095 SMARCA2P51531 1590 aa12.8□□□□□ -0.36
PCDH15-221ENST00000463095 KIF21BO75037 1637 aa12.79□□□□□ -0.36
PCDH15-221ENST00000463095 TTBK1Q5TCY1 1321 aaPredicted RBP12.79□□□□□ -0.36
PCDH15-221ENST00000463095 CCDC88BA6NC98 1476 aa12.78□□□□□ -0.36
PCDH15-221ENST00000463095 ABCC8Q09428 1581 aa12.76□□□□□ -0.37
PCDH15-221ENST00000463095 FAM9AQ8IZU1 332 aaPredicted RBP12.73□□□□□ -0.37
PCDH15-221ENST00000463095 SMARCA4P51532 1647 aa12.71□□□□□ -0.37
PCDH15-221ENST00000463095 MIER1Q8N108 512 aa12.69□□□□□ -0.38
PCDH15-221ENST00000463095 GOLGA3Q08378 1498 aa12.67□□□□□ -0.38
PCDH15-221ENST00000463095 SOGA1O94964 1423 aa12.66□□□□□ -0.38
PCDH15-221ENST00000463095 PEG3Q9GZU2 1588 aa12.65□□□□□ -0.38
PCDH15-221ENST00000463095 CUX2O14529 1486 aa12.65□□□□□ -0.39
PCDH15-221ENST00000463095 BAZ1BQ9UIG0 1483 aaKnown RBP12.64□□□□□ -0.39
PCDH15-221ENST00000463095 UNC13AQ9UPW8 1703 aa12.64□□□□□ -0.39
PCDH15-221ENST00000463095 RUSC2Q8N2Y8 1516 aa12.61□□□□□ -0.39
PCDH15-221ENST00000463095 SUPT16HQ9Y5B9 1047 aaKnown RBP12.58□□□□□ -0.39
PCDH15-221ENST00000463095 VPS8Q8N3P4 1428 aa12.57□□□□□ -0.4
PCDH15-221ENST00000463095 CEP164Q9UPV0 1460 aa12.57□□□□□ -0.4
PCDH15-221ENST00000463095 ANP32EQ9BTT0 268 aa12.55□□□□□ -0.4
PCDH15-221ENST00000463095 TSHZ2Q9NRE2 1034 aa12.54□□□□□ -0.4
PCDH15-221ENST00000463095 CLIP1P30622 1438 aa12.54□□□□□ -0.4
PCDH15-221ENST00000463095 SYNJ1O43426 1573 aa12.53□□□□□ -0.4
PCDH15-221ENST00000463095 CSRNP3Q8WYN3 585 aa12.51□□□□□ -0.41
PCDH15-221ENST00000463095 DHX57Q6P158 1386 aaKnown RBP12.51□□□□□ -0.41
PCDH15-221ENST00000463095 ERICH3Q5RHP9 1530 aa12.47□□□□□ -0.41
PCDH15-221ENST00000463095 RRBP1Q9P2E9 1410 aaKnown RBP12.47□□□□□ -0.41
PCDH15-221ENST00000463095 BIVM-ERCC5R4GMW8 1640 aa12.47□□□□□ -0.41
PCDH15-221ENST00000463095 YTHDC1Q96MU7 727 aaKnown RBP12.43□□□□□ -0.42
PCDH15-221ENST00000463095 BCL11AQ9H165 835 aa12.43□□□□□ -0.42
PCDH15-221ENST00000463095 TOP2BQ02880 1626 aa12.42□□□□□ -0.42
PCDH15-221ENST00000463095 EHMT2Q96KQ7 1210 aa12.41□□□□□ -0.42
PCDH15-221ENST00000463095 MAPKBP1O60336 1514 aa12.39□□□□□ -0.43
PCDH15-221ENST00000463095 ARAP1Q96P48 1450 aa12.39□□□□□ -0.43
PCDH15-221ENST00000463095 RAPGEF2Q9Y4G8 1499 aa12.37□□□□□ -0.43
PCDH15-221ENST00000463095 PRXQ9BXM0 1461 aa12.36□□□□□ -0.43
PCDH15-221ENST00000463095 MAP3K1Q13233 1512 aa12.35□□□□□ -0.43
PCDH15-221ENST00000463095 BICRAQ9NZM4 1560 aa12.32□□□□□ -0.44
PCDH15-221ENST00000463095 HNRNPUL2Q1KMD3 747 aaKnown RBP12.24□□□□□ -0.45
PCDH15-221ENST00000463095 UBTFP17480 764 aaKnown RBP12.23□□□□□ -0.45
PCDH15-221ENST00000463095 CFAP43Q8NDM7 1665 aa12.23□□□□□ -0.45
PCDH15-221ENST00000463095 WDR97A6NE52 1622 aa12.22□□□□□ -0.45
PCDH15-221ENST00000463095 PRDM2Q13029 1718 aa12.2□□□□□ -0.46
PCDH15-221ENST00000463095 RBM19Q9Y4C8 960 aaKnown RBP12.19□□□□□ -0.46
PCDH15-221ENST00000463095 FANCIQ9NVI1 1328 aa12.19□□□□□ -0.46
PCDH15-221ENST00000463095 PPP1R15AO75807 674 aaPredicted RBP12.19□□□□□ -0.46
PCDH15-221ENST00000463095 TIAM1Q13009 1591 aa12.19□□□□□ -0.46
PCDH15-221ENST00000463095 CCER2I3L3R5 266 aa12.16□□□□□ -0.46
PCDH15-221ENST00000463095 MSH5O43196 834 aa12.16□□□□□ -0.46
PCDH15-221ENST00000463095 ARHGAP35Q9NRY4 1499 aa12.16□□□□□ -0.46
PCDH15-221ENST00000463095 CCNB3Q8WWL7 1395 aa12.16□□□□□ -0.46
PCDH15-221ENST00000463095 TIMELESSQ9UNS1 1208 aa12.15□□□□□ -0.46
PCDH15-221ENST00000463095 ATAD2BQ9ULI0 1458 aa12.15□□□□□ -0.46
PCDH15-221ENST00000463095 KCNH8Q96L42 1107 aa12.14□□□□□ -0.47
PCDH15-221ENST00000463095 KDM5BQ9UGL1 1544 aa12.14□□□□□ -0.47
PCDH15-221ENST00000463095 KANK4Q5T7N3 995 aaPredicted RBP12.12□□□□□ -0.47
PCDH15-221ENST00000463095 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.11□□□□□ -0.47
PCDH15-221ENST00000463095 RAB3GAP2Q9H2M9 1393 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms