RNA–Protein interactions for RNA: ENST00000461177.1

NIPSNAP3B-203, Transcript of nipsnap homolog 3B, humanhuman

TSL 3

Gene NIPSNAP3B, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3B-203ENST00000461177 AEBP2Q6ZN18 517 aaPredicted RBP23.45■■□□□ 1.34
NIPSNAP3B-203ENST00000461177 CHIC1Q5VXU3 224 aa21.96■■□□□ 1.11
NIPSNAP3B-203ENST00000461177 SENP3Q9H4L4 574 aaPredicted RBP20.15■□□□□ 0.82
NIPSNAP3B-203ENST00000461177 NISCHQ9Y2I1 1504 aa19.95■□□□□ 0.78
NIPSNAP3B-203ENST00000461177 PHF23Q9BUL5 403 aaPredicted RBP19.8■□□□□ 0.76
NIPSNAP3B-203ENST00000461177 FOXD1Q16676 465 aa18.85■□□□□ 0.61
NIPSNAP3B-203ENST00000461177 POTEDQ86YR6 584 aa18.66■□□□□ 0.58
NIPSNAP3B-203ENST00000461177 MSH5O43196 834 aa17.93■□□□□ 0.46
NIPSNAP3B-203ENST00000461177 CCDC180Q9P1Z9 1646 aa17.56■□□□□ 0.4
NIPSNAP3B-203ENST00000461177 PIAS4Q8N2W9 510 aaPredicted RBP17.47■□□□□ 0.39
NIPSNAP3B-203ENST00000461177 ABCC9O60706 1549 aa17.11■□□□□ 0.33
NIPSNAP3B-203ENST00000461177 PPP6R1Q9UPN7 881 aa17.1■□□□□ 0.33
NIPSNAP3B-203ENST00000461177 ADRA2BP18089 450 aa17.02■□□□□ 0.32
NIPSNAP3B-203ENST00000461177 PLPPR3Q6T4P5 718 aa16.98■□□□□ 0.31
NIPSNAP3B-203ENST00000461177 DCAF8L2P0C7V8 631 aa16.71■□□□□ 0.27
NIPSNAP3B-203ENST00000461177 ZCCHC6Q5VYS8 1495 aaKnown RBP16.67■□□□□ 0.26
NIPSNAP3B-203ENST00000461177 NACADO15069 1562 aa16.51■□□□□ 0.23
NIPSNAP3B-203ENST00000461177 RB1CC1Q8TDY2 1594 aa16.48■□□□□ 0.23
NIPSNAP3B-203ENST00000461177 DCAF1Q9Y4B6 1507 aa16.48■□□□□ 0.23
NIPSNAP3B-203ENST00000461177 MYO15BQ96JP2 1530 aa16.46■□□□□ 0.23
NIPSNAP3B-203ENST00000461177 SCRIBQ14160 1630 aa16.14■□□□□ 0.17
NIPSNAP3B-203ENST00000461177 PABPN1Q86U42 306 aaKnown RBP eCLIP16.07■□□□□ 0.16
NIPSNAP3B-203ENST00000461177 SHROOM4Q9ULL8 1493 aa16.01■□□□□ 0.15
NIPSNAP3B-203ENST00000461177 UNC13AQ9UPW8 1703 aa15.99■□□□□ 0.15
NIPSNAP3B-203ENST00000461177 BICRAQ9NZM4 1560 aa15.96■□□□□ 0.14
NIPSNAP3B-203ENST00000461177 MAPK8IP2Q13387 824 aaPredicted RBP15.85■□□□□ 0.13
NIPSNAP3B-203ENST00000461177 DMRT2Q9Y5R5 561 aa15.85■□□□□ 0.13
NIPSNAP3B-203ENST00000461177 CACNB1Q02641 598 aaPredicted RBP15.84■□□□□ 0.13
NIPSNAP3B-203ENST00000461177 SCAF1Q9H7N4 1312 aaKnown RBP15.62■□□□□ 0.09
NIPSNAP3B-203ENST00000461177 EIF4G1Q04637 1599 aaKnown RBP15.54■□□□□ 0.08
NIPSNAP3B-203ENST00000461177 CECR2Q9BXF3 1484 aa15.54■□□□□ 0.08
NIPSNAP3B-203ENST00000461177 DNAJC5BQ9UF47 199 aa15.5■□□□□ 0.07
NIPSNAP3B-203ENST00000461177 BAZ1AQ9NRL2 1556 aaPredicted RBP15.45■□□□□ 0.06
NIPSNAP3B-203ENST00000461177 CC2D2AQ9P2K1 1620 aa15.42■□□□□ 0.06
NIPSNAP3B-203ENST00000461177 SMARCA4P51532 1647 aa15.41■□□□□ 0.06
NIPSNAP3B-203ENST00000461177 MROH2BQ7Z745 1585 aa15.4■□□□□ 0.06
NIPSNAP3B-203ENST00000461177 DCAF8L1A6NGE4 600 aa15.32■□□□□ 0.04
NIPSNAP3B-203ENST00000461177 RSF1Q96T23 1441 aaPredicted RBP15.32■□□□□ 0.04
NIPSNAP3B-203ENST00000461177 ATAD2BQ9ULI0 1458 aa15.31■□□□□ 0.04
NIPSNAP3B-203ENST00000461177 SMARCA2P51531 1590 aa15.28■□□□□ 0.04
NIPSNAP3B-203ENST00000461177 NCAPD3P42695 1498 aa15.26■□□□□ 0.03
NIPSNAP3B-203ENST00000461177 PEG3Q9GZU2 1588 aa15.24■□□□□ 0.03
NIPSNAP3B-203ENST00000461177 BAZ1BQ9UIG0 1483 aaKnown RBP15.21■□□□□ 0.03
NIPSNAP3B-203ENST00000461177 RNF39Q9H2S5 420 aa15.21■□□□□ 0.03
NIPSNAP3B-203ENST00000461177 WIZO95785 1651 aa15.2■□□□□ 0.02
NIPSNAP3B-203ENST00000461177 SUPT5HO00267 1087 aaKnown RBP15.18■□□□□ 0.02
NIPSNAP3B-203ENST00000461177 HMGXB3Q12766 1538 aa15.17■□□□□ 0.02
NIPSNAP3B-203ENST00000461177 KCNA4P22459 653 aa15.13■□□□□ 0.01
NIPSNAP3B-203ENST00000461177 TOP2AP11388 1531 aaKnown RBP15.08■□□□□ 0.01
NIPSNAP3B-203ENST00000461177 EHMT2Q96KQ7 1210 aa15.02■□□□□ -0
NIPSNAP3B-203ENST00000461177 HOXD11P31277 338 aaPredicted RBP14.99□□□□□ -0.01
NIPSNAP3B-203ENST00000461177 C1QBPQ07021 282 aaKnown RBP14.97□□□□□ -0.01
NIPSNAP3B-203ENST00000461177 CCDC88BA6NC98 1476 aa14.92□□□□□ -0.02
NIPSNAP3B-203ENST00000461177 CADPSQ9ULU8 1353 aa14.85□□□□□ -0.03
NIPSNAP3B-203ENST00000461177 NESP48681 1621 aa14.85□□□□□ -0.03
NIPSNAP3B-203ENST00000461177 PPP4R3CPQ6ZMV5 832 aa14.8□□□□□ -0.04
NIPSNAP3B-203ENST00000461177 CFTRP13569 1480 aa14.79□□□□□ -0.04
NIPSNAP3B-203ENST00000461177 LAMC3Q9Y6N6 1575 aa14.79□□□□□ -0.04
NIPSNAP3B-203ENST00000461177 ERCC6Q03468 1493 aa14.75□□□□□ -0.05
NIPSNAP3B-203ENST00000461177 PDS5BQ9NTI5 1447 aa14.75□□□□□ -0.05
NIPSNAP3B-203ENST00000461177 RNF216Q9NWF9 866 aaPredicted RBP14.71□□□□□ -0.05
NIPSNAP3B-203ENST00000461177 FANCD2Q9BXW9 1451 aa14.69□□□□□ -0.06
NIPSNAP3B-203ENST00000461177 CNKSR2Q8WXI2 1034 aa14.68□□□□□ -0.06
NIPSNAP3B-203ENST00000461177 CEP164Q9UPV0 1460 aa14.64□□□□□ -0.07
NIPSNAP3B-203ENST00000461177 KIF21AQ7Z4S6 1674 aa14.59□□□□□ -0.07
NIPSNAP3B-203ENST00000461177 MRC2Q9UBG0 1479 aa14.57□□□□□ -0.08
NIPSNAP3B-203ENST00000461177 PRDM2Q13029 1718 aa14.55□□□□□ -0.08
NIPSNAP3B-203ENST00000461177 CSRNP3Q8WYN3 585 aa14.52□□□□□ -0.09
NIPSNAP3B-203ENST00000461177 THOC2Q8NI27 1593 aaKnown RBP14.51□□□□□ -0.09
NIPSNAP3B-203ENST00000461177 URB2Q14146 1524 aaKnown RBP14.51□□□□□ -0.09
NIPSNAP3B-203ENST00000461177 POTEHQ6S545 545 aa14.5□□□□□ -0.09
NIPSNAP3B-203ENST00000461177 SLC4A1APQ9BWU0 796 aaKnown RBP14.49□□□□□ -0.09
NIPSNAP3B-203ENST00000461177 WDR62O43379 1518 aa14.48□□□□□ -0.09
NIPSNAP3B-203ENST00000461177 TOPBP1Q92547 1522 aa14.46□□□□□ -0.1
NIPSNAP3B-203ENST00000461177 CUX2O14529 1486 aa14.45□□□□□ -0.1
NIPSNAP3B-203ENST00000461177 ABCC8Q09428 1581 aa14.45□□□□□ -0.1
NIPSNAP3B-203ENST00000461177 WRNQ14191 1432 aaPredicted RBP eCLIP14.44□□□□□ -0.1
NIPSNAP3B-203ENST00000461177 DNMBPQ6XZF7 1577 aa14.43□□□□□ -0.1
NIPSNAP3B-203ENST00000461177 CUX1P39880 1505 aa14.43□□□□□ -0.1
NIPSNAP3B-203ENST00000461177 FGD5Q6ZNL6 1462 aa14.36□□□□□ -0.11
NIPSNAP3B-203ENST00000461177 SYNJ1O43426 1573 aa14.35□□□□□ -0.11
NIPSNAP3B-203ENST00000461177 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.35□□□□□ -0.11
NIPSNAP3B-203ENST00000461177 POLA1P09884 1462 aaPredicted RBP14.35□□□□□ -0.11
NIPSNAP3B-203ENST00000461177 TOP2BQ02880 1626 aa14.33□□□□□ -0.12
NIPSNAP3B-203ENST00000461177 SOGA1O94964 1423 aa14.32□□□□□ -0.12
NIPSNAP3B-203ENST00000461177 IFT140Q96RY7 1462 aa14.32□□□□□ -0.12
NIPSNAP3B-203ENST00000461177 RAD54L2Q9Y4B4 1467 aa14.31□□□□□ -0.12
NIPSNAP3B-203ENST00000461177 TRIM41Q8WV44 630 aa14.3□□□□□ -0.12
NIPSNAP3B-203ENST00000461177 BIVM-ERCC5R4GMW8 1640 aa14.3□□□□□ -0.12
NIPSNAP3B-203ENST00000461177 NCBP3Q53F19 620 aaKnown RBP14.29□□□□□ -0.12
NIPSNAP3B-203ENST00000461177 ZNF608Q9ULD9 1512 aaPredicted RBP14.25□□□□□ -0.13
NIPSNAP3B-203ENST00000461177 TDRD9Q8NDG6 1382 aaKnown RBP14.24□□□□□ -0.13
NIPSNAP3B-203ENST00000461177 TARBP1Q13395 1621 aaKnown RBP14.23□□□□□ -0.13
NIPSNAP3B-203ENST00000461177 ABCA10Q8WWZ4 1543 aa14.21□□□□□ -0.13
NIPSNAP3B-203ENST00000461177 AQRO60306 1485 aaKnown RBP eCLIP14.21□□□□□ -0.13
NIPSNAP3B-203ENST00000461177 NPM3O75607 178 aaKnown RBP14.19□□□□□ -0.14
NIPSNAP3B-203ENST00000461177 EIF4G3O43432 1585 aaKnown RBP14.16□□□□□ -0.14
NIPSNAP3B-203ENST00000461177 GAPVD1Q14C86 1478 aa14.15□□□□□ -0.14
NIPSNAP3B-203ENST00000461177 KIF27Q86VH2 1401 aa14.14□□□□□ -0.15
NIPSNAP3B-203ENST00000461177 WDR97A6NE52 1622 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms