RNA–Protein interactions for RNA: ENST00000460783.1

SIM2-203, Transcript of SIM bHLH transcription factor 2, humanhuman

TSL 1 (best)

Gene SIM2, Length 2,235 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM2-203ENST00000460783 NISCHQ9Y2I1 1504 aa50.85■■■■■ 5.73
SIM2-203ENST00000460783 CCDC180Q9P1Z9 1646 aa43.37■■■■■ 4.53
SIM2-203ENST00000460783 ZCCHC6Q5VYS8 1495 aaKnown RBP43.02■■■■■ 4.48
SIM2-203ENST00000460783 SHROOM4Q9ULL8 1493 aa43■■■■■ 4.47
SIM2-203ENST00000460783 SUPT5HO00267 1087 aaKnown RBP42.12■■■■■ 4.33
SIM2-203ENST00000460783 DCAF1Q9Y4B6 1507 aa41.84■■■■■ 4.29
SIM2-203ENST00000460783 DCAF8L2P0C7V8 631 aa41.8■■■■■ 4.28
SIM2-203ENST00000460783 CHIC1Q5VXU3 224 aa41.09■■■■■ 4.17
SIM2-203ENST00000460783 MYO15BQ96JP2 1530 aa40.94■■■■■ 4.14
SIM2-203ENST00000460783 ABCC9O60706 1549 aa40.58■■■■■ 4.09
SIM2-203ENST00000460783 SCRIBQ14160 1630 aa40.45■■■■■ 4.07
SIM2-203ENST00000460783 RSF1Q96T23 1441 aaPredicted RBP40.17■■■■■ 4.02
SIM2-203ENST00000460783 NACADO15069 1562 aa40.06■■■■■ 4
SIM2-203ENST00000460783 LOC105371045A0A1W2PR82 267 aa39.76■■■■□ 3.96
SIM2-203ENST00000460783 RB1CC1Q8TDY2 1594 aa39.75■■■■□ 3.95
SIM2-203ENST00000460783 HRCP23327 699 aa39.66■■■■□ 3.94
SIM2-203ENST00000460783 CECR2Q9BXF3 1484 aa39.6■■■■□ 3.93
SIM2-203ENST00000460783 PCGF6Q9BYE7 350 aa39.59■■■■□ 3.93
SIM2-203ENST00000460783 MROH2BQ7Z745 1585 aa39.49■■■■□ 3.91
SIM2-203ENST00000460783 TRIM41Q8WV44 630 aa39.32■■■■□ 3.88
SIM2-203ENST00000460783 WIZO95785 1651 aa39.27■■■■□ 3.88
SIM2-203ENST00000460783 BAZ1AQ9NRL2 1556 aaPredicted RBP39.08■■■■□ 3.85
SIM2-203ENST00000460783 TRIM26Q12899 539 aaPredicted RBP38.97■■■■□ 3.83
SIM2-203ENST00000460783 FAM9AQ8IZU1 332 aaPredicted RBP38.88■■■■□ 3.81
SIM2-203ENST00000460783 UNC13AQ9UPW8 1703 aa38.86■■■■□ 3.81
SIM2-203ENST00000460783 EIF4G1Q04637 1599 aaKnown RBP38.85■■■■□ 3.81
SIM2-203ENST00000460783 SMARCA4P51532 1647 aa38.75■■■■□ 3.79
SIM2-203ENST00000460783 PPARGC1BQ86YN6 1023 aaKnown RBP38.74■■■■□ 3.79
SIM2-203ENST00000460783 TOP2AP11388 1531 aaKnown RBP38.7■■■■□ 3.79
SIM2-203ENST00000460783 SMARCA2P51531 1590 aa38.49■■■■□ 3.75
SIM2-203ENST00000460783 CCDC88BA6NC98 1476 aa38.49■■■■□ 3.75
SIM2-203ENST00000460783 EHMT2Q96KQ7 1210 aa38.43■■■■□ 3.74
SIM2-203ENST00000460783 BICRAQ9NZM4 1560 aa38.36■■■■□ 3.73
SIM2-203ENST00000460783 ABCC8Q09428 1581 aa38.31■■■■□ 3.72
SIM2-203ENST00000460783 PABPN1Q86U42 306 aaKnown RBP eCLIP38.15■■■■□ 3.7
SIM2-203ENST00000460783 PEG3Q9GZU2 1588 aa38.1■■■■□ 3.69
SIM2-203ENST00000460783 ZEB1P37275 1124 aaPredicted RBP38.08■■■■□ 3.69
SIM2-203ENST00000460783 SOGA1O94964 1423 aa37.94■■■■□ 3.66
SIM2-203ENST00000460783 EEA1Q15075 1411 aa37.82■■■■□ 3.64
SIM2-203ENST00000460783 WRNQ14191 1432 aaPredicted RBP eCLIP37.78■■■■□ 3.64
SIM2-203ENST00000460783 RUSC2Q8N2Y8 1516 aa37.76■■■■□ 3.63
SIM2-203ENST00000460783 ATAD2BQ9ULI0 1458 aa37.74■■■■□ 3.63
SIM2-203ENST00000460783 CEP162Q5TB80 1403 aa37.73■■■■□ 3.63
SIM2-203ENST00000460783 TNIKQ9UKE5 1360 aa37.73■■■■□ 3.63
SIM2-203ENST00000460783 CSRNP3Q8WYN3 585 aa37.69■■■■□ 3.62
SIM2-203ENST00000460783 BAZ1BQ9UIG0 1483 aaKnown RBP37.59■■■■□ 3.61
SIM2-203ENST00000460783 SYNJ1O43426 1573 aa37.57■■■■□ 3.6
SIM2-203ENST00000460783 GOLGA3Q08378 1498 aa37.51■■■■□ 3.59
SIM2-203ENST00000460783 UBTFP17480 764 aaKnown RBP37.42■■■■□ 3.58
SIM2-203ENST00000460783 KIF21BO75037 1637 aa37.34■■■■□ 3.57
SIM2-203ENST00000460783 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.34■■■■□ 3.57
SIM2-203ENST00000460783 CEP164Q9UPV0 1460 aa37.31■■■■□ 3.56
SIM2-203ENST00000460783 CCER1Q8TC90 406 aaPredicted RBP37.22■■■■□ 3.55
SIM2-203ENST00000460783 TTBK1Q5TCY1 1321 aaPredicted RBP37.2■■■■□ 3.55
SIM2-203ENST00000460783 TOP2BQ02880 1626 aa37.15■■■■□ 3.54
SIM2-203ENST00000460783 HMGXB3Q12766 1538 aa37.07■■■■□ 3.53
SIM2-203ENST00000460783 NCAPD3P42695 1498 aa37.06■■■■□ 3.52
SIM2-203ENST00000460783 BIVM-ERCC5R4GMW8 1640 aa37.05■■■■□ 3.52
SIM2-203ENST00000460783 CLIP1P30622 1438 aa37.04■■■■□ 3.52
SIM2-203ENST00000460783 RAPGEF2Q9Y4G8 1499 aa37.04■■■■□ 3.52
SIM2-203ENST00000460783 VPS8Q8N3P4 1428 aa36.92■■■■□ 3.5
SIM2-203ENST00000460783 CUX1P39880 1505 aa36.78■■■■□ 3.48
SIM2-203ENST00000460783 PRXQ9BXM0 1461 aa36.76■■■■□ 3.48
SIM2-203ENST00000460783 ERICH3Q5RHP9 1530 aa36.76■■■■□ 3.48
SIM2-203ENST00000460783 CFTRP13569 1480 aa36.73■■■■□ 3.47
SIM2-203ENST00000460783 RANGAP1P46060 587 aaPredicted RBP36.55■■■■□ 3.44
SIM2-203ENST00000460783 APLP2Q06481 763 aa36.55■■■■□ 3.44
SIM2-203ENST00000460783 KIF27Q86VH2 1401 aa36.54■■■■□ 3.44
SIM2-203ENST00000460783 HNRNPUL2Q1KMD3 747 aaKnown RBP36.53■■■■□ 3.44
SIM2-203ENST00000460783 ARAP1Q96P48 1450 aa36.52■■■■□ 3.44
SIM2-203ENST00000460783 PRDM2Q13029 1718 aa36.51■■■■□ 3.44
SIM2-203ENST00000460783 DIEXFQ68CQ4 756 aaKnown RBP36.48■■■■□ 3.43
SIM2-203ENST00000460783 SCAF1Q9H7N4 1312 aaKnown RBP36.43■■■■□ 3.42
SIM2-203ENST00000460783 ZNF316A6NFI3 1004 aaPredicted RBP36.28■■■■□ 3.4
SIM2-203ENST00000460783 CADPSQ9ULU8 1353 aa36.28■■■■□ 3.4
SIM2-203ENST00000460783 ARHGAP35Q9NRY4 1499 aa36.22■■■■□ 3.39
SIM2-203ENST00000460783 KANK4Q5T7N3 995 aaPredicted RBP36.22■■■■□ 3.39
SIM2-203ENST00000460783 CUX2O14529 1486 aa36.18■■■■□ 3.38
SIM2-203ENST00000460783 IGF1RP08069 1367 aa36.17■■■■□ 3.38
SIM2-203ENST00000460783 ACIN1Q9UKV3 1341 aaKnown RBP36.15■■■■□ 3.38
SIM2-203ENST00000460783 FGD5Q6ZNL6 1462 aa36.1■■■■□ 3.37
SIM2-203ENST00000460783 CC2D2AQ9P2K1 1620 aa36.1■■■■□ 3.37
SIM2-203ENST00000460783 NEUROD1Q13562 356 aa36.09■■■■□ 3.37
SIM2-203ENST00000460783 RRBP1Q9P2E9 1410 aaKnown RBP36.08■■■■□ 3.37
SIM2-203ENST00000460783 CARMIL1Q5VZK9 1371 aa35.98■■■■□ 3.35
SIM2-203ENST00000460783 DHX57Q6P158 1386 aaKnown RBP35.97■■■■□ 3.35
SIM2-203ENST00000460783 CLSPNQ9HAW4 1339 aa35.96■■■■□ 3.35
SIM2-203ENST00000460783 FANCD2Q9BXW9 1451 aa35.92■■■■□ 3.34
SIM2-203ENST00000460783 CENPBP07199 599 aaPredicted RBP35.91■■■■□ 3.34
SIM2-203ENST00000460783 CCNB3Q8WWL7 1395 aa35.86■■■■□ 3.33
SIM2-203ENST00000460783 MAP3K1Q13233 1512 aa35.86■■■■□ 3.33
SIM2-203ENST00000460783 TIAM1Q13009 1591 aa35.82■■■■□ 3.32
SIM2-203ENST00000460783 DNMBPQ6XZF7 1577 aa35.8■■■■□ 3.32
SIM2-203ENST00000460783 ABCA10Q8WWZ4 1543 aa35.73■■■■□ 3.31
SIM2-203ENST00000460783 MIER1Q8N108 512 aa35.73■■■■□ 3.31
SIM2-203ENST00000460783 TOPBP1Q92547 1522 aa35.72■■■■□ 3.31
SIM2-203ENST00000460783 RAD54L2Q9Y4B4 1467 aa35.71■■■■□ 3.31
SIM2-203ENST00000460783 POLA1P09884 1462 aaPredicted RBP35.69■■■■□ 3.3
SIM2-203ENST00000460783 LRRC9Q6ZRR7 1453 aa35.67■■■■□ 3.3
SIM2-203ENST00000460783 GTF3C3Q9Y5Q9 886 aa35.67■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms