RNA–Protein interactions for RNA: ENST00000459750.5

MCF2L2-204, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 3,090 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-204ENST00000459750 NISCHQ9Y2I1 1504 aa18.76■□□□□ 0.59
MCF2L2-204ENST00000459750 SHROOM4Q9ULL8 1493 aa16.57■□□□□ 0.24
MCF2L2-204ENST00000459750 DCAF8L2P0C7V8 631 aa16.53■□□□□ 0.24
MCF2L2-204ENST00000459750 SUPT5HO00267 1087 aaKnown RBP16.15■□□□□ 0.18
MCF2L2-204ENST00000459750 ZCCHC6Q5VYS8 1495 aaKnown RBP15.75■□□□□ 0.11
MCF2L2-204ENST00000459750 CCDC180Q9P1Z9 1646 aa15.73■□□□□ 0.11
MCF2L2-204ENST00000459750 ABCC9O60706 1549 aa15.49■□□□□ 0.07
MCF2L2-204ENST00000459750 CHIC1Q5VXU3 224 aa15.25■□□□□ 0.03
MCF2L2-204ENST00000459750 SCRIBQ14160 1630 aa15.24■□□□□ 0.03
MCF2L2-204ENST00000459750 EHMT2Q96KQ7 1210 aa15.22■□□□□ 0.03
MCF2L2-204ENST00000459750 MYO15BQ96JP2 1530 aa15.11■□□□□ 0.01
MCF2L2-204ENST00000459750 LOC105371045A0A1W2PR82 267 aa15.09■□□□□ 0.01
MCF2L2-204ENST00000459750 DCAF1Q9Y4B6 1507 aa15.06■□□□□ 0
MCF2L2-204ENST00000459750 FAM9AQ8IZU1 332 aaPredicted RBP15.06■□□□□ 0
MCF2L2-204ENST00000459750 PABPN1Q86U42 306 aaKnown RBP eCLIP14.99□□□□□ -0.01
MCF2L2-204ENST00000459750 CECR2Q9BXF3 1484 aa14.92□□□□□ -0.02
MCF2L2-204ENST00000459750 RSF1Q96T23 1441 aaPredicted RBP14.9□□□□□ -0.02
MCF2L2-204ENST00000459750 TRIM41Q8WV44 630 aa14.84□□□□□ -0.03
MCF2L2-204ENST00000459750 PCGF6Q9BYE7 350 aa14.82□□□□□ -0.04
MCF2L2-204ENST00000459750 NACADO15069 1562 aa14.75□□□□□ -0.05
MCF2L2-204ENST00000459750 RB1CC1Q8TDY2 1594 aa14.73□□□□□ -0.05
MCF2L2-204ENST00000459750 MROH2BQ7Z745 1585 aa14.73□□□□□ -0.05
MCF2L2-204ENST00000459750 PPARGC1BQ86YN6 1023 aaKnown RBP14.68□□□□□ -0.06
MCF2L2-204ENST00000459750 WIZO95785 1651 aa14.63□□□□□ -0.07
MCF2L2-204ENST00000459750 PELP1Q8IZL8 1130 aaKnown RBP14.62□□□□□ -0.07
MCF2L2-204ENST00000459750 TTBK1Q5TCY1 1321 aaPredicted RBP14.59□□□□□ -0.07
MCF2L2-204ENST00000459750 RANGAP1P46060 587 aaPredicted RBP14.44□□□□□ -0.1
MCF2L2-204ENST00000459750 MYT1Q01538 1121 aa14.4□□□□□ -0.1
MCF2L2-204ENST00000459750 UNC13AQ9UPW8 1703 aa14.39□□□□□ -0.11
MCF2L2-204ENST00000459750 BAZ1AQ9NRL2 1556 aaPredicted RBP14.38□□□□□ -0.11
MCF2L2-204ENST00000459750 ABCC8Q09428 1581 aa14.37□□□□□ -0.11
MCF2L2-204ENST00000459750 HRCP23327 699 aa14.34□□□□□ -0.11
MCF2L2-204ENST00000459750 CCDC88BA6NC98 1476 aa14.34□□□□□ -0.11
MCF2L2-204ENST00000459750 SMARCA4P51532 1647 aa14.31□□□□□ -0.12
MCF2L2-204ENST00000459750 BICRAQ9NZM4 1560 aa14.29□□□□□ -0.12
MCF2L2-204ENST00000459750 UBTFP17480 764 aaKnown RBP14.28□□□□□ -0.12
MCF2L2-204ENST00000459750 TRIM26Q12899 539 aaPredicted RBP14.27□□□□□ -0.13
MCF2L2-204ENST00000459750 SOGA1O94964 1423 aa14.22□□□□□ -0.13
MCF2L2-204ENST00000459750 TOP2AP11388 1531 aaKnown RBP14.2□□□□□ -0.14
MCF2L2-204ENST00000459750 RUSC2Q8N2Y8 1516 aa14.19□□□□□ -0.14
MCF2L2-204ENST00000459750 SMARCA2P51531 1590 aa14.18□□□□□ -0.14
MCF2L2-204ENST00000459750 BAZ1BQ9UIG0 1483 aaKnown RBP14.11□□□□□ -0.15
MCF2L2-204ENST00000459750 CSRNP3Q8WYN3 585 aa14.1□□□□□ -0.15
MCF2L2-204ENST00000459750 ATAD2BQ9ULI0 1458 aa14.1□□□□□ -0.15
MCF2L2-204ENST00000459750 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.08□□□□□ -0.16
MCF2L2-204ENST00000459750 WRNQ14191 1432 aaPredicted RBP eCLIP14.03□□□□□ -0.16
MCF2L2-204ENST00000459750 EIF4G1Q04637 1599 aaKnown RBP14.01□□□□□ -0.17
MCF2L2-204ENST00000459750 CEP162Q5TB80 1403 aa13.95□□□□□ -0.18
MCF2L2-204ENST00000459750 CCER1Q8TC90 406 aaPredicted RBP13.94□□□□□ -0.18
MCF2L2-204ENST00000459750 DNAJC5BQ9UF47 199 aa13.92□□□□□ -0.18
MCF2L2-204ENST00000459750 HNRNPUL2Q1KMD3 747 aaKnown RBP13.92□□□□□ -0.18
MCF2L2-204ENST00000459750 SYNJ1O43426 1573 aa13.92□□□□□ -0.18
MCF2L2-204ENST00000459750 APLP2Q06481 763 aa13.82□□□□□ -0.2
MCF2L2-204ENST00000459750 ATP1B4Q9UN42 357 aaPredicted RBP13.82□□□□□ -0.2
MCF2L2-204ENST00000459750 PEG3Q9GZU2 1588 aa13.81□□□□□ -0.2
MCF2L2-204ENST00000459750 RAPGEF2Q9Y4G8 1499 aa13.81□□□□□ -0.2
MCF2L2-204ENST00000459750 P3H3Q8IVL6 736 aa13.8□□□□□ -0.2
MCF2L2-204ENST00000459750 TNIKQ9UKE5 1360 aa13.8□□□□□ -0.2
MCF2L2-204ENST00000459750 ITGAEP38570 1179 aa13.77□□□□□ -0.2
MCF2L2-204ENST00000459750 GOLGA3Q08378 1498 aa13.77□□□□□ -0.2
MCF2L2-204ENST00000459750 CLIP1P30622 1438 aa13.75□□□□□ -0.21
MCF2L2-204ENST00000459750 NCAPD3P42695 1498 aa13.75□□□□□ -0.21
MCF2L2-204ENST00000459750 CEP164Q9UPV0 1460 aa13.69□□□□□ -0.22
MCF2L2-204ENST00000459750 EEA1Q15075 1411 aa13.69□□□□□ -0.22
MCF2L2-204ENST00000459750 NESP48681 1621 aa13.69□□□□□ -0.22
MCF2L2-204ENST00000459750 CUX1P39880 1505 aa13.68□□□□□ -0.22
MCF2L2-204ENST00000459750 ZEB1P37275 1124 aaPredicted RBP13.67□□□□□ -0.22
MCF2L2-204ENST00000459750 CC2D2AQ9P2K1 1620 aa13.67□□□□□ -0.22
MCF2L2-204ENST00000459750 KANK4Q5T7N3 995 aaPredicted RBP13.66□□□□□ -0.22
MCF2L2-204ENST00000459750 CADPSQ9ULU8 1353 aa13.63□□□□□ -0.23
MCF2L2-204ENST00000459750 CUX2O14529 1486 aa13.63□□□□□ -0.23
MCF2L2-204ENST00000459750 CFTRP13569 1480 aa13.62□□□□□ -0.23
MCF2L2-204ENST00000459750 TOP2BQ02880 1626 aa13.6□□□□□ -0.23
MCF2L2-204ENST00000459750 HMGXB3Q12766 1538 aa13.6□□□□□ -0.23
MCF2L2-204ENST00000459750 KIF27Q86VH2 1401 aa13.59□□□□□ -0.23
MCF2L2-204ENST00000459750 ARID3CA6NKF2 412 aa13.59□□□□□ -0.23
MCF2L2-204ENST00000459750 RAD54L2Q9Y4B4 1467 aa13.58□□□□□ -0.24
MCF2L2-204ENST00000459750 VPS8Q8N3P4 1428 aa13.54□□□□□ -0.24
MCF2L2-204ENST00000459750 FGD5Q6ZNL6 1462 aa13.53□□□□□ -0.24
MCF2L2-204ENST00000459750 TDRD9Q8NDG6 1382 aaKnown RBP13.53□□□□□ -0.24
MCF2L2-204ENST00000459750 FANCD2Q9BXW9 1451 aa13.53□□□□□ -0.24
MCF2L2-204ENST00000459750 IGF1RP08069 1367 aa13.52□□□□□ -0.24
MCF2L2-204ENST00000459750 KIF21BO75037 1637 aa13.52□□□□□ -0.25
MCF2L2-204ENST00000459750 PRKCSHP14314 528 aaPredicted RBP13.51□□□□□ -0.25
MCF2L2-204ENST00000459750 CARMIL1Q5VZK9 1371 aa13.5□□□□□ -0.25
MCF2L2-204ENST00000459750 ARAP1Q96P48 1450 aa13.5□□□□□ -0.25
MCF2L2-204ENST00000459750 PRXQ9BXM0 1461 aa13.49□□□□□ -0.25
MCF2L2-204ENST00000459750 FAM50AQ14320 339 aaKnown RBP13.48□□□□□ -0.25
MCF2L2-204ENST00000459750 BIVM-ERCC5R4GMW8 1640 aa13.46□□□□□ -0.26
MCF2L2-204ENST00000459750 YTHDC1Q96MU7 727 aaKnown RBP13.44□□□□□ -0.26
MCF2L2-204ENST00000459750 DIEXFQ68CQ4 756 aaKnown RBP13.43□□□□□ -0.26
MCF2L2-204ENST00000459750 ARHGAP35Q9NRY4 1499 aa13.4□□□□□ -0.26
MCF2L2-204ENST00000459750 FBLN2P98095 1184 aa13.38□□□□□ -0.27
MCF2L2-204ENST00000459750 FHOD3Q2V2M9 1422 aa13.38□□□□□ -0.27
MCF2L2-204ENST00000459750 POLA1P09884 1462 aaPredicted RBP13.38□□□□□ -0.27
MCF2L2-204ENST00000459750 TOPBP1Q92547 1522 aa13.35□□□□□ -0.27
MCF2L2-204ENST00000459750 NEUROD1Q13562 356 aa13.34□□□□□ -0.27
MCF2L2-204ENST00000459750 URB2Q14146 1524 aaKnown RBP13.32□□□□□ -0.28
MCF2L2-204ENST00000459750 ERICH3Q5RHP9 1530 aa13.32□□□□□ -0.28
MCF2L2-204ENST00000459750 AQRO60306 1485 aaKnown RBP eCLIP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms