RNA–Protein interactions for RNA: ENST00000456458.5

NT5C3A-208, Transcript of 5'-nucleotidase, cytosolic IIIA, humanhuman

TSL 1 (best)

Gene NT5C3A, Length 1,742 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NT5C3A-208ENST00000456458 NISCHQ9Y2I1 1504 aa30.71■■■□□ 2.51
NT5C3A-208ENST00000456458 CCDC180Q9P1Z9 1646 aa26.31■■□□□ 1.8
NT5C3A-208ENST00000456458 ZCCHC6Q5VYS8 1495 aaKnown RBP25.98■■□□□ 1.75
NT5C3A-208ENST00000456458 SHROOM4Q9ULL8 1493 aa25.77■■□□□ 1.72
NT5C3A-208ENST00000456458 DCAF1Q9Y4B6 1507 aa25.4■■□□□ 1.66
NT5C3A-208ENST00000456458 SUPT5HO00267 1087 aaKnown RBP25.3■■□□□ 1.64
NT5C3A-208ENST00000456458 DCAF8L2P0C7V8 631 aa25.15■■□□□ 1.62
NT5C3A-208ENST00000456458 MYO15BQ96JP2 1530 aa24.74■■□□□ 1.55
NT5C3A-208ENST00000456458 CHIC1Q5VXU3 224 aa24.7■■□□□ 1.54
NT5C3A-208ENST00000456458 ABCC9O60706 1549 aa24.5■■□□□ 1.51
NT5C3A-208ENST00000456458 SCRIBQ14160 1630 aa24.35■■□□□ 1.49
NT5C3A-208ENST00000456458 NACADO15069 1562 aa24.32■■□□□ 1.48
NT5C3A-208ENST00000456458 RSF1Q96T23 1441 aaPredicted RBP24.2■■□□□ 1.47
NT5C3A-208ENST00000456458 RB1CC1Q8TDY2 1594 aa24.04■■□□□ 1.44
NT5C3A-208ENST00000456458 HRCP23327 699 aa23.87■■□□□ 1.41
NT5C3A-208ENST00000456458 LOC105371045A0A1W2PR82 267 aa23.8■■□□□ 1.4
NT5C3A-208ENST00000456458 CECR2Q9BXF3 1484 aa23.78■■□□□ 1.4
NT5C3A-208ENST00000456458 PCGF6Q9BYE7 350 aa23.76■■□□□ 1.39
NT5C3A-208ENST00000456458 MROH2BQ7Z745 1585 aa23.75■■□□□ 1.39
NT5C3A-208ENST00000456458 TRIM41Q8WV44 630 aa23.74■■□□□ 1.39
NT5C3A-208ENST00000456458 BAZ1AQ9NRL2 1556 aaPredicted RBP23.65■■□□□ 1.38
NT5C3A-208ENST00000456458 WIZO95785 1651 aa23.61■■□□□ 1.37
NT5C3A-208ENST00000456458 TRIM26Q12899 539 aaPredicted RBP23.55■■□□□ 1.36
NT5C3A-208ENST00000456458 TOP2AP11388 1531 aaKnown RBP23.41■■□□□ 1.34
NT5C3A-208ENST00000456458 SMARCA4P51532 1647 aa23.4■■□□□ 1.34
NT5C3A-208ENST00000456458 UNC13AQ9UPW8 1703 aa23.37■■□□□ 1.33
NT5C3A-208ENST00000456458 EIF4G1Q04637 1599 aaKnown RBP23.37■■□□□ 1.33
NT5C3A-208ENST00000456458 FAM9AQ8IZU1 332 aaPredicted RBP23.3■■□□□ 1.32
NT5C3A-208ENST00000456458 CCDC88BA6NC98 1476 aa23.2■■□□□ 1.3
NT5C3A-208ENST00000456458 SMARCA2P51531 1590 aa23.2■■□□□ 1.3
NT5C3A-208ENST00000456458 ZEB1P37275 1124 aaPredicted RBP23.17■■□□□ 1.3
NT5C3A-208ENST00000456458 BICRAQ9NZM4 1560 aa23.1■■□□□ 1.29
NT5C3A-208ENST00000456458 PPARGC1BQ86YN6 1023 aaKnown RBP23.08■■□□□ 1.29
NT5C3A-208ENST00000456458 PEG3Q9GZU2 1588 aa23.07■■□□□ 1.28
NT5C3A-208ENST00000456458 EEA1Q15075 1411 aa22.99■■□□□ 1.27
NT5C3A-208ENST00000456458 ABCC8Q09428 1581 aa22.99■■□□□ 1.27
NT5C3A-208ENST00000456458 EHMT2Q96KQ7 1210 aa22.94■■□□□ 1.26
NT5C3A-208ENST00000456458 PABPN1Q86U42 306 aaKnown RBP eCLIP22.92■■□□□ 1.26
NT5C3A-208ENST00000456458 WRNQ14191 1432 aaPredicted RBP eCLIP22.84■■□□□ 1.25
NT5C3A-208ENST00000456458 TNIKQ9UKE5 1360 aa22.82■■□□□ 1.24
NT5C3A-208ENST00000456458 ATAD2BQ9ULI0 1458 aa22.8■■□□□ 1.24
NT5C3A-208ENST00000456458 SOGA1O94964 1423 aa22.78■■□□□ 1.24
NT5C3A-208ENST00000456458 CSRNP3Q8WYN3 585 aa22.77■■□□□ 1.24
NT5C3A-208ENST00000456458 CEP162Q5TB80 1403 aa22.74■■□□□ 1.23
NT5C3A-208ENST00000456458 BAZ1BQ9UIG0 1483 aaKnown RBP22.74■■□□□ 1.23
NT5C3A-208ENST00000456458 GOLGA3Q08378 1498 aa22.7■■□□□ 1.22
NT5C3A-208ENST00000456458 RUSC2Q8N2Y8 1516 aa22.62■■□□□ 1.21
NT5C3A-208ENST00000456458 UBTFP17480 764 aaKnown RBP22.6■■□□□ 1.21
NT5C3A-208ENST00000456458 SYNJ1O43426 1573 aa22.59■■□□□ 1.21
NT5C3A-208ENST00000456458 CEP164Q9UPV0 1460 aa22.59■■□□□ 1.21
NT5C3A-208ENST00000456458 KIF21BO75037 1637 aa22.59■■□□□ 1.21
NT5C3A-208ENST00000456458 HMGXB3Q12766 1538 aa22.48■■□□□ 1.19
NT5C3A-208ENST00000456458 CCER1Q8TC90 406 aaPredicted RBP22.46■■□□□ 1.19
NT5C3A-208ENST00000456458 TOP2BQ02880 1626 aa22.45■■□□□ 1.18
NT5C3A-208ENST00000456458 NCAPD3P42695 1498 aa22.44■■□□□ 1.18
NT5C3A-208ENST00000456458 BIVM-ERCC5R4GMW8 1640 aa22.4■■□□□ 1.18
NT5C3A-208ENST00000456458 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.39■■□□□ 1.17
NT5C3A-208ENST00000456458 CLIP1P30622 1438 aa22.37■■□□□ 1.17
NT5C3A-208ENST00000456458 VPS8Q8N3P4 1428 aa22.31■■□□□ 1.16
NT5C3A-208ENST00000456458 RAPGEF2Q9Y4G8 1499 aa22.28■■□□□ 1.16
NT5C3A-208ENST00000456458 ERICH3Q5RHP9 1530 aa22.27■■□□□ 1.16
NT5C3A-208ENST00000456458 TTBK1Q5TCY1 1321 aaPredicted RBP22.23■■□□□ 1.15
NT5C3A-208ENST00000456458 APLP2Q06481 763 aa22.21■■□□□ 1.15
NT5C3A-208ENST00000456458 CFTRP13569 1480 aa22.21■■□□□ 1.15
NT5C3A-208ENST00000456458 PRXQ9BXM0 1461 aa22.19■■□□□ 1.14
NT5C3A-208ENST00000456458 CUX1P39880 1505 aa22.15■■□□□ 1.14
NT5C3A-208ENST00000456458 KIF27Q86VH2 1401 aa22.14■■□□□ 1.13
NT5C3A-208ENST00000456458 PRDM2Q13029 1718 aa22.11■■□□□ 1.13
NT5C3A-208ENST00000456458 DIEXFQ68CQ4 756 aaKnown RBP22■■□□□ 1.11
NT5C3A-208ENST00000456458 ARAP1Q96P48 1450 aa21.98■■□□□ 1.11
NT5C3A-208ENST00000456458 CADPSQ9ULU8 1353 aa21.96■■□□□ 1.11
NT5C3A-208ENST00000456458 HNRNPUL2Q1KMD3 747 aaKnown RBP21.95■■□□□ 1.1
NT5C3A-208ENST00000456458 ZNF316A6NFI3 1004 aaPredicted RBP21.92■■□□□ 1.1
NT5C3A-208ENST00000456458 RANGAP1P46060 587 aaPredicted RBP21.91■■□□□ 1.1
NT5C3A-208ENST00000456458 CLSPNQ9HAW4 1339 aa21.87■■□□□ 1.09
NT5C3A-208ENST00000456458 CUX2O14529 1486 aa21.84■■□□□ 1.09
NT5C3A-208ENST00000456458 IGF1RP08069 1367 aa21.82■■□□□ 1.08
NT5C3A-208ENST00000456458 ARHGAP35Q9NRY4 1499 aa21.81■■□□□ 1.08
NT5C3A-208ENST00000456458 SCAF1Q9H7N4 1312 aaKnown RBP21.8■■□□□ 1.08
NT5C3A-208ENST00000456458 RRBP1Q9P2E9 1410 aaKnown RBP21.8■■□□□ 1.08
NT5C3A-208ENST00000456458 CENPBP07199 599 aaPredicted RBP21.8■■□□□ 1.08
NT5C3A-208ENST00000456458 CC2D2AQ9P2K1 1620 aa21.79■■□□□ 1.08
NT5C3A-208ENST00000456458 ACIN1Q9UKV3 1341 aaKnown RBP21.78■■□□□ 1.08
NT5C3A-208ENST00000456458 FGD5Q6ZNL6 1462 aa21.77■■□□□ 1.08
NT5C3A-208ENST00000456458 MAP3K1Q13233 1512 aa21.76■■□□□ 1.07
NT5C3A-208ENST00000456458 CARMIL1Q5VZK9 1371 aa21.75■■□□□ 1.07
NT5C3A-208ENST00000456458 KANK4Q5T7N3 995 aaPredicted RBP21.73■■□□□ 1.07
NT5C3A-208ENST00000456458 FANCD2Q9BXW9 1451 aa21.71■■□□□ 1.07
NT5C3A-208ENST00000456458 DNMBPQ6XZF7 1577 aa21.67■■□□□ 1.06
NT5C3A-208ENST00000456458 CCNB3Q8WWL7 1395 aa21.67■■□□□ 1.06
NT5C3A-208ENST00000456458 DHX57Q6P158 1386 aaKnown RBP21.66■■□□□ 1.06
NT5C3A-208ENST00000456458 PELP1Q8IZL8 1130 aaKnown RBP21.65■■□□□ 1.06
NT5C3A-208ENST00000456458 FHAD1B1AJZ9 1412 aa21.64■■□□□ 1.05
NT5C3A-208ENST00000456458 TIAM1Q13009 1591 aa21.62■■□□□ 1.05
NT5C3A-208ENST00000456458 NEUROD1Q13562 356 aa21.62■■□□□ 1.05
NT5C3A-208ENST00000456458 ABCA10Q8WWZ4 1543 aa21.62■■□□□ 1.05
NT5C3A-208ENST00000456458 TOPBP1Q92547 1522 aa21.57■■□□□ 1.04
NT5C3A-208ENST00000456458 CUL7Q14999 1698 aa21.55■■□□□ 1.04
NT5C3A-208ENST00000456458 EFCAB5A4FU69 1503 aa21.54■■□□□ 1.04
NT5C3A-208ENST00000456458 LRRC9Q6ZRR7 1453 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms