RNA–Protein interactions for RNA: ENST00000449211.1

LIPT1-206, Transcript of lipoyltransferase 1, humanhuman

TSL 2

Gene LIPT1, Length 482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPT1-206ENST00000449211 AEBP2Q6ZN18 517 aaPredicted RBP29.9■■■□□ 2.38
LIPT1-206ENST00000449211 CHIC1Q5VXU3 224 aa28.62■■■□□ 2.17
LIPT1-206ENST00000449211 NISCHQ9Y2I1 1504 aa25.75■■□□□ 1.71
LIPT1-206ENST00000449211 SENP3Q9H4L4 574 aaPredicted RBP25.52■■□□□ 1.68
LIPT1-206ENST00000449211 PHF23Q9BUL5 403 aaPredicted RBP25.23■■□□□ 1.63
LIPT1-206ENST00000449211 FOXD1Q16676 465 aa23.74■■□□□ 1.39
LIPT1-206ENST00000449211 ABCC9O60706 1549 aa23.29■■□□□ 1.32
LIPT1-206ENST00000449211 CCDC180Q9P1Z9 1646 aa23.11■■□□□ 1.29
LIPT1-206ENST00000449211 PLPPR3Q6T4P5 718 aa23.01■■□□□ 1.27
LIPT1-206ENST00000449211 PPP6R1Q9UPN7 881 aa22.36■■□□□ 1.17
LIPT1-206ENST00000449211 ADRA2BP18089 450 aa22.34■■□□□ 1.17
LIPT1-206ENST00000449211 PIAS4Q8N2W9 510 aaPredicted RBP22.3■■□□□ 1.16
LIPT1-206ENST00000449211 MSH5O43196 834 aa22.16■■□□□ 1.14
LIPT1-206ENST00000449211 DNAJC5BQ9UF47 199 aa22.04■■□□□ 1.12
LIPT1-206ENST00000449211 RB1CC1Q8TDY2 1594 aa22.03■■□□□ 1.12
LIPT1-206ENST00000449211 NACADO15069 1562 aa21.85■■□□□ 1.09
LIPT1-206ENST00000449211 DCAF8L2P0C7V8 631 aa21.76■■□□□ 1.07
LIPT1-206ENST00000449211 UNC13AQ9UPW8 1703 aa21.71■■□□□ 1.07
LIPT1-206ENST00000449211 PABPN1Q86U42 306 aaKnown RBP eCLIP21.69■■□□□ 1.06
LIPT1-206ENST00000449211 BICRAQ9NZM4 1560 aa21.53■■□□□ 1.04
LIPT1-206ENST00000449211 MYO15BQ96JP2 1530 aa21.49■■□□□ 1.03
LIPT1-206ENST00000449211 ZCCHC6Q5VYS8 1495 aaKnown RBP21.32■■□□□ 1
LIPT1-206ENST00000449211 POTEDQ86YR6 584 aa21.25■□□□□ 0.99
LIPT1-206ENST00000449211 DCAF1Q9Y4B6 1507 aa21.2■□□□□ 0.98
LIPT1-206ENST00000449211 SCRIBQ14160 1630 aa21.14■□□□□ 0.97
LIPT1-206ENST00000449211 CC2D2AQ9P2K1 1620 aa21.03■□□□□ 0.96
LIPT1-206ENST00000449211 SHROOM4Q9ULL8 1493 aa21.01■□□□□ 0.95
LIPT1-206ENST00000449211 CECR2Q9BXF3 1484 aa20.94■□□□□ 0.94
LIPT1-206ENST00000449211 EIF4G1Q04637 1599 aaKnown RBP20.94■□□□□ 0.94
LIPT1-206ENST00000449211 SCAF1Q9H7N4 1312 aaKnown RBP20.48■□□□□ 0.87
LIPT1-206ENST00000449211 MAPK8IP2Q13387 824 aaPredicted RBP20.46■□□□□ 0.87
LIPT1-206ENST00000449211 DMRT2Q9Y5R5 561 aa20.24■□□□□ 0.83
LIPT1-206ENST00000449211 NCAPD3P42695 1498 aa20.2■□□□□ 0.82
LIPT1-206ENST00000449211 PPP4R3CPQ6ZMV5 832 aa20.2■□□□□ 0.82
LIPT1-206ENST00000449211 DNAJC5Q9H3Z4 198 aa20.17■□□□□ 0.82
LIPT1-206ENST00000449211 ATAD2BQ9ULI0 1458 aa20.16■□□□□ 0.82
LIPT1-206ENST00000449211 SMARCA4P51532 1647 aa20.13■□□□□ 0.81
LIPT1-206ENST00000449211 HMGXB3Q12766 1538 aa20.03■□□□□ 0.8
LIPT1-206ENST00000449211 NESP48681 1621 aa20.03■□□□□ 0.8
LIPT1-206ENST00000449211 SMARCA2P51531 1590 aa20.03■□□□□ 0.8
LIPT1-206ENST00000449211 ERCC6Q03468 1493 aa20.02■□□□□ 0.8
LIPT1-206ENST00000449211 CUX2O14529 1486 aa20.01■□□□□ 0.79
LIPT1-206ENST00000449211 BAZ1AQ9NRL2 1556 aaPredicted RBP19.95■□□□□ 0.78
LIPT1-206ENST00000449211 BAZ1BQ9UIG0 1483 aaKnown RBP19.92■□□□□ 0.78
LIPT1-206ENST00000449211 MROH2BQ7Z745 1585 aa19.9■□□□□ 0.78
LIPT1-206ENST00000449211 PEG3Q9GZU2 1588 aa19.9■□□□□ 0.78
LIPT1-206ENST00000449211 THOC2Q8NI27 1593 aaKnown RBP19.81■□□□□ 0.76
LIPT1-206ENST00000449211 KIF21AQ7Z4S6 1674 aa19.76■□□□□ 0.75
LIPT1-206ENST00000449211 CNKSR2Q8WXI2 1034 aa19.76■□□□□ 0.75
LIPT1-206ENST00000449211 LAMC3Q9Y6N6 1575 aa19.74■□□□□ 0.75
LIPT1-206ENST00000449211 WIZO95785 1651 aa19.68■□□□□ 0.74
LIPT1-206ENST00000449211 PDS5BQ9NTI5 1447 aa19.59■□□□□ 0.73
LIPT1-206ENST00000449211 CADPSQ9ULU8 1353 aa19.57■□□□□ 0.72
LIPT1-206ENST00000449211 DCAF8L1A6NGE4 600 aa19.57■□□□□ 0.72
LIPT1-206ENST00000449211 HOXD11P31277 338 aaPredicted RBP19.55■□□□□ 0.72
LIPT1-206ENST00000449211 NCBP3Q53F19 620 aaKnown RBP19.52■□□□□ 0.72
LIPT1-206ENST00000449211 RNF216Q9NWF9 866 aaPredicted RBP19.5■□□□□ 0.71
LIPT1-206ENST00000449211 MRC2Q9UBG0 1479 aa19.48■□□□□ 0.71
LIPT1-206ENST00000449211 WDR62O43379 1518 aa19.46■□□□□ 0.71
LIPT1-206ENST00000449211 RSF1Q96T23 1441 aaPredicted RBP19.42■□□□□ 0.7
LIPT1-206ENST00000449211 FANCD2Q9BXW9 1451 aa19.38■□□□□ 0.69
LIPT1-206ENST00000449211 CEP164Q9UPV0 1460 aa19.38■□□□□ 0.69
LIPT1-206ENST00000449211 CFTRP13569 1480 aa19.35■□□□□ 0.69
LIPT1-206ENST00000449211 TOP2AP11388 1531 aaKnown RBP19.34■□□□□ 0.69
LIPT1-206ENST00000449211 URB2Q14146 1524 aaKnown RBP19.28■□□□□ 0.68
LIPT1-206ENST00000449211 TRIM41Q8WV44 630 aa19.26■□□□□ 0.67
LIPT1-206ENST00000449211 NPM3O75607 178 aaKnown RBP19.19■□□□□ 0.66
LIPT1-206ENST00000449211 PRDM2Q13029 1718 aa19.19■□□□□ 0.66
LIPT1-206ENST00000449211 CCDC88BA6NC98 1476 aa19.16■□□□□ 0.66
LIPT1-206ENST00000449211 ZNF608Q9ULD9 1512 aaPredicted RBP19.08■□□□□ 0.64
LIPT1-206ENST00000449211 OSCARQ8IYS5 282 aa19.07■□□□□ 0.64
LIPT1-206ENST00000449211 KCNA4P22459 653 aa19.03■□□□□ 0.64
LIPT1-206ENST00000449211 TOPBP1Q92547 1522 aa19.02■□□□□ 0.64
LIPT1-206ENST00000449211 IFT140Q96RY7 1462 aa18.97■□□□□ 0.63
LIPT1-206ENST00000449211 CACNB1Q02641 598 aaPredicted RBP18.95■□□□□ 0.62
LIPT1-206ENST00000449211 RIMBP3CA6NJZ7 1639 aa18.95■□□□□ 0.62
LIPT1-206ENST00000449211 RIMBP3BA6NNM3 1639 aa18.95■□□□□ 0.62
LIPT1-206ENST00000449211 RIMBP3Q9UFD9 1639 aa18.95■□□□□ 0.62
LIPT1-206ENST00000449211 EIF4G3O43432 1585 aaKnown RBP18.93■□□□□ 0.62
LIPT1-206ENST00000449211 DNMBPQ6XZF7 1577 aa18.91■□□□□ 0.62
LIPT1-206ENST00000449211 RNF39Q9H2S5 420 aa18.89■□□□□ 0.61
LIPT1-206ENST00000449211 TARBP1Q13395 1621 aaKnown RBP18.89■□□□□ 0.61
LIPT1-206ENST00000449211 AQRO60306 1485 aaKnown RBP eCLIP18.87■□□□□ 0.61
LIPT1-206ENST00000449211 CHD1O14646 1710 aa18.85■□□□□ 0.61
LIPT1-206ENST00000449211 ABCC8Q09428 1581 aa18.85■□□□□ 0.61
LIPT1-206ENST00000449211 ARHGEF11O15085 1522 aa18.84■□□□□ 0.61
LIPT1-206ENST00000449211 POLA1P09884 1462 aaPredicted RBP18.83■□□□□ 0.6
LIPT1-206ENST00000449211 RAD54L2Q9Y4B4 1467 aa18.8■□□□□ 0.6
LIPT1-206ENST00000449211 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.77■□□□□ 0.6
LIPT1-206ENST00000449211 TDRD9Q8NDG6 1382 aaKnown RBP18.72■□□□□ 0.59
LIPT1-206ENST00000449211 SOGA1O94964 1423 aa18.7■□□□□ 0.58
LIPT1-206ENST00000449211 CYB5RLQ6IPT4 315 aa18.7■□□□□ 0.58
LIPT1-206ENST00000449211 CUX1P39880 1505 aa18.69■□□□□ 0.58
LIPT1-206ENST00000449211 FBLN2P98095 1184 aa18.69■□□□□ 0.58
LIPT1-206ENST00000449211 FGD5Q6ZNL6 1462 aa18.69■□□□□ 0.58
LIPT1-206ENST00000449211 ARAP1Q96P48 1450 aa18.69■□□□□ 0.58
LIPT1-206ENST00000449211 C1QBPQ07021 282 aaKnown RBP18.66■□□□□ 0.58
LIPT1-206ENST00000449211 SNAPC4Q5SXM2 1469 aa18.65■□□□□ 0.58
LIPT1-206ENST00000449211 WDR97A6NE52 1622 aa18.6■□□□□ 0.57
LIPT1-206ENST00000449211 CLASP1Q7Z460 1538 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms