RNA–Protein interactions for RNA: ENST00000448638.5

VWA3B-207, Transcript of von Willebrand factor A domain containing 3B, humanhuman

TSL 2

Gene VWA3B, Length 2,516 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3B-207ENST00000448638 NISCHQ9Y2I1 1504 aa36.36■■■■□ 3.41
VWA3B-207ENST00000448638 CCDC180Q9P1Z9 1646 aa31.18■■■□□ 2.58
VWA3B-207ENST00000448638 ZCCHC6Q5VYS8 1495 aaKnown RBP30.77■■■□□ 2.52
VWA3B-207ENST00000448638 SHROOM4Q9ULL8 1493 aa30.48■■■□□ 2.47
VWA3B-207ENST00000448638 DCAF1Q9Y4B6 1507 aa30.05■■■□□ 2.4
VWA3B-207ENST00000448638 SUPT5HO00267 1087 aaKnown RBP29.88■■■□□ 2.37
VWA3B-207ENST00000448638 DCAF8L2P0C7V8 631 aa29.69■■■□□ 2.34
VWA3B-207ENST00000448638 MYO15BQ96JP2 1530 aa29.26■■■□□ 2.27
VWA3B-207ENST00000448638 CHIC1Q5VXU3 224 aa29.2■■■□□ 2.27
VWA3B-207ENST00000448638 ABCC9O60706 1549 aa29.03■■■□□ 2.24
VWA3B-207ENST00000448638 SCRIBQ14160 1630 aa28.86■■■□□ 2.21
VWA3B-207ENST00000448638 NACADO15069 1562 aa28.77■■■□□ 2.2
VWA3B-207ENST00000448638 RSF1Q96T23 1441 aaPredicted RBP28.64■■■□□ 2.18
VWA3B-207ENST00000448638 RB1CC1Q8TDY2 1594 aa28.45■■■□□ 2.14
VWA3B-207ENST00000448638 CECR2Q9BXF3 1484 aa28.18■■■□□ 2.1
VWA3B-207ENST00000448638 HRCP23327 699 aa28.17■■■□□ 2.1
VWA3B-207ENST00000448638 MROH2BQ7Z745 1585 aa28.15■■■□□ 2.1
VWA3B-207ENST00000448638 LOC105371045A0A1W2PR82 267 aa28.14■■■□□ 2.09
VWA3B-207ENST00000448638 PCGF6Q9BYE7 350 aa28.05■■■□□ 2.08
VWA3B-207ENST00000448638 WIZO95785 1651 aa28.01■■■□□ 2.07
VWA3B-207ENST00000448638 TRIM41Q8WV44 630 aa28■■■□□ 2.07
VWA3B-207ENST00000448638 BAZ1AQ9NRL2 1556 aaPredicted RBP27.98■■■□□ 2.07
VWA3B-207ENST00000448638 UNC13AQ9UPW8 1703 aa27.82■■■□□ 2.04
VWA3B-207ENST00000448638 TRIM26Q12899 539 aaPredicted RBP27.76■■■□□ 2.03
VWA3B-207ENST00000448638 EIF4G1Q04637 1599 aaKnown RBP27.75■■■□□ 2.03
VWA3B-207ENST00000448638 SMARCA4P51532 1647 aa27.73■■■□□ 2.03
VWA3B-207ENST00000448638 PELP1Q8IZL8 1130 aaKnown RBP27.72■■■□□ 2.03
VWA3B-207ENST00000448638 TOP2AP11388 1531 aaKnown RBP27.71■■■□□ 2.03
VWA3B-207ENST00000448638 FAM9AQ8IZU1 332 aaPredicted RBP27.54■■■□□ 2
VWA3B-207ENST00000448638 SMARCA2P51531 1590 aa27.5■■□□□ 1.99
VWA3B-207ENST00000448638 CCDC88BA6NC98 1476 aa27.45■■□□□ 1.99
VWA3B-207ENST00000448638 BICRAQ9NZM4 1560 aa27.42■■□□□ 1.98
VWA3B-207ENST00000448638 PEG3Q9GZU2 1588 aa27.33■■□□□ 1.97
VWA3B-207ENST00000448638 PPARGC1BQ86YN6 1023 aaKnown RBP27.32■■□□□ 1.96
VWA3B-207ENST00000448638 ABCC8Q09428 1581 aa27.26■■□□□ 1.96
VWA3B-207ENST00000448638 ZEB1P37275 1124 aaPredicted RBP27.25■■□□□ 1.95
VWA3B-207ENST00000448638 EEA1Q15075 1411 aa27.14■■□□□ 1.93
VWA3B-207ENST00000448638 EHMT2Q96KQ7 1210 aa27.12■■□□□ 1.93
VWA3B-207ENST00000448638 PABPN1Q86U42 306 aaKnown RBP eCLIP27.1■■□□□ 1.93
VWA3B-207ENST00000448638 MYT1Q01538 1121 aa27.09■■□□□ 1.93
VWA3B-207ENST00000448638 WRNQ14191 1432 aaPredicted RBP eCLIP27■■□□□ 1.91
VWA3B-207ENST00000448638 ATAD2BQ9ULI0 1458 aa26.97■■□□□ 1.91
VWA3B-207ENST00000448638 SOGA1O94964 1423 aa26.97■■□□□ 1.91
VWA3B-207ENST00000448638 TNIKQ9UKE5 1360 aa26.96■■□□□ 1.91
VWA3B-207ENST00000448638 BAZ1BQ9UIG0 1483 aaKnown RBP26.89■■□□□ 1.9
VWA3B-207ENST00000448638 CEP162Q5TB80 1403 aa26.89■■□□□ 1.9
VWA3B-207ENST00000448638 CSRNP3Q8WYN3 585 aa26.88■■□□□ 1.89
VWA3B-207ENST00000448638 GOLGA3Q08378 1498 aa26.82■■□□□ 1.88
VWA3B-207ENST00000448638 RUSC2Q8N2Y8 1516 aa26.81■■□□□ 1.88
VWA3B-207ENST00000448638 SYNJ1O43426 1573 aa26.79■■□□□ 1.88
VWA3B-207ENST00000448638 KIF21BO75037 1637 aa26.74■■□□□ 1.87
VWA3B-207ENST00000448638 CEP164Q9UPV0 1460 aa26.7■■□□□ 1.86
VWA3B-207ENST00000448638 UBTFP17480 764 aaKnown RBP26.64■■□□□ 1.85
VWA3B-207ENST00000448638 HMGXB3Q12766 1538 aa26.61■■□□□ 1.85
VWA3B-207ENST00000448638 TOP2BQ02880 1626 aa26.59■■□□□ 1.85
VWA3B-207ENST00000448638 BIVM-ERCC5R4GMW8 1640 aa26.56■■□□□ 1.84
VWA3B-207ENST00000448638 NCAPD3P42695 1498 aa26.54■■□□□ 1.84
VWA3B-207ENST00000448638 CCER1Q8TC90 406 aaPredicted RBP26.47■■□□□ 1.83
VWA3B-207ENST00000448638 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.45■■□□□ 1.82
VWA3B-207ENST00000448638 CLIP1P30622 1438 aa26.42■■□□□ 1.82
VWA3B-207ENST00000448638 RAPGEF2Q9Y4G8 1499 aa26.37■■□□□ 1.81
VWA3B-207ENST00000448638 VPS8Q8N3P4 1428 aa26.36■■□□□ 1.81
VWA3B-207ENST00000448638 ERICH3Q5RHP9 1530 aa26.35■■□□□ 1.81
VWA3B-207ENST00000448638 TTBK1Q5TCY1 1321 aaPredicted RBP26.27■■□□□ 1.8
VWA3B-207ENST00000448638 CFTRP13569 1480 aa26.27■■□□□ 1.8
VWA3B-207ENST00000448638 PRDM2Q13029 1718 aa26.27■■□□□ 1.8
VWA3B-207ENST00000448638 PRXQ9BXM0 1461 aa26.25■■□□□ 1.79
VWA3B-207ENST00000448638 CUX1P39880 1505 aa26.25■■□□□ 1.79
VWA3B-207ENST00000448638 KIF27Q86VH2 1401 aa26.14■■□□□ 1.78
VWA3B-207ENST00000448638 APLP2Q06481 763 aa26.13■■□□□ 1.77
VWA3B-207ENST00000448638 ARAP1Q96P48 1450 aa26.03■■□□□ 1.76
VWA3B-207ENST00000448638 CADPSQ9ULU8 1353 aa25.94■■□□□ 1.74
VWA3B-207ENST00000448638 DIEXFQ68CQ4 756 aaKnown RBP25.93■■□□□ 1.74
VWA3B-207ENST00000448638 HNRNPUL2Q1KMD3 747 aaKnown RBP25.91■■□□□ 1.74
VWA3B-207ENST00000448638 RANGAP1P46060 587 aaPredicted RBP25.87■■□□□ 1.73
VWA3B-207ENST00000448638 ZNF316A6NFI3 1004 aaPredicted RBP25.84■■□□□ 1.73
VWA3B-207ENST00000448638 SCAF1Q9H7N4 1312 aaKnown RBP25.84■■□□□ 1.73
VWA3B-207ENST00000448638 CC2D2AQ9P2K1 1620 aa25.83■■□□□ 1.73
VWA3B-207ENST00000448638 CUX2O14529 1486 aa25.82■■□□□ 1.72
VWA3B-207ENST00000448638 ARHGAP35Q9NRY4 1499 aa25.82■■□□□ 1.72
VWA3B-207ENST00000448638 IGF1RP08069 1367 aa25.79■■□□□ 1.72
VWA3B-207ENST00000448638 FGD5Q6ZNL6 1462 aa25.78■■□□□ 1.72
VWA3B-207ENST00000448638 CLSPNQ9HAW4 1339 aa25.77■■□□□ 1.72
VWA3B-207ENST00000448638 RRBP1Q9P2E9 1410 aaKnown RBP25.77■■□□□ 1.72
VWA3B-207ENST00000448638 MAP3K1Q13233 1512 aa25.71■■□□□ 1.71
VWA3B-207ENST00000448638 KANK4Q5T7N3 995 aaPredicted RBP25.7■■□□□ 1.71
VWA3B-207ENST00000448638 CARMIL1Q5VZK9 1371 aa25.69■■□□□ 1.7
VWA3B-207ENST00000448638 ACIN1Q9UKV3 1341 aaKnown RBP25.68■■□□□ 1.7
VWA3B-207ENST00000448638 FANCD2Q9BXW9 1451 aa25.67■■□□□ 1.7
VWA3B-207ENST00000448638 DNMBPQ6XZF7 1577 aa25.66■■□□□ 1.7
VWA3B-207ENST00000448638 CENPBP07199 599 aaPredicted RBP25.63■■□□□ 1.69
VWA3B-207ENST00000448638 DHX57Q6P158 1386 aaKnown RBP25.61■■□□□ 1.69
VWA3B-207ENST00000448638 TIAM1Q13009 1591 aa25.61■■□□□ 1.69
VWA3B-207ENST00000448638 CCNB3Q8WWL7 1395 aa25.58■■□□□ 1.69
VWA3B-207ENST00000448638 ABCA10Q8WWZ4 1543 aa25.58■■□□□ 1.68
VWA3B-207ENST00000448638 NEUROD1Q13562 356 aa25.54■■□□□ 1.68
VWA3B-207ENST00000448638 TOPBP1Q92547 1522 aa25.53■■□□□ 1.68
VWA3B-207ENST00000448638 FHAD1B1AJZ9 1412 aa25.53■■□□□ 1.68
VWA3B-207ENST00000448638 CUL7Q14999 1698 aa25.52■■□□□ 1.68
VWA3B-207ENST00000448638 CFAP43Q8NDM7 1665 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms