RNA–Protein interactions for RNA: ENST00000446927.5

SEMA4F-206, Transcript of ssemaphorin 4F, humanhuman

TSL 1 (best)

Gene SEMA4F, Length 2,672 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4F-206ENST00000446927 NISCHQ9Y2I1 1504 aa29.52■■■□□ 2.32
SEMA4F-206ENST00000446927 CCDC180Q9P1Z9 1646 aa25.44■■□□□ 1.66
SEMA4F-206ENST00000446927 ZCCHC6Q5VYS8 1495 aaKnown RBP24.83■■□□□ 1.57
SEMA4F-206ENST00000446927 DCAF8L2P0C7V8 631 aa24.61■■□□□ 1.53
SEMA4F-206ENST00000446927 SHROOM4Q9ULL8 1493 aa24.58■■□□□ 1.53
SEMA4F-206ENST00000446927 DCAF1Q9Y4B6 1507 aa24.23■■□□□ 1.47
SEMA4F-206ENST00000446927 ABCC9O60706 1549 aa24.21■■□□□ 1.47
SEMA4F-206ENST00000446927 SUPT5HO00267 1087 aaKnown RBP23.98■■□□□ 1.43
SEMA4F-206ENST00000446927 MYO15BQ96JP2 1530 aa23.81■■□□□ 1.4
SEMA4F-206ENST00000446927 SCRIBQ14160 1630 aa23.71■■□□□ 1.39
SEMA4F-206ENST00000446927 NACADO15069 1562 aa23.69■■□□□ 1.38
SEMA4F-206ENST00000446927 CHIC1Q5VXU3 224 aa23.48■■□□□ 1.35
SEMA4F-206ENST00000446927 HRCP23327 699 aa23.47■■□□□ 1.35
SEMA4F-206ENST00000446927 RB1CC1Q8TDY2 1594 aa23.46■■□□□ 1.35
SEMA4F-206ENST00000446927 PCGF6Q9BYE7 350 aa23.22■■□□□ 1.31
SEMA4F-206ENST00000446927 UNC13AQ9UPW8 1703 aa23.15■■□□□ 1.3
SEMA4F-206ENST00000446927 CECR2Q9BXF3 1484 aa23.11■■□□□ 1.29
SEMA4F-206ENST00000446927 RSF1Q96T23 1441 aaPredicted RBP23.08■■□□□ 1.29
SEMA4F-206ENST00000446927 PPARGC1BQ86YN6 1023 aaKnown RBP23.01■■□□□ 1.27
SEMA4F-206ENST00000446927 PABPN1Q86U42 306 aaKnown RBP eCLIP23■■□□□ 1.27
SEMA4F-206ENST00000446927 MROH2BQ7Z745 1585 aa22.93■■□□□ 1.26
SEMA4F-206ENST00000446927 BICRAQ9NZM4 1560 aa22.92■■□□□ 1.26
SEMA4F-206ENST00000446927 LOC105371045A0A1W2PR82 267 aa22.85■■□□□ 1.25
SEMA4F-206ENST00000446927 WIZO95785 1651 aa22.76■■□□□ 1.23
SEMA4F-206ENST00000446927 BAZ1AQ9NRL2 1556 aaPredicted RBP22.7■■□□□ 1.22
SEMA4F-206ENST00000446927 TRIM26Q12899 539 aaPredicted RBP22.66■■□□□ 1.22
SEMA4F-206ENST00000446927 SMARCA4P51532 1647 aa22.64■■□□□ 1.21
SEMA4F-206ENST00000446927 TOP2AP11388 1531 aaKnown RBP22.37■■□□□ 1.17
SEMA4F-206ENST00000446927 ZEB1P37275 1124 aaPredicted RBP22.35■■□□□ 1.17
SEMA4F-206ENST00000446927 TRIM41Q8WV44 630 aa22.3■■□□□ 1.16
SEMA4F-206ENST00000446927 CCDC88BA6NC98 1476 aa22.28■■□□□ 1.16
SEMA4F-206ENST00000446927 PEG3Q9GZU2 1588 aa22.26■■□□□ 1.15
SEMA4F-206ENST00000446927 SMARCA2P51531 1590 aa22.25■■□□□ 1.15
SEMA4F-206ENST00000446927 ATAD2BQ9ULI0 1458 aa22.25■■□□□ 1.15
SEMA4F-206ENST00000446927 PELP1Q8IZL8 1130 aaKnown RBP22.19■■□□□ 1.14
SEMA4F-206ENST00000446927 EIF4G1Q04637 1599 aaKnown RBP22.16■■□□□ 1.14
SEMA4F-206ENST00000446927 FAM9AQ8IZU1 332 aaPredicted RBP22.16■■□□□ 1.14
SEMA4F-206ENST00000446927 BAZ1BQ9UIG0 1483 aaKnown RBP22.1■■□□□ 1.13
SEMA4F-206ENST00000446927 SCAF1Q9H7N4 1312 aaKnown RBP22.01■■□□□ 1.11
SEMA4F-206ENST00000446927 EHMT2Q96KQ7 1210 aa21.98■■□□□ 1.11
SEMA4F-206ENST00000446927 ABCC8Q09428 1581 aa21.98■■□□□ 1.11
SEMA4F-206ENST00000446927 NCAPD3P42695 1498 aa21.95■■□□□ 1.1
SEMA4F-206ENST00000446927 HMGXB3Q12766 1538 aa21.87■■□□□ 1.09
SEMA4F-206ENST00000446927 CC2D2AQ9P2K1 1620 aa21.81■■□□□ 1.08
SEMA4F-206ENST00000446927 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.68■■□□□ 1.06
SEMA4F-206ENST00000446927 CCER1Q8TC90 406 aaPredicted RBP21.67■■□□□ 1.06
SEMA4F-206ENST00000446927 WRNQ14191 1432 aaPredicted RBP eCLIP21.66■■□□□ 1.06
SEMA4F-206ENST00000446927 SYNJ1O43426 1573 aa21.63■■□□□ 1.05
SEMA4F-206ENST00000446927 SOGA1O94964 1423 aa21.62■■□□□ 1.05
SEMA4F-206ENST00000446927 RUSC2Q8N2Y8 1516 aa21.59■■□□□ 1.05
SEMA4F-206ENST00000446927 DNAJC5BQ9UF47 199 aa21.58■■□□□ 1.04
SEMA4F-206ENST00000446927 CFTRP13569 1480 aa21.56■■□□□ 1.04
SEMA4F-206ENST00000446927 ACIN1Q9UKV3 1341 aaKnown RBP21.55■■□□□ 1.04
SEMA4F-206ENST00000446927 NEUROD1Q13562 356 aa21.5■■□□□ 1.03
SEMA4F-206ENST00000446927 DIEXFQ68CQ4 756 aaKnown RBP21.46■■□□□ 1.03
SEMA4F-206ENST00000446927 CADPSQ9ULU8 1353 aa21.45■■□□□ 1.02
SEMA4F-206ENST00000446927 TOP2BQ02880 1626 aa21.4■■□□□ 1.02
SEMA4F-206ENST00000446927 CUX1P39880 1505 aa21.4■■□□□ 1.02
SEMA4F-206ENST00000446927 CENPBP07199 599 aaPredicted RBP21.38■■□□□ 1.01
SEMA4F-206ENST00000446927 TTBK1Q5TCY1 1321 aaPredicted RBP21.38■■□□□ 1.01
SEMA4F-206ENST00000446927 CSRNP3Q8WYN3 585 aa21.38■■□□□ 1.01
SEMA4F-206ENST00000446927 NESP48681 1621 aa21.38■■□□□ 1.01
SEMA4F-206ENST00000446927 BIVM-ERCC5R4GMW8 1640 aa21.34■■□□□ 1.01
SEMA4F-206ENST00000446927 GTF3C3Q9Y5Q9 886 aa21.33■■□□□ 1.01
SEMA4F-206ENST00000446927 CEP162Q5TB80 1403 aa21.33■■□□□ 1
SEMA4F-206ENST00000446927 PRDM2Q13029 1718 aa21.31■■□□□ 1
SEMA4F-206ENST00000446927 MYT1Q01538 1121 aa21.3■■□□□ 1
SEMA4F-206ENST00000446927 EEA1Q15075 1411 aa21.29■■□□□ 1
SEMA4F-206ENST00000446927 TNIKQ9UKE5 1360 aa21.27■■□□□ 1
SEMA4F-206ENST00000446927 FANCD2Q9BXW9 1451 aa21.23■□□□□ 0.99
SEMA4F-206ENST00000446927 UBTFP17480 764 aaKnown RBP21.2■□□□□ 0.98
SEMA4F-206ENST00000446927 ZNF316A6NFI3 1004 aaPredicted RBP21.19■□□□□ 0.98
SEMA4F-206ENST00000446927 GOLGA3Q08378 1498 aa21.13■□□□□ 0.97
SEMA4F-206ENST00000446927 RAPGEF2Q9Y4G8 1499 aa21.12■□□□□ 0.97
SEMA4F-206ENST00000446927 FGD5Q6ZNL6 1462 aa21.11■□□□□ 0.97
SEMA4F-206ENST00000446927 LAMC3Q9Y6N6 1575 aa21.1■□□□□ 0.97
SEMA4F-206ENST00000446927 CEP164Q9UPV0 1460 aa21.09■□□□□ 0.97
SEMA4F-206ENST00000446927 KIF21BO75037 1637 aa21.08■□□□□ 0.97
SEMA4F-206ENST00000446927 KIF27Q86VH2 1401 aa21.04■□□□□ 0.96
SEMA4F-206ENST00000446927 TOPBP1Q92547 1522 aa21.03■□□□□ 0.96
SEMA4F-206ENST00000446927 CUX2O14529 1486 aa21.02■□□□□ 0.96
SEMA4F-206ENST00000446927 RAD54L2Q9Y4B4 1467 aa21.01■□□□□ 0.95
SEMA4F-206ENST00000446927 URB2Q14146 1524 aaKnown RBP21.01■□□□□ 0.95
SEMA4F-206ENST00000446927 DNMBPQ6XZF7 1577 aa21.01■□□□□ 0.95
SEMA4F-206ENST00000446927 PRXQ9BXM0 1461 aa21■□□□□ 0.95
SEMA4F-206ENST00000446927 YTHDC1Q96MU7 727 aaKnown RBP21■□□□□ 0.95
SEMA4F-206ENST00000446927 RANGAP1P46060 587 aaPredicted RBP20.99■□□□□ 0.95
SEMA4F-206ENST00000446927 KIF21AQ7Z4S6 1674 aa20.99■□□□□ 0.95
SEMA4F-206ENST00000446927 HNRNPUL2Q1KMD3 747 aaKnown RBP20.98■□□□□ 0.95
SEMA4F-206ENST00000446927 POLA1P09884 1462 aaPredicted RBP20.98■□□□□ 0.95
SEMA4F-206ENST00000446927 PDS5BQ9NTI5 1447 aa20.97■□□□□ 0.95
SEMA4F-206ENST00000446927 MIER1Q8N108 512 aa20.94■□□□□ 0.94
SEMA4F-206ENST00000446927 IGF1RP08069 1367 aa20.94■□□□□ 0.94
SEMA4F-206ENST00000446927 CLIP1P30622 1438 aa20.88■□□□□ 0.93
SEMA4F-206ENST00000446927 ERICH3Q5RHP9 1530 aa20.87■□□□□ 0.93
SEMA4F-206ENST00000446927 ABCA10Q8WWZ4 1543 aa20.84■□□□□ 0.93
SEMA4F-206ENST00000446927 APLP2Q06481 763 aa20.83■□□□□ 0.92
SEMA4F-206ENST00000446927 CARMIL1Q5VZK9 1371 aa20.8■□□□□ 0.92
SEMA4F-206ENST00000446927 VPS8Q8N3P4 1428 aa20.8■□□□□ 0.92
SEMA4F-206ENST00000446927 TDRD9Q8NDG6 1382 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms