RNA–Protein interactions for RNA: ENST00000446227.2

LINC01712-201, Transcript of long intergenic non-protein coding RNA 1712, humanhuman

TSL 5 BASIC

Gene LINC01712, Length 1,044 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01712-201ENST00000446227 AEBP2Q6ZN18 517 aaPredicted RBP26.87■■□□□ 1.89
LINC01712-201ENST00000446227 CHIC1Q5VXU3 224 aa26.16■■□□□ 1.78
LINC01712-201ENST00000446227 NISCHQ9Y2I1 1504 aa24.25■■□□□ 1.47
LINC01712-201ENST00000446227 PHF23Q9BUL5 403 aaPredicted RBP23.12■■□□□ 1.29
LINC01712-201ENST00000446227 SENP3Q9H4L4 574 aaPredicted RBP22.6■■□□□ 1.21
LINC01712-201ENST00000446227 PLPPR3Q6T4P5 718 aa21.2■□□□□ 0.98
LINC01712-201ENST00000446227 FOXD1Q16676 465 aa21.1■□□□□ 0.97
LINC01712-201ENST00000446227 CCDC180Q9P1Z9 1646 aa21.1■□□□□ 0.97
LINC01712-201ENST00000446227 PPP6R1Q9UPN7 881 aa20.41■□□□□ 0.86
LINC01712-201ENST00000446227 ADRA2BP18089 450 aa20.39■□□□□ 0.85
LINC01712-201ENST00000446227 ZCCHC6Q5VYS8 1495 aaKnown RBP20.37■□□□□ 0.85
LINC01712-201ENST00000446227 DCAF1Q9Y4B6 1507 aa20.08■□□□□ 0.81
LINC01712-201ENST00000446227 DCAF8L2P0C7V8 631 aa20.05■□□□□ 0.8
LINC01712-201ENST00000446227 PIAS4Q8N2W9 510 aaPredicted RBP19.89■□□□□ 0.77
LINC01712-201ENST00000446227 ABCC9O60706 1549 aa19.86■□□□□ 0.77
LINC01712-201ENST00000446227 MYO15BQ96JP2 1530 aa19.82■□□□□ 0.76
LINC01712-201ENST00000446227 SHROOM4Q9ULL8 1493 aa19.81■□□□□ 0.76
LINC01712-201ENST00000446227 NACADO15069 1562 aa19.67■□□□□ 0.74
LINC01712-201ENST00000446227 RB1CC1Q8TDY2 1594 aa19.47■□□□□ 0.71
LINC01712-201ENST00000446227 SCRIBQ14160 1630 aa19.38■□□□□ 0.69
LINC01712-201ENST00000446227 MSH5O43196 834 aa19.28■□□□□ 0.68
LINC01712-201ENST00000446227 SUPT5HO00267 1087 aaKnown RBP19.16■□□□□ 0.66
LINC01712-201ENST00000446227 UNC13AQ9UPW8 1703 aa18.96■□□□□ 0.63
LINC01712-201ENST00000446227 RSF1Q96T23 1441 aaPredicted RBP18.84■□□□□ 0.61
LINC01712-201ENST00000446227 BICRAQ9NZM4 1560 aa18.81■□□□□ 0.6
LINC01712-201ENST00000446227 CECR2Q9BXF3 1484 aa18.79■□□□□ 0.6
LINC01712-201ENST00000446227 PPP4R3CPQ6ZMV5 832 aa18.77■□□□□ 0.6
LINC01712-201ENST00000446227 PABPN1Q86U42 306 aaKnown RBP eCLIP18.77■□□□□ 0.6
LINC01712-201ENST00000446227 BAZ1AQ9NRL2 1556 aaPredicted RBP18.74■□□□□ 0.59
LINC01712-201ENST00000446227 MROH2BQ7Z745 1585 aa18.71■□□□□ 0.59
LINC01712-201ENST00000446227 SMARCA4P51532 1647 aa18.6■□□□□ 0.57
LINC01712-201ENST00000446227 WIZO95785 1651 aa18.54■□□□□ 0.56
LINC01712-201ENST00000446227 MAPK8IP2Q13387 824 aaPredicted RBP18.51■□□□□ 0.55
LINC01712-201ENST00000446227 KCNA4P22459 653 aa18.48■□□□□ 0.55
LINC01712-201ENST00000446227 SCAF1Q9H7N4 1312 aaKnown RBP18.4■□□□□ 0.54
LINC01712-201ENST00000446227 TOP2AP11388 1531 aaKnown RBP18.39■□□□□ 0.54
LINC01712-201ENST00000446227 PEG3Q9GZU2 1588 aa18.38■□□□□ 0.53
LINC01712-201ENST00000446227 SMARCA2P51531 1590 aa18.32■□□□□ 0.52
LINC01712-201ENST00000446227 ATAD2BQ9ULI0 1458 aa18.3■□□□□ 0.52
LINC01712-201ENST00000446227 EIF4G1Q04637 1599 aaKnown RBP18.26■□□□□ 0.51
LINC01712-201ENST00000446227 BAZ1BQ9UIG0 1483 aaKnown RBP18.22■□□□□ 0.51
LINC01712-201ENST00000446227 CCDC88BA6NC98 1476 aa18.21■□□□□ 0.51
LINC01712-201ENST00000446227 NCBP3Q53F19 620 aaKnown RBP18.16■□□□□ 0.5
LINC01712-201ENST00000446227 CNKSR2Q8WXI2 1034 aa18.15■□□□□ 0.5
LINC01712-201ENST00000446227 NCAPD3P42695 1498 aa18.14■□□□□ 0.5
LINC01712-201ENST00000446227 HMGXB3Q12766 1538 aa18.12■□□□□ 0.49
LINC01712-201ENST00000446227 DMRT2Q9Y5R5 561 aa18.09■□□□□ 0.49
LINC01712-201ENST00000446227 NPM3O75607 178 aaKnown RBP18.05■□□□□ 0.48
LINC01712-201ENST00000446227 TRIM41Q8WV44 630 aa18.05■□□□□ 0.48
LINC01712-201ENST00000446227 CC2D2AQ9P2K1 1620 aa17.97■□□□□ 0.47
LINC01712-201ENST00000446227 ABCC8Q09428 1581 aa17.8■□□□□ 0.44
LINC01712-201ENST00000446227 RNF216Q9NWF9 866 aaPredicted RBP17.78■□□□□ 0.44
LINC01712-201ENST00000446227 WRNQ14191 1432 aaPredicted RBP eCLIP17.76■□□□□ 0.43
LINC01712-201ENST00000446227 CFTRP13569 1480 aa17.75■□□□□ 0.43
LINC01712-201ENST00000446227 HOXD11P31277 338 aaPredicted RBP17.72■□□□□ 0.43
LINC01712-201ENST00000446227 CADPSQ9ULU8 1353 aa17.7■□□□□ 0.42
LINC01712-201ENST00000446227 FAM9AQ8IZU1 332 aaPredicted RBP17.67■□□□□ 0.42
LINC01712-201ENST00000446227 LOC105371045A0A1W2PR82 267 aa17.66■□□□□ 0.42
LINC01712-201ENST00000446227 PRDM2Q13029 1718 aa17.61■□□□□ 0.41
LINC01712-201ENST00000446227 POTEDQ86YR6 584 aa17.61■□□□□ 0.41
LINC01712-201ENST00000446227 EEA1Q15075 1411 aa17.61■□□□□ 0.41
LINC01712-201ENST00000446227 SYNJ1O43426 1573 aa17.61■□□□□ 0.41
LINC01712-201ENST00000446227 TOP2BQ02880 1626 aa17.57■□□□□ 0.4
LINC01712-201ENST00000446227 BIVM-ERCC5R4GMW8 1640 aa17.54■□□□□ 0.4
LINC01712-201ENST00000446227 SLC4A1APQ9BWU0 796 aaKnown RBP17.53■□□□□ 0.4
LINC01712-201ENST00000446227 SOGA1O94964 1423 aa17.52■□□□□ 0.4
LINC01712-201ENST00000446227 LAMC3Q9Y6N6 1575 aa17.51■□□□□ 0.39
LINC01712-201ENST00000446227 CUX1P39880 1505 aa17.49■□□□□ 0.39
LINC01712-201ENST00000446227 CSRNP3Q8WYN3 585 aa17.49■□□□□ 0.39
LINC01712-201ENST00000446227 FANCD2Q9BXW9 1451 aa17.49■□□□□ 0.39
LINC01712-201ENST00000446227 NESP48681 1621 aa17.43■□□□□ 0.38
LINC01712-201ENST00000446227 DNAJC5BQ9UF47 199 aa17.43■□□□□ 0.38
LINC01712-201ENST00000446227 PDS5BQ9NTI5 1447 aa17.42■□□□□ 0.38
LINC01712-201ENST00000446227 RUSC2Q8N2Y8 1516 aa17.42■□□□□ 0.38
LINC01712-201ENST00000446227 DCAF8L1A6NGE4 600 aa17.39■□□□□ 0.37
LINC01712-201ENST00000446227 EHMT2Q96KQ7 1210 aa17.38■□□□□ 0.37
LINC01712-201ENST00000446227 CEP164Q9UPV0 1460 aa17.37■□□□□ 0.37
LINC01712-201ENST00000446227 DNMBPQ6XZF7 1577 aa17.34■□□□□ 0.37
LINC01712-201ENST00000446227 KIF27Q86VH2 1401 aa17.34■□□□□ 0.37
LINC01712-201ENST00000446227 GOLGA3Q08378 1498 aa17.32■□□□□ 0.36
LINC01712-201ENST00000446227 FGD5Q6ZNL6 1462 aa17.31■□□□□ 0.36
LINC01712-201ENST00000446227 TNIKQ9UKE5 1360 aa17.3■□□□□ 0.36
LINC01712-201ENST00000446227 KIF21BO75037 1637 aa17.29■□□□□ 0.36
LINC01712-201ENST00000446227 TOPBP1Q92547 1522 aa17.29■□□□□ 0.36
LINC01712-201ENST00000446227 UBTFP17480 764 aaKnown RBP17.28■□□□□ 0.36
LINC01712-201ENST00000446227 CUX2O14529 1486 aa17.24■□□□□ 0.35
LINC01712-201ENST00000446227 URB2Q14146 1524 aaKnown RBP17.22■□□□□ 0.35
LINC01712-201ENST00000446227 KIF21AQ7Z4S6 1674 aa17.21■□□□□ 0.35
LINC01712-201ENST00000446227 POLA1P09884 1462 aaPredicted RBP17.2■□□□□ 0.34
LINC01712-201ENST00000446227 PRXQ9BXM0 1461 aa17.19■□□□□ 0.34
LINC01712-201ENST00000446227 ERICH3Q5RHP9 1530 aa17.19■□□□□ 0.34
LINC01712-201ENST00000446227 CEP162Q5TB80 1403 aa17.18■□□□□ 0.34
LINC01712-201ENST00000446227 ABCA10Q8WWZ4 1543 aa17.17■□□□□ 0.34
LINC01712-201ENST00000446227 RAPGEF2Q9Y4G8 1499 aa17.17■□□□□ 0.34
LINC01712-201ENST00000446227 MRC2Q9UBG0 1479 aa17.15■□□□□ 0.34
LINC01712-201ENST00000446227 IGF1RP08069 1367 aa17.15■□□□□ 0.34
LINC01712-201ENST00000446227 RAD54L2Q9Y4B4 1467 aa17.14■□□□□ 0.33
LINC01712-201ENST00000446227 ERCC6Q03468 1493 aa17.08■□□□□ 0.32
LINC01712-201ENST00000446227 CARMIL1Q5VZK9 1371 aa17.08■□□□□ 0.32
LINC01712-201ENST00000446227 ZBTB22O15209 634 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms