RNA–Protein interactions for RNA: ENST00000445673.1

LINC00578-203, long intergenic non-protein coding RNA 578, humanhuman

TSL 3

Gene LINC00578, Length 437 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-203ENST00000445673 AEBP2Q6ZN18 517 aaPredicted RBP19.63■□□□□ 0.73
LINC00578-203ENST00000445673 CHIC1Q5VXU3 224 aa18.72■□□□□ 0.59
LINC00578-203ENST00000445673 SENP3Q9H4L4 574 aaPredicted RBP16.72■□□□□ 0.27
LINC00578-203ENST00000445673 PHF23Q9BUL5 403 aaPredicted RBP16.55■□□□□ 0.24
LINC00578-203ENST00000445673 NISCHQ9Y2I1 1504 aa16.19■□□□□ 0.18
LINC00578-203ENST00000445673 FOXD1Q16676 465 aa15.59■□□□□ 0.09
LINC00578-203ENST00000445673 POTEDQ86YR6 584 aa15.22■□□□□ 0.03
LINC00578-203ENST00000445673 PLPPR3Q6T4P5 718 aa14.99□□□□□ -0.01
LINC00578-203ENST00000445673 MSH5O43196 834 aa14.69□□□□□ -0.06
LINC00578-203ENST00000445673 PPP6R1Q9UPN7 881 aa14.66□□□□□ -0.06
LINC00578-203ENST00000445673 ADRA2BP18089 450 aa14.62□□□□□ -0.07
LINC00578-203ENST00000445673 PIAS4Q8N2W9 510 aaPredicted RBP14.58□□□□□ -0.08
LINC00578-203ENST00000445673 CCDC180Q9P1Z9 1646 aa14.43□□□□□ -0.1
LINC00578-203ENST00000445673 ABCC9O60706 1549 aa14.2□□□□□ -0.14
LINC00578-203ENST00000445673 RB1CC1Q8TDY2 1594 aa13.62□□□□□ -0.23
LINC00578-203ENST00000445673 NACADO15069 1562 aa13.6□□□□□ -0.23
LINC00578-203ENST00000445673 DCAF8L2P0C7V8 631 aa13.53□□□□□ -0.24
LINC00578-203ENST00000445673 MYO15BQ96JP2 1530 aa13.51□□□□□ -0.25
LINC00578-203ENST00000445673 ZCCHC6Q5VYS8 1495 aaKnown RBP13.48□□□□□ -0.25
LINC00578-203ENST00000445673 MAPK8IP2Q13387 824 aaPredicted RBP13.42□□□□□ -0.26
LINC00578-203ENST00000445673 DCAF1Q9Y4B6 1507 aa13.41□□□□□ -0.26
LINC00578-203ENST00000445673 SCAF1Q9H7N4 1312 aaKnown RBP13.38□□□□□ -0.27
LINC00578-203ENST00000445673 UNC13AQ9UPW8 1703 aa13.32□□□□□ -0.28
LINC00578-203ENST00000445673 DMRT2Q9Y5R5 561 aa13.28□□□□□ -0.28
LINC00578-203ENST00000445673 PABPN1Q86U42 306 aaKnown RBP eCLIP13.26□□□□□ -0.29
LINC00578-203ENST00000445673 BICRAQ9NZM4 1560 aa13.24□□□□□ -0.29
LINC00578-203ENST00000445673 PPP4R3CPQ6ZMV5 832 aa13.17□□□□□ -0.3
LINC00578-203ENST00000445673 DNAJC5BQ9UF47 199 aa13.16□□□□□ -0.3
LINC00578-203ENST00000445673 SCRIBQ14160 1630 aa13.14□□□□□ -0.31
LINC00578-203ENST00000445673 SHROOM4Q9ULL8 1493 aa13.1□□□□□ -0.31
LINC00578-203ENST00000445673 CACNB1Q02641 598 aaPredicted RBP12.97□□□□□ -0.33
LINC00578-203ENST00000445673 CNKSR2Q8WXI2 1034 aa12.89□□□□□ -0.35
LINC00578-203ENST00000445673 EIF4G1Q04637 1599 aaKnown RBP12.89□□□□□ -0.35
LINC00578-203ENST00000445673 CC2D2AQ9P2K1 1620 aa12.85□□□□□ -0.35
LINC00578-203ENST00000445673 HOXD11P31277 338 aaPredicted RBP12.82□□□□□ -0.36
LINC00578-203ENST00000445673 CECR2Q9BXF3 1484 aa12.78□□□□□ -0.36
LINC00578-203ENST00000445673 DCAF8L1A6NGE4 600 aa12.76□□□□□ -0.37
LINC00578-203ENST00000445673 RNF216Q9NWF9 866 aaPredicted RBP12.75□□□□□ -0.37
LINC00578-203ENST00000445673 NCBP3Q53F19 620 aaKnown RBP12.69□□□□□ -0.38
LINC00578-203ENST00000445673 SMARCA4P51532 1647 aa12.58□□□□□ -0.4
LINC00578-203ENST00000445673 NCAPD3P42695 1498 aa12.57□□□□□ -0.4
LINC00578-203ENST00000445673 ATAD2BQ9ULI0 1458 aa12.55□□□□□ -0.4
LINC00578-203ENST00000445673 BAZ1AQ9NRL2 1556 aaPredicted RBP12.55□□□□□ -0.4
LINC00578-203ENST00000445673 SMARCA2P51531 1590 aa12.52□□□□□ -0.41
LINC00578-203ENST00000445673 NPM3O75607 178 aaKnown RBP12.5□□□□□ -0.41
LINC00578-203ENST00000445673 PEG3Q9GZU2 1588 aa12.48□□□□□ -0.41
LINC00578-203ENST00000445673 HMGXB3Q12766 1538 aa12.48□□□□□ -0.41
LINC00578-203ENST00000445673 RNF39Q9H2S5 420 aa12.48□□□□□ -0.41
LINC00578-203ENST00000445673 MROH2BQ7Z745 1585 aa12.47□□□□□ -0.41
LINC00578-203ENST00000445673 BAZ1BQ9UIG0 1483 aaKnown RBP12.42□□□□□ -0.42
LINC00578-203ENST00000445673 KCNA4P22459 653 aa12.33□□□□□ -0.44
LINC00578-203ENST00000445673 WIZO95785 1651 aa12.32□□□□□ -0.44
LINC00578-203ENST00000445673 RSF1Q96T23 1441 aaPredicted RBP12.31□□□□□ -0.44
LINC00578-203ENST00000445673 NESP48681 1621 aa12.27□□□□□ -0.44
LINC00578-203ENST00000445673 C1QBPQ07021 282 aaKnown RBP12.26□□□□□ -0.45
LINC00578-203ENST00000445673 ERCC6Q03468 1493 aa12.25□□□□□ -0.45
LINC00578-203ENST00000445673 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.24□□□□□ -0.45
LINC00578-203ENST00000445673 LAMC3Q9Y6N6 1575 aa12.23□□□□□ -0.45
LINC00578-203ENST00000445673 TOP2AP11388 1531 aaKnown RBP12.19□□□□□ -0.46
LINC00578-203ENST00000445673 CADPSQ9ULU8 1353 aa12.18□□□□□ -0.46
LINC00578-203ENST00000445673 CUX2O14529 1486 aa12.17□□□□□ -0.46
LINC00578-203ENST00000445673 PDS5BQ9NTI5 1447 aa12.15□□□□□ -0.46
LINC00578-203ENST00000445673 KIF21AQ7Z4S6 1674 aa12.11□□□□□ -0.47
LINC00578-203ENST00000445673 THOC2Q8NI27 1593 aaKnown RBP12.11□□□□□ -0.47
LINC00578-203ENST00000445673 CFTRP13569 1480 aa12.1□□□□□ -0.47
LINC00578-203ENST00000445673 CCDC88BA6NC98 1476 aa12.05□□□□□ -0.48
LINC00578-203ENST00000445673 FANCD2Q9BXW9 1451 aa12.03□□□□□ -0.48
LINC00578-203ENST00000445673 MRC2Q9UBG0 1479 aa12.03□□□□□ -0.48
LINC00578-203ENST00000445673 CEP164Q9UPV0 1460 aa12.02□□□□□ -0.48
LINC00578-203ENST00000445673 WDR62O43379 1518 aa12□□□□□ -0.49
LINC00578-203ENST00000445673 U3KPZ7 1027 aaPredicted RBP11.97□□□□□ -0.49
LINC00578-203ENST00000445673 PRDM2Q13029 1718 aa11.97□□□□□ -0.49
LINC00578-203ENST00000445673 URB2Q14146 1524 aaKnown RBP11.93□□□□□ -0.5
LINC00578-203ENST00000445673 DNAJC5Q9H3Z4 198 aa11.93□□□□□ -0.5
LINC00578-203ENST00000445673 SLC4A2P04920 1241 aa11.91□□□□□ -0.5
LINC00578-203ENST00000445673 SUPT5HO00267 1087 aaKnown RBP11.88□□□□□ -0.51
LINC00578-203ENST00000445673 TOPBP1Q92547 1522 aa11.83□□□□□ -0.52
LINC00578-203ENST00000445673 ABCC8Q09428 1581 aa11.83□□□□□ -0.52
LINC00578-203ENST00000445673 POTEHQ6S545 545 aa11.82□□□□□ -0.52
LINC00578-203ENST00000445673 DNMBPQ6XZF7 1577 aa11.8□□□□□ -0.52
LINC00578-203ENST00000445673 SPINK5Q9NQ38 1064 aaPredicted RBP11.79□□□□□ -0.52
LINC00578-203ENST00000445673 IFT140Q96RY7 1462 aa11.78□□□□□ -0.52
LINC00578-203ENST00000445673 CAPN15O75808 1086 aa11.77□□□□□ -0.53
LINC00578-203ENST00000445673 ZNF608Q9ULD9 1512 aaPredicted RBP11.75□□□□□ -0.53
LINC00578-203ENST00000445673 POLA1P09884 1462 aaPredicted RBP11.73□□□□□ -0.53
LINC00578-203ENST00000445673 TARBP1Q13395 1621 aaKnown RBP11.71□□□□□ -0.53
LINC00578-203ENST00000445673 CUX1P39880 1505 aa11.71□□□□□ -0.53
LINC00578-203ENST00000445673 EIF4G3O43432 1585 aaKnown RBP11.68□□□□□ -0.54
LINC00578-203ENST00000445673 FGD5Q6ZNL6 1462 aa11.68□□□□□ -0.54
LINC00578-203ENST00000445673 DSG3P32926 999 aa11.67□□□□□ -0.54
LINC00578-203ENST00000445673 RAD54L2Q9Y4B4 1467 aa11.67□□□□□ -0.54
LINC00578-203ENST00000445673 SOGA1O94964 1423 aa11.67□□□□□ -0.54
LINC00578-203ENST00000445673 AQRO60306 1485 aaKnown RBP eCLIP11.66□□□□□ -0.54
LINC00578-203ENST00000445673 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.66□□□□□ -0.54
LINC00578-203ENST00000445673 HNRNPUL2Q1KMD3 747 aaKnown RBP11.66□□□□□ -0.54
LINC00578-203ENST00000445673 SLC4A1APQ9BWU0 796 aaKnown RBP11.66□□□□□ -0.54
LINC00578-203ENST00000445673 APLP2Q06481 763 aa11.65□□□□□ -0.54
LINC00578-203ENST00000445673 OSCARQ8IYS5 282 aa11.65□□□□□ -0.54
LINC00578-203ENST00000445673 TDRD9Q8NDG6 1382 aaKnown RBP11.62□□□□□ -0.55
LINC00578-203ENST00000445673 WDR97A6NE52 1622 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms