RNA–Protein interactions for RNA: ENST00000441411.1

SCN7A-204, Transcript of sodium voltage-gated channel alpha subunit 7, humanhuman

TSL 1 (best)

Gene SCN7A, Length 1,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7A-204ENST00000441411 AEBP2Q6ZN18 517 aaPredicted RBP28.9■■■□□ 2.22
SCN7A-204ENST00000441411 CHIC1Q5VXU3 224 aa26.9■■□□□ 1.9
SCN7A-204ENST00000441411 SENP3Q9H4L4 574 aaPredicted RBP24.76■■□□□ 1.55
SCN7A-204ENST00000441411 PHF23Q9BUL5 403 aaPredicted RBP24.31■■□□□ 1.48
SCN7A-204ENST00000441411 POTEDQ86YR6 584 aa23.6■■□□□ 1.37
SCN7A-204ENST00000441411 FOXD1Q16676 465 aa23.26■■□□□ 1.31
SCN7A-204ENST00000441411 NISCHQ9Y2I1 1504 aa22.28■■□□□ 1.16
SCN7A-204ENST00000441411 MSH5O43196 834 aa22.15■■□□□ 1.14
SCN7A-204ENST00000441411 PIAS4Q8N2W9 510 aaPredicted RBP21.4■■□□□ 1.02
SCN7A-204ENST00000441411 PPP6R1Q9UPN7 881 aa20.9■□□□□ 0.94
SCN7A-204ENST00000441411 ADRA2BP18089 450 aa20.73■□□□□ 0.91
SCN7A-204ENST00000441411 PLPPR3Q6T4P5 718 aa20.46■□□□□ 0.87
SCN7A-204ENST00000441411 CCDC180Q9P1Z9 1646 aa20.01■□□□□ 0.79
SCN7A-204ENST00000441411 ABCC9O60706 1549 aa20■□□□□ 0.79
SCN7A-204ENST00000441411 CACNB1Q02641 598 aaPredicted RBP19.69■□□□□ 0.74
SCN7A-204ENST00000441411 DMRT2Q9Y5R5 561 aa19.48■□□□□ 0.71
SCN7A-204ENST00000441411 MAPK8IP2Q13387 824 aaPredicted RBP19.41■□□□□ 0.7
SCN7A-204ENST00000441411 RB1CC1Q8TDY2 1594 aa19.1■□□□□ 0.65
SCN7A-204ENST00000441411 NACADO15069 1562 aa18.98■□□□□ 0.63
SCN7A-204ENST00000441411 SCAF1Q9H7N4 1312 aaKnown RBP18.91■□□□□ 0.62
SCN7A-204ENST00000441411 DCAF8L2P0C7V8 631 aa18.84■□□□□ 0.61
SCN7A-204ENST00000441411 RNF39Q9H2S5 420 aa18.84■□□□□ 0.61
SCN7A-204ENST00000441411 DNAJC5BQ9UF47 199 aa18.77■□□□□ 0.59
SCN7A-204ENST00000441411 MYO15BQ96JP2 1530 aa18.76■□□□□ 0.59
SCN7A-204ENST00000441411 DCAF8L1A6NGE4 600 aa18.66■□□□□ 0.58
SCN7A-204ENST00000441411 PABPN1Q86U42 306 aaKnown RBP eCLIP18.62■□□□□ 0.57
SCN7A-204ENST00000441411 UNC13AQ9UPW8 1703 aa18.48■□□□□ 0.55
SCN7A-204ENST00000441411 C1QBPQ07021 282 aaKnown RBP18.47■□□□□ 0.55
SCN7A-204ENST00000441411 DCAF1Q9Y4B6 1507 aa18.47■□□□□ 0.55
SCN7A-204ENST00000441411 ZCCHC6Q5VYS8 1495 aaKnown RBP18.44■□□□□ 0.54
SCN7A-204ENST00000441411 BICRAQ9NZM4 1560 aa18.44■□□□□ 0.54
SCN7A-204ENST00000441411 SHROOM4Q9ULL8 1493 aa18.39■□□□□ 0.53
SCN7A-204ENST00000441411 HOXD11P31277 338 aaPredicted RBP18.33■□□□□ 0.53
SCN7A-204ENST00000441411 POTEHQ6S545 545 aa18.25■□□□□ 0.51
SCN7A-204ENST00000441411 SCRIBQ14160 1630 aa18.14■□□□□ 0.49
SCN7A-204ENST00000441411 CECR2Q9BXF3 1484 aa18.07■□□□□ 0.48
SCN7A-204ENST00000441411 CC2D2AQ9P2K1 1620 aa18.06■□□□□ 0.48
SCN7A-204ENST00000441411 EIF4G1Q04637 1599 aaKnown RBP18.04■□□□□ 0.48
SCN7A-204ENST00000441411 RNF216Q9NWF9 866 aaPredicted RBP17.87■□□□□ 0.45
SCN7A-204ENST00000441411 PPP4R3CPQ6ZMV5 832 aa17.81■□□□□ 0.44
SCN7A-204ENST00000441411 CNKSR2Q8WXI2 1034 aa17.73■□□□□ 0.43
SCN7A-204ENST00000441411 NCAPD3P42695 1498 aa17.53■□□□□ 0.4
SCN7A-204ENST00000441411 ATAD2BQ9ULI0 1458 aa17.42■□□□□ 0.38
SCN7A-204ENST00000441411 SMARCA2P51531 1590 aa17.42■□□□□ 0.38
SCN7A-204ENST00000441411 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.4■□□□□ 0.38
SCN7A-204ENST00000441411 DNAJC5Q9H3Z4 198 aa17.39■□□□□ 0.37
SCN7A-204ENST00000441411 HMGXB3Q12766 1538 aa17.37■□□□□ 0.37
SCN7A-204ENST00000441411 CUX2O14529 1486 aa17.36■□□□□ 0.37
SCN7A-204ENST00000441411 SMARCA4P51532 1647 aa17.35■□□□□ 0.37
SCN7A-204ENST00000441411 ERCC6Q03468 1493 aa17.34■□□□□ 0.37
SCN7A-204ENST00000441411 BAZ1AQ9NRL2 1556 aaPredicted RBP17.33■□□□□ 0.36
SCN7A-204ENST00000441411 BAZ1BQ9UIG0 1483 aaKnown RBP17.27■□□□□ 0.35
SCN7A-204ENST00000441411 DSG3P32926 999 aa17.25■□□□□ 0.35
SCN7A-204ENST00000441411 PEG3Q9GZU2 1588 aa17.24■□□□□ 0.35
SCN7A-204ENST00000441411 NESP48681 1621 aa17.13■□□□□ 0.33
SCN7A-204ENST00000441411 LAMC3Q9Y6N6 1575 aa17.12■□□□□ 0.33
SCN7A-204ENST00000441411 MROH2BQ7Z745 1585 aa17.11■□□□□ 0.33
SCN7A-204ENST00000441411 PDS5BQ9NTI5 1447 aa17.08■□□□□ 0.32
SCN7A-204ENST00000441411 SPINK5Q9NQ38 1064 aaPredicted RBP17.05■□□□□ 0.32
SCN7A-204ENST00000441411 CAPN15O75808 1086 aa17.03■□□□□ 0.32
SCN7A-204ENST00000441411 CADPSQ9ULU8 1353 aa16.99■□□□□ 0.31
SCN7A-204ENST00000441411 THOC2Q8NI27 1593 aaKnown RBP16.98■□□□□ 0.31
SCN7A-204ENST00000441411 U3KPZ7 1027 aaPredicted RBP16.97■□□□□ 0.31
SCN7A-204ENST00000441411 KIF21AQ7Z4S6 1674 aa16.88■□□□□ 0.29
SCN7A-204ENST00000441411 MRC2Q9UBG0 1479 aa16.86■□□□□ 0.29
SCN7A-204ENST00000441411 WIZO95785 1651 aa16.86■□□□□ 0.29
SCN7A-204ENST00000441411 WDR62O43379 1518 aa16.8■□□□□ 0.28
SCN7A-204ENST00000441411 CEP164Q9UPV0 1460 aa16.8■□□□□ 0.28
SCN7A-204ENST00000441411 RSF1Q96T23 1441 aaPredicted RBP16.79■□□□□ 0.28
SCN7A-204ENST00000441411 CFTRP13569 1480 aa16.77■□□□□ 0.27
SCN7A-204ENST00000441411 FANCD2Q9BXW9 1451 aa16.76■□□□□ 0.27
SCN7A-204ENST00000441411 TOP2AP11388 1531 aaKnown RBP16.73■□□□□ 0.27
SCN7A-204ENST00000441411 NCBP3Q53F19 620 aaKnown RBP16.73■□□□□ 0.27
SCN7A-204ENST00000441411 OSCARQ8IYS5 282 aa16.59■□□□□ 0.25
SCN7A-204ENST00000441411 URB2Q14146 1524 aaKnown RBP16.57■□□□□ 0.24
SCN7A-204ENST00000441411 SP7Q8TDD2 431 aaPredicted RBP16.57■□□□□ 0.24
SCN7A-204ENST00000441411 ABCB7O75027 752 aa16.55■□□□□ 0.24
SCN7A-204ENST00000441411 NPM3O75607 178 aaKnown RBP16.55■□□□□ 0.24
SCN7A-204ENST00000441411 CHRDL2Q6WN34 429 aa16.55■□□□□ 0.24
SCN7A-204ENST00000441411 TRIM41Q8WV44 630 aa16.54■□□□□ 0.24
SCN7A-204ENST00000441411 CCDC88BA6NC98 1476 aa16.54■□□□□ 0.24
SCN7A-204ENST00000441411 ABCC8Q09428 1581 aa16.51■□□□□ 0.23
SCN7A-204ENST00000441411 PRDM2Q13029 1718 aa16.5■□□□□ 0.23
SCN7A-204ENST00000441411 IFT140Q96RY7 1462 aa16.49■□□□□ 0.23
SCN7A-204ENST00000441411 TRHP20396 242 aaPredicted RBP16.48■□□□□ 0.23
SCN7A-204ENST00000441411 RBM42Q9BTD8 480 aaKnown RBP16.43■□□□□ 0.22
SCN7A-204ENST00000441411 TOPBP1Q92547 1522 aa16.42■□□□□ 0.22
SCN7A-204ENST00000441411 ZNF219Q9P2Y4 722 aaPredicted RBP16.41■□□□□ 0.22
SCN7A-204ENST00000441411 DNMBPQ6XZF7 1577 aa16.37■□□□□ 0.21
SCN7A-204ENST00000441411 ZNF608Q9ULD9 1512 aaPredicted RBP16.35■□□□□ 0.21
SCN7A-204ENST00000441411 APLP2Q06481 763 aa16.28■□□□□ 0.2
SCN7A-204ENST00000441411 EIF4G3O43432 1585 aaKnown RBP16.27■□□□□ 0.2
SCN7A-204ENST00000441411 POLA1P09884 1462 aaPredicted RBP16.24■□□□□ 0.19
SCN7A-204ENST00000441411 TARBP1Q13395 1621 aaKnown RBP16.24■□□□□ 0.19
SCN7A-204ENST00000441411 AQRO60306 1485 aaKnown RBP eCLIP16.24■□□□□ 0.19
SCN7A-204ENST00000441411 RIMBP3CA6NJZ7 1639 aa16.23■□□□□ 0.19
SCN7A-204ENST00000441411 RIMBP3BA6NNM3 1639 aa16.23■□□□□ 0.19
SCN7A-204ENST00000441411 RIMBP3Q9UFD9 1639 aa16.23■□□□□ 0.19
SCN7A-204ENST00000441411 SOGA1O94964 1423 aa16.22■□□□□ 0.19
SCN7A-204ENST00000441411 ARHGEF11O15085 1522 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms