RNA–Protein interactions for RNA: ENST00000424976.1

FDPSP1-201, Transcript of farnesyl diphosphate synthase pseudogene 1, humanhuman

BASIC

Gene FDPSP1, Length 1,071 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPSP1-201ENST00000424976 AEBP2Q6ZN18 517 aaPredicted RBP20.3■□□□□ 0.84
FDPSP1-201ENST00000424976 CHIC1Q5VXU3 224 aa19.77■□□□□ 0.76
FDPSP1-201ENST00000424976 NISCHQ9Y2I1 1504 aa17.45■□□□□ 0.38
FDPSP1-201ENST00000424976 PHF23Q9BUL5 403 aaPredicted RBP17.36■□□□□ 0.37
FDPSP1-201ENST00000424976 SENP3Q9H4L4 574 aaPredicted RBP17.27■□□□□ 0.36
FDPSP1-201ENST00000424976 PLPPR3Q6T4P5 718 aa16.04■□□□□ 0.16
FDPSP1-201ENST00000424976 FOXD1Q16676 465 aa16.02■□□□□ 0.16
FDPSP1-201ENST00000424976 CCDC180Q9P1Z9 1646 aa15.52■□□□□ 0.08
FDPSP1-201ENST00000424976 ADRA2BP18089 450 aa15.37■□□□□ 0.05
FDPSP1-201ENST00000424976 PPP6R1Q9UPN7 881 aa15.35■□□□□ 0.05
FDPSP1-201ENST00000424976 PIAS4Q8N2W9 510 aaPredicted RBP15.11■□□□□ 0.01
FDPSP1-201ENST00000424976 MSH5O43196 834 aa14.81□□□□□ -0.04
FDPSP1-201ENST00000424976 ABCC9O60706 1549 aa14.75□□□□□ -0.05
FDPSP1-201ENST00000424976 ZCCHC6Q5VYS8 1495 aaKnown RBP14.6□□□□□ -0.07
FDPSP1-201ENST00000424976 DCAF1Q9Y4B6 1507 aa14.47□□□□□ -0.09
FDPSP1-201ENST00000424976 NACADO15069 1562 aa14.43□□□□□ -0.1
FDPSP1-201ENST00000424976 MYO15BQ96JP2 1530 aa14.42□□□□□ -0.1
FDPSP1-201ENST00000424976 RB1CC1Q8TDY2 1594 aa14.39□□□□□ -0.11
FDPSP1-201ENST00000424976 DCAF8L2P0C7V8 631 aa14.33□□□□□ -0.12
FDPSP1-201ENST00000424976 UNC13AQ9UPW8 1703 aa14.24□□□□□ -0.13
FDPSP1-201ENST00000424976 PPP4R3CPQ6ZMV5 832 aa14.13□□□□□ -0.15
FDPSP1-201ENST00000424976 SCRIBQ14160 1630 aa14.1□□□□□ -0.15
FDPSP1-201ENST00000424976 SCAF1Q9H7N4 1312 aaKnown RBP14.08□□□□□ -0.16
FDPSP1-201ENST00000424976 MAPK8IP2Q13387 824 aaPredicted RBP13.96□□□□□ -0.17
FDPSP1-201ENST00000424976 BICRAQ9NZM4 1560 aa13.95□□□□□ -0.18
FDPSP1-201ENST00000424976 SHROOM4Q9ULL8 1493 aa13.87□□□□□ -0.19
FDPSP1-201ENST00000424976 NCBP3Q53F19 620 aaKnown RBP13.76□□□□□ -0.21
FDPSP1-201ENST00000424976 PABPN1Q86U42 306 aaKnown RBP eCLIP13.75□□□□□ -0.21
FDPSP1-201ENST00000424976 DMRT2Q9Y5R5 561 aa13.75□□□□□ -0.21
FDPSP1-201ENST00000424976 CNKSR2Q8WXI2 1034 aa13.74□□□□□ -0.21
FDPSP1-201ENST00000424976 KCNA4P22459 653 aa13.72□□□□□ -0.21
FDPSP1-201ENST00000424976 POTEDQ86YR6 584 aa13.6□□□□□ -0.23
FDPSP1-201ENST00000424976 EIF4G1Q04637 1599 aaKnown RBP13.54□□□□□ -0.24
FDPSP1-201ENST00000424976 SMARCA4P51532 1647 aa13.53□□□□□ -0.24
FDPSP1-201ENST00000424976 NPM3O75607 178 aaKnown RBP13.52□□□□□ -0.25
FDPSP1-201ENST00000424976 CECR2Q9BXF3 1484 aa13.52□□□□□ -0.25
FDPSP1-201ENST00000424976 BAZ1AQ9NRL2 1556 aaPredicted RBP13.52□□□□□ -0.25
FDPSP1-201ENST00000424976 RNF216Q9NWF9 866 aaPredicted RBP13.48□□□□□ -0.25
FDPSP1-201ENST00000424976 MROH2BQ7Z745 1585 aa13.45□□□□□ -0.26
FDPSP1-201ENST00000424976 HOXD11P31277 338 aaPredicted RBP13.43□□□□□ -0.26
FDPSP1-201ENST00000424976 CC2D2AQ9P2K1 1620 aa13.42□□□□□ -0.26
FDPSP1-201ENST00000424976 PEG3Q9GZU2 1588 aa13.39□□□□□ -0.27
FDPSP1-201ENST00000424976 WIZO95785 1651 aa13.38□□□□□ -0.27
FDPSP1-201ENST00000424976 SMARCA2P51531 1590 aa13.36□□□□□ -0.27
FDPSP1-201ENST00000424976 RSF1Q96T23 1441 aaPredicted RBP13.35□□□□□ -0.27
FDPSP1-201ENST00000424976 ATAD2BQ9ULI0 1458 aa13.3□□□□□ -0.28
FDPSP1-201ENST00000424976 HMGXB3Q12766 1538 aa13.28□□□□□ -0.28
FDPSP1-201ENST00000424976 NCAPD3P42695 1498 aa13.25□□□□□ -0.29
FDPSP1-201ENST00000424976 DCAF8L1A6NGE4 600 aa13.24□□□□□ -0.29
FDPSP1-201ENST00000424976 TOP2AP11388 1531 aaKnown RBP13.23□□□□□ -0.29
FDPSP1-201ENST00000424976 BAZ1BQ9UIG0 1483 aaKnown RBP13.23□□□□□ -0.29
FDPSP1-201ENST00000424976 DNAJC5BQ9UF47 199 aa13.22□□□□□ -0.29
FDPSP1-201ENST00000424976 SUPT5HO00267 1087 aaKnown RBP13.17□□□□□ -0.3
FDPSP1-201ENST00000424976 SLC4A1APQ9BWU0 796 aaKnown RBP13.07□□□□□ -0.32
FDPSP1-201ENST00000424976 PRDM2Q13029 1718 aa13.05□□□□□ -0.32
FDPSP1-201ENST00000424976 CCDC88BA6NC98 1476 aa13.02□□□□□ -0.33
FDPSP1-201ENST00000424976 LAMC3Q9Y6N6 1575 aa12.94□□□□□ -0.34
FDPSP1-201ENST00000424976 KIF21AQ7Z4S6 1674 aa12.86□□□□□ -0.35
FDPSP1-201ENST00000424976 CFTRP13569 1480 aa12.86□□□□□ -0.35
FDPSP1-201ENST00000424976 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.86□□□□□ -0.35
FDPSP1-201ENST00000424976 NESP48681 1621 aa12.85□□□□□ -0.35
FDPSP1-201ENST00000424976 CADPSQ9ULU8 1353 aa12.85□□□□□ -0.35
FDPSP1-201ENST00000424976 SLC4A2P04920 1241 aa12.78□□□□□ -0.36
FDPSP1-201ENST00000424976 PDS5BQ9NTI5 1447 aa12.75□□□□□ -0.37
FDPSP1-201ENST00000424976 FANCD2Q9BXW9 1451 aa12.73□□□□□ -0.37
FDPSP1-201ENST00000424976 CEP164Q9UPV0 1460 aa12.72□□□□□ -0.37
FDPSP1-201ENST00000424976 THOC2Q8NI27 1593 aaKnown RBP12.69□□□□□ -0.38
FDPSP1-201ENST00000424976 ERCC6Q03468 1493 aa12.69□□□□□ -0.38
FDPSP1-201ENST00000424976 ABCC8Q09428 1581 aa12.67□□□□□ -0.38
FDPSP1-201ENST00000424976 BIVM-ERCC5R4GMW8 1640 aa12.66□□□□□ -0.38
FDPSP1-201ENST00000424976 RNF39Q9H2S5 420 aa12.66□□□□□ -0.38
FDPSP1-201ENST00000424976 DNMBPQ6XZF7 1577 aa12.64□□□□□ -0.39
FDPSP1-201ENST00000424976 FOXD4L1Q9NU39 408 aa12.64□□□□□ -0.39
FDPSP1-201ENST00000424976 MRC2Q9UBG0 1479 aa12.64□□□□□ -0.39
FDPSP1-201ENST00000424976 EHMT2Q96KQ7 1210 aa12.63□□□□□ -0.39
FDPSP1-201ENST00000424976 TOP2BQ02880 1626 aa12.62□□□□□ -0.39
FDPSP1-201ENST00000424976 WDR62O43379 1518 aa12.62□□□□□ -0.39
FDPSP1-201ENST00000424976 SYNJ1O43426 1573 aa12.61□□□□□ -0.39
FDPSP1-201ENST00000424976 CUX1P39880 1505 aa12.61□□□□□ -0.39
FDPSP1-201ENST00000424976 URB2Q14146 1524 aaKnown RBP12.61□□□□□ -0.39
FDPSP1-201ENST00000424976 U3KPZ7 1027 aaPredicted RBP12.6□□□□□ -0.39
FDPSP1-201ENST00000424976 TOPBP1Q92547 1522 aa12.59□□□□□ -0.39
FDPSP1-201ENST00000424976 ZBTB22O15209 634 aa12.59□□□□□ -0.39
FDPSP1-201ENST00000424976 WRNQ14191 1432 aaPredicted RBP eCLIP12.59□□□□□ -0.39
FDPSP1-201ENST00000424976 WDR97A6NE52 1622 aa12.53□□□□□ -0.4
FDPSP1-201ENST00000424976 C1QBPQ07021 282 aaKnown RBP12.53□□□□□ -0.4
FDPSP1-201ENST00000424976 MYCNP04198 464 aaPredicted RBP12.51□□□□□ -0.41
FDPSP1-201ENST00000424976 FGD5Q6ZNL6 1462 aa12.51□□□□□ -0.41
FDPSP1-201ENST00000424976 POLA1P09884 1462 aaPredicted RBP12.49□□□□□ -0.41
FDPSP1-201ENST00000424976 TARBP1Q13395 1621 aaKnown RBP12.48□□□□□ -0.41
FDPSP1-201ENST00000424976 CSRNP3Q8WYN3 585 aa12.48□□□□□ -0.41
FDPSP1-201ENST00000424976 CUX2O14529 1486 aa12.47□□□□□ -0.41
FDPSP1-201ENST00000424976 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.44□□□□□ -0.42
FDPSP1-201ENST00000424976 CACNB1Q02641 598 aaPredicted RBP12.44□□□□□ -0.42
FDPSP1-201ENST00000424976 HNRNPUL2Q1KMD3 747 aaKnown RBP12.44□□□□□ -0.42
FDPSP1-201ENST00000424976 TRIM41Q8WV44 630 aa12.44□□□□□ -0.42
FDPSP1-201ENST00000424976 IFT140Q96RY7 1462 aa12.42□□□□□ -0.42
FDPSP1-201ENST00000424976 PBRM1Q86U86 1689 aa12.42□□□□□ -0.42
FDPSP1-201ENST00000424976 RAD54L2Q9Y4B4 1467 aa12.41□□□□□ -0.42
FDPSP1-201ENST00000424976 SOGA1O94964 1423 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms