RNA–Protein interactions for RNA: ENST00000421604.1

AP001116.1-201, humanhuman

TSL 3 BASIC

Gene AP001116.1, Length 762 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001116.1-201ENST00000421604 AEBP2Q6ZN18 517 aaPredicted RBP24.06■■□□□ 1.44
AP001116.1-201ENST00000421604 CHIC1Q5VXU3 224 aa22.99■■□□□ 1.27
AP001116.1-201ENST00000421604 SENP3Q9H4L4 574 aaPredicted RBP20.49■□□□□ 0.87
AP001116.1-201ENST00000421604 PHF23Q9BUL5 403 aaPredicted RBP20.26■□□□□ 0.83
AP001116.1-201ENST00000421604 NISCHQ9Y2I1 1504 aa20.24■□□□□ 0.83
AP001116.1-201ENST00000421604 FOXD1Q16676 465 aa19.08■□□□□ 0.64
AP001116.1-201ENST00000421604 PLPPR3Q6T4P5 718 aa18.45■□□□□ 0.54
AP001116.1-201ENST00000421604 CCDC180Q9P1Z9 1646 aa18.03■□□□□ 0.48
AP001116.1-201ENST00000421604 PPP6R1Q9UPN7 881 aa17.98■□□□□ 0.47
AP001116.1-201ENST00000421604 ADRA2BP18089 450 aa17.95■□□□□ 0.46
AP001116.1-201ENST00000421604 PIAS4Q8N2W9 510 aaPredicted RBP17.9■□□□□ 0.46
AP001116.1-201ENST00000421604 MSH5O43196 834 aa17.78■□□□□ 0.44
AP001116.1-201ENST00000421604 ABCC9O60706 1549 aa17.38■□□□□ 0.37
AP001116.1-201ENST00000421604 POTEDQ86YR6 584 aa17.1■□□□□ 0.33
AP001116.1-201ENST00000421604 ZCCHC6Q5VYS8 1495 aaKnown RBP16.93■□□□□ 0.3
AP001116.1-201ENST00000421604 NACADO15069 1562 aa16.85■□□□□ 0.29
AP001116.1-201ENST00000421604 RB1CC1Q8TDY2 1594 aa16.84■□□□□ 0.29
AP001116.1-201ENST00000421604 MYO15BQ96JP2 1530 aa16.8■□□□□ 0.28
AP001116.1-201ENST00000421604 DCAF1Q9Y4B6 1507 aa16.79■□□□□ 0.28
AP001116.1-201ENST00000421604 DCAF8L2P0C7V8 631 aa16.71■□□□□ 0.27
AP001116.1-201ENST00000421604 UNC13AQ9UPW8 1703 aa16.5■□□□□ 0.23
AP001116.1-201ENST00000421604 MAPK8IP2Q13387 824 aaPredicted RBP16.44■□□□□ 0.22
AP001116.1-201ENST00000421604 SCRIBQ14160 1630 aa16.42■□□□□ 0.22
AP001116.1-201ENST00000421604 SCAF1Q9H7N4 1312 aaKnown RBP16.4■□□□□ 0.22
AP001116.1-201ENST00000421604 BICRAQ9NZM4 1560 aa16.31■□□□□ 0.2
AP001116.1-201ENST00000421604 DMRT2Q9Y5R5 561 aa16.27■□□□□ 0.2
AP001116.1-201ENST00000421604 PPP4R3CPQ6ZMV5 832 aa16.21■□□□□ 0.19
AP001116.1-201ENST00000421604 SHROOM4Q9ULL8 1493 aa16.2■□□□□ 0.18
AP001116.1-201ENST00000421604 KCNA4P22459 653 aa16.19■□□□□ 0.18
AP001116.1-201ENST00000421604 PABPN1Q86U42 306 aaKnown RBP eCLIP16.18■□□□□ 0.18
AP001116.1-201ENST00000421604 EIF4G1Q04637 1599 aaKnown RBP15.88■□□□□ 0.13
AP001116.1-201ENST00000421604 CNKSR2Q8WXI2 1034 aa15.85■□□□□ 0.13
AP001116.1-201ENST00000421604 NCBP3Q53F19 620 aaKnown RBP15.83■□□□□ 0.12
AP001116.1-201ENST00000421604 CC2D2AQ9P2K1 1620 aa15.77■□□□□ 0.12
AP001116.1-201ENST00000421604 SMARCA4P51532 1647 aa15.72■□□□□ 0.11
AP001116.1-201ENST00000421604 HOXD11P31277 338 aaPredicted RBP15.72■□□□□ 0.11
AP001116.1-201ENST00000421604 CECR2Q9BXF3 1484 aa15.71■□□□□ 0.11
AP001116.1-201ENST00000421604 BAZ1AQ9NRL2 1556 aaPredicted RBP15.71■□□□□ 0.11
AP001116.1-201ENST00000421604 DNAJC5BQ9UF47 199 aa15.69■□□□□ 0.1
AP001116.1-201ENST00000421604 EHMT2Q96KQ7 1210 aa15.68■□□□□ 0.1
AP001116.1-201ENST00000421604 DCAF8L1A6NGE4 600 aa15.67■□□□□ 0.1
AP001116.1-201ENST00000421604 RNF216Q9NWF9 866 aaPredicted RBP15.65■□□□□ 0.1
AP001116.1-201ENST00000421604 MROH2BQ7Z745 1585 aa15.6■□□□□ 0.09
AP001116.1-201ENST00000421604 SMARCA2P51531 1590 aa15.58■□□□□ 0.08
AP001116.1-201ENST00000421604 PEG3Q9GZU2 1588 aa15.57■□□□□ 0.08
AP001116.1-201ENST00000421604 SLC4A1APQ9BWU0 796 aaKnown RBP15.56■□□□□ 0.08
AP001116.1-201ENST00000421604 ATAD2BQ9ULI0 1458 aa15.54■□□□□ 0.08
AP001116.1-201ENST00000421604 HMGXB3Q12766 1538 aa15.51■□□□□ 0.07
AP001116.1-201ENST00000421604 NPM3O75607 178 aaKnown RBP15.5■□□□□ 0.07
AP001116.1-201ENST00000421604 NCAPD3P42695 1498 aa15.49■□□□□ 0.07
AP001116.1-201ENST00000421604 WIZO95785 1651 aa15.47■□□□□ 0.07
AP001116.1-201ENST00000421604 BAZ1BQ9UIG0 1483 aaKnown RBP15.45■□□□□ 0.06
AP001116.1-201ENST00000421604 RSF1Q96T23 1441 aaPredicted RBP15.44■□□□□ 0.06
AP001116.1-201ENST00000421604 TOP2AP11388 1531 aaKnown RBP15.33■□□□□ 0.05
AP001116.1-201ENST00000421604 CSRNP3Q8WYN3 585 aa15.25■□□□□ 0.03
AP001116.1-201ENST00000421604 CACNB1Q02641 598 aaPredicted RBP15.2■□□□□ 0.02
AP001116.1-201ENST00000421604 RNF39Q9H2S5 420 aa15.19■□□□□ 0.02
AP001116.1-201ENST00000421604 LAMC3Q9Y6N6 1575 aa15.12■□□□□ 0.01
AP001116.1-201ENST00000421604 SUPT5HO00267 1087 aaKnown RBP15.1■□□□□ 0.01
AP001116.1-201ENST00000421604 CCDC88BA6NC98 1476 aa15.08■□□□□ 0.01
AP001116.1-201ENST00000421604 NESP48681 1621 aa15.08■□□□□ 0
AP001116.1-201ENST00000421604 PRDM2Q13029 1718 aa15.04■□□□□ -0
AP001116.1-201ENST00000421604 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.04■□□□□ -0
AP001116.1-201ENST00000421604 CADPSQ9ULU8 1353 aa15.03■□□□□ -0
AP001116.1-201ENST00000421604 CFTRP13569 1480 aa15.01□□□□□ -0.01
AP001116.1-201ENST00000421604 KIF21AQ7Z4S6 1674 aa15□□□□□ -0.01
AP001116.1-201ENST00000421604 ERCC6Q03468 1493 aa14.99□□□□□ -0.01
AP001116.1-201ENST00000421604 C1QBPQ07021 282 aaKnown RBP14.98□□□□□ -0.01
AP001116.1-201ENST00000421604 PDS5BQ9NTI5 1447 aa14.96□□□□□ -0.01
AP001116.1-201ENST00000421604 THOC2Q8NI27 1593 aaKnown RBP14.91□□□□□ -0.02
AP001116.1-201ENST00000421604 FANCD2Q9BXW9 1451 aa14.9□□□□□ -0.02
AP001116.1-201ENST00000421604 CEP164Q9UPV0 1460 aa14.89□□□□□ -0.03
AP001116.1-201ENST00000421604 ZBTB22O15209 634 aa14.86□□□□□ -0.03
AP001116.1-201ENST00000421604 MRC2Q9UBG0 1479 aa14.83□□□□□ -0.03
AP001116.1-201ENST00000421604 WDR62O43379 1518 aa14.81□□□□□ -0.04
AP001116.1-201ENST00000421604 FOXD4L1Q9NU39 408 aa14.79□□□□□ -0.04
AP001116.1-201ENST00000421604 CUX2O14529 1486 aa14.78□□□□□ -0.04
AP001116.1-201ENST00000421604 URB2Q14146 1524 aaKnown RBP14.75□□□□□ -0.05
AP001116.1-201ENST00000421604 DNMBPQ6XZF7 1577 aa14.73□□□□□ -0.05
AP001116.1-201ENST00000421604 U3KPZ7 1027 aaPredicted RBP14.71□□□□□ -0.05
AP001116.1-201ENST00000421604 TOPBP1Q92547 1522 aa14.69□□□□□ -0.06
AP001116.1-201ENST00000421604 ABCC8Q09428 1581 aa14.68□□□□□ -0.06
AP001116.1-201ENST00000421604 SLC4A2P04920 1241 aa14.66□□□□□ -0.06
AP001116.1-201ENST00000421604 CUX1P39880 1505 aa14.64□□□□□ -0.07
AP001116.1-201ENST00000421604 BIVM-ERCC5R4GMW8 1640 aa14.61□□□□□ -0.07
AP001116.1-201ENST00000421604 SYNJ1O43426 1573 aa14.59□□□□□ -0.07
AP001116.1-201ENST00000421604 TOP2BQ02880 1626 aa14.59□□□□□ -0.07
AP001116.1-201ENST00000421604 WRNQ14191 1432 aaPredicted RBP eCLIP14.58□□□□□ -0.07
AP001116.1-201ENST00000421604 POLA1P09884 1462 aaPredicted RBP14.57□□□□□ -0.08
AP001116.1-201ENST00000421604 FGD5Q6ZNL6 1462 aa14.57□□□□□ -0.08
AP001116.1-201ENST00000421604 IFT140Q96RY7 1462 aa14.56□□□□□ -0.08
AP001116.1-201ENST00000421604 TARBP1Q13395 1621 aaKnown RBP14.55□□□□□ -0.08
AP001116.1-201ENST00000421604 WDR97A6NE52 1622 aa14.52□□□□□ -0.08
AP001116.1-201ENST00000421604 EIF4G3O43432 1585 aaKnown RBP14.5□□□□□ -0.09
AP001116.1-201ENST00000421604 RAD54L2Q9Y4B4 1467 aa14.47□□□□□ -0.09
AP001116.1-201ENST00000421604 SPINK5Q9NQ38 1064 aaPredicted RBP14.47□□□□□ -0.09
AP001116.1-201ENST00000421604 ZNF608Q9ULD9 1512 aaPredicted RBP14.46□□□□□ -0.09
AP001116.1-201ENST00000421604 SOGA1O94964 1423 aa14.46□□□□□ -0.09
AP001116.1-201ENST00000421604 CAPN15O75808 1086 aa14.45□□□□□ -0.1
AP001116.1-201ENST00000421604 ABCA10Q8WWZ4 1543 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms