RNA–Protein interactions for RNA: ENST00000421133.6

CD33-203, Transcript of CD33 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD33, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD33-203ENST00000421133 AEBP2Q6ZN18 517 aaPredicted RBP18.3■□□□□ 0.52
CD33-203ENST00000421133 CHIC1Q5VXU3 224 aa17.03■□□□□ 0.32
CD33-203ENST00000421133 SENP3Q9H4L4 574 aaPredicted RBP15.64■□□□□ 0.09
CD33-203ENST00000421133 NISCHQ9Y2I1 1504 aa15.6■□□□□ 0.09
CD33-203ENST00000421133 PHF23Q9BUL5 403 aaPredicted RBP15.4■□□□□ 0.06
CD33-203ENST00000421133 POTEDQ86YR6 584 aa14.9□□□□□ -0.02
CD33-203ENST00000421133 FOXD1Q16676 465 aa14.69□□□□□ -0.06
CD33-203ENST00000421133 MSH5O43196 834 aa13.9□□□□□ -0.18
CD33-203ENST00000421133 ABCC9O60706 1549 aa13.85□□□□□ -0.19
CD33-203ENST00000421133 PIAS4Q8N2W9 510 aaPredicted RBP13.57□□□□□ -0.24
CD33-203ENST00000421133 CCDC180Q9P1Z9 1646 aa13.57□□□□□ -0.24
CD33-203ENST00000421133 PPP6R1Q9UPN7 881 aa13.34□□□□□ -0.27
CD33-203ENST00000421133 ADRA2BP18089 450 aa13.26□□□□□ -0.29
CD33-203ENST00000421133 DNAJC5BQ9UF47 199 aa13.22□□□□□ -0.29
CD33-203ENST00000421133 PLPPR3Q6T4P5 718 aa13.17□□□□□ -0.3
CD33-203ENST00000421133 ZCCHC6Q5VYS8 1495 aaKnown RBP13.11□□□□□ -0.31
CD33-203ENST00000421133 RB1CC1Q8TDY2 1594 aa13.08□□□□□ -0.32
CD33-203ENST00000421133 DCAF8L2P0C7V8 631 aa12.97□□□□□ -0.33
CD33-203ENST00000421133 NACADO15069 1562 aa12.93□□□□□ -0.34
CD33-203ENST00000421133 DCAF1Q9Y4B6 1507 aa12.91□□□□□ -0.34
CD33-203ENST00000421133 PABPN1Q86U42 306 aaKnown RBP eCLIP12.88□□□□□ -0.35
CD33-203ENST00000421133 SHROOM4Q9ULL8 1493 aa12.78□□□□□ -0.36
CD33-203ENST00000421133 MYO15BQ96JP2 1530 aa12.76□□□□□ -0.37
CD33-203ENST00000421133 UNC13AQ9UPW8 1703 aa12.68□□□□□ -0.38
CD33-203ENST00000421133 BICRAQ9NZM4 1560 aa12.65□□□□□ -0.38
CD33-203ENST00000421133 CECR2Q9BXF3 1484 aa12.53□□□□□ -0.4
CD33-203ENST00000421133 SCRIBQ14160 1630 aa12.48□□□□□ -0.41
CD33-203ENST00000421133 CC2D2AQ9P2K1 1620 aa12.48□□□□□ -0.41
CD33-203ENST00000421133 EIF4G1Q04637 1599 aaKnown RBP12.4□□□□□ -0.42
CD33-203ENST00000421133 DNAJC5Q9H3Z4 198 aa12.38□□□□□ -0.43
CD33-203ENST00000421133 SUPT5HO00267 1087 aaKnown RBP12.36□□□□□ -0.43
CD33-203ENST00000421133 MAPK8IP2Q13387 824 aaPredicted RBP12.36□□□□□ -0.43
CD33-203ENST00000421133 DMRT2Q9Y5R5 561 aa12.33□□□□□ -0.44
CD33-203ENST00000421133 CACNB1Q02641 598 aaPredicted RBP12.3□□□□□ -0.44
CD33-203ENST00000421133 RSF1Q96T23 1441 aaPredicted RBP12.12□□□□□ -0.47
CD33-203ENST00000421133 BAZ1AQ9NRL2 1556 aaPredicted RBP12.07□□□□□ -0.48
CD33-203ENST00000421133 CUX2O14529 1486 aa12.07□□□□□ -0.48
CD33-203ENST00000421133 SCAF1Q9H7N4 1312 aaKnown RBP12.07□□□□□ -0.48
CD33-203ENST00000421133 MROH2BQ7Z745 1585 aa12.03□□□□□ -0.48
CD33-203ENST00000421133 ERCC6Q03468 1493 aa12.02□□□□□ -0.49
CD33-203ENST00000421133 SMARCA4P51532 1647 aa11.96□□□□□ -0.5
CD33-203ENST00000421133 NCAPD3P42695 1498 aa11.95□□□□□ -0.5
CD33-203ENST00000421133 DCAF8L1A6NGE4 600 aa11.88□□□□□ -0.51
CD33-203ENST00000421133 WIZO95785 1651 aa11.87□□□□□ -0.51
CD33-203ENST00000421133 ATAD2BQ9ULI0 1458 aa11.87□□□□□ -0.51
CD33-203ENST00000421133 TOP2AP11388 1531 aaKnown RBP11.86□□□□□ -0.51
CD33-203ENST00000421133 RNF39Q9H2S5 420 aa11.84□□□□□ -0.51
CD33-203ENST00000421133 SMARCA2P51531 1590 aa11.83□□□□□ -0.52
CD33-203ENST00000421133 HMGXB3Q12766 1538 aa11.81□□□□□ -0.52
CD33-203ENST00000421133 PEG3Q9GZU2 1588 aa11.81□□□□□ -0.52
CD33-203ENST00000421133 NESP48681 1621 aa11.8□□□□□ -0.52
CD33-203ENST00000421133 BAZ1BQ9UIG0 1483 aaKnown RBP11.76□□□□□ -0.53
CD33-203ENST00000421133 TRIM41Q8WV44 630 aa11.73□□□□□ -0.53
CD33-203ENST00000421133 CCDC88BA6NC98 1476 aa11.72□□□□□ -0.53
CD33-203ENST00000421133 THOC2Q8NI27 1593 aaKnown RBP11.71□□□□□ -0.53
CD33-203ENST00000421133 LAMC3Q9Y6N6 1575 aa11.71□□□□□ -0.54
CD33-203ENST00000421133 PDS5BQ9NTI5 1447 aa11.69□□□□□ -0.54
CD33-203ENST00000421133 HOXD11P31277 338 aaPredicted RBP11.66□□□□□ -0.54
CD33-203ENST00000421133 C1QBPQ07021 282 aaKnown RBP11.62□□□□□ -0.55
CD33-203ENST00000421133 KIF21AQ7Z4S6 1674 aa11.61□□□□□ -0.55
CD33-203ENST00000421133 CADPSQ9ULU8 1353 aa11.59□□□□□ -0.55
CD33-203ENST00000421133 MRC2Q9UBG0 1479 aa11.57□□□□□ -0.56
CD33-203ENST00000421133 OSCARQ8IYS5 282 aa11.53□□□□□ -0.56
CD33-203ENST00000421133 WDR62O43379 1518 aa11.53□□□□□ -0.56
CD33-203ENST00000421133 POTEHQ6S545 545 aa11.5□□□□□ -0.57
CD33-203ENST00000421133 PPP4R3CPQ6ZMV5 832 aa11.49□□□□□ -0.57
CD33-203ENST00000421133 CEP164Q9UPV0 1460 aa11.48□□□□□ -0.57
CD33-203ENST00000421133 WRNQ14191 1432 aaPredicted RBP eCLIP11.46□□□□□ -0.57
CD33-203ENST00000421133 CFTRP13569 1480 aa11.44□□□□□ -0.58
CD33-203ENST00000421133 FANCD2Q9BXW9 1451 aa11.44□□□□□ -0.58
CD33-203ENST00000421133 ABCC8Q09428 1581 aa11.44□□□□□ -0.58
CD33-203ENST00000421133 RNF216Q9NWF9 866 aaPredicted RBP11.41□□□□□ -0.58
CD33-203ENST00000421133 FAM9AQ8IZU1 332 aaPredicted RBP11.4□□□□□ -0.58
CD33-203ENST00000421133 CNKSR2Q8WXI2 1034 aa11.38□□□□□ -0.59
CD33-203ENST00000421133 EEA1Q15075 1411 aa11.35□□□□□ -0.59
CD33-203ENST00000421133 URB2Q14146 1524 aaKnown RBP11.34□□□□□ -0.59
CD33-203ENST00000421133 LOC105371045A0A1W2PR82 267 aa11.33□□□□□ -0.6
CD33-203ENST00000421133 SYNJ1O43426 1573 aa11.32□□□□□ -0.6
CD33-203ENST00000421133 RIMBP3CA6NJZ7 1639 aa11.31□□□□□ -0.6
CD33-203ENST00000421133 RIMBP3BA6NNM3 1639 aa11.31□□□□□ -0.6
CD33-203ENST00000421133 RIMBP3Q9UFD9 1639 aa11.31□□□□□ -0.6
CD33-203ENST00000421133 TOP2BQ02880 1626 aa11.29□□□□□ -0.6
CD33-203ENST00000421133 SOGA1O94964 1423 aa11.27□□□□□ -0.6
CD33-203ENST00000421133 IFT140Q96RY7 1462 aa11.27□□□□□ -0.6
CD33-203ENST00000421133 ARHGEF11O15085 1522 aa11.27□□□□□ -0.61
CD33-203ENST00000421133 CSRNP3Q8WYN3 585 aa11.27□□□□□ -0.61
CD33-203ENST00000421133 CYB5RLQ6IPT4 315 aa11.26□□□□□ -0.61
CD33-203ENST00000421133 CUX1P39880 1505 aa11.25□□□□□ -0.61
CD33-203ENST00000421133 BIVM-ERCC5R4GMW8 1640 aa11.24□□□□□ -0.61
CD33-203ENST00000421133 ZNF608Q9ULD9 1512 aaPredicted RBP11.24□□□□□ -0.61
CD33-203ENST00000421133 TRHP20396 242 aaPredicted RBP11.23□□□□□ -0.61
CD33-203ENST00000421133 PRDM2Q13029 1718 aa11.23□□□□□ -0.61
CD33-203ENST00000421133 EHMT2Q96KQ7 1210 aa11.22□□□□□ -0.61
CD33-203ENST00000421133 KIF27Q86VH2 1401 aa11.19□□□□□ -0.62
CD33-203ENST00000421133 RUSC2Q8N2Y8 1516 aa11.19□□□□□ -0.62
CD33-203ENST00000421133 TOPBP1Q92547 1522 aa11.18□□□□□ -0.62
CD33-203ENST00000421133 GOLGA3Q08378 1498 aa11.18□□□□□ -0.62
CD33-203ENST00000421133 DNMBPQ6XZF7 1577 aa11.17□□□□□ -0.62
CD33-203ENST00000421133 FBLN2P98095 1184 aa11.16□□□□□ -0.62
CD33-203ENST00000421133 FGD5Q6ZNL6 1462 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms