RNA–Protein interactions for RNA: ENST00000419440.1

AP000844.2-201, humanhuman

TSL 4 BASIC

Gene AP000844.2, Length 509 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000844.2-201ENST00000419440 AEBP2Q6ZN18 517 aaPredicted RBP29.48■■■□□ 2.31
AP000844.2-201ENST00000419440 CHIC1Q5VXU3 224 aa28.12■■■□□ 2.09
AP000844.2-201ENST00000419440 SENP3Q9H4L4 574 aaPredicted RBP25.3■■□□□ 1.64
AP000844.2-201ENST00000419440 PHF23Q9BUL5 403 aaPredicted RBP24.92■■□□□ 1.58
AP000844.2-201ENST00000419440 NISCHQ9Y2I1 1504 aa23.74■■□□□ 1.39
AP000844.2-201ENST00000419440 FOXD1Q16676 465 aa23.48■■□□□ 1.35
AP000844.2-201ENST00000419440 PLPPR3Q6T4P5 718 aa22.55■■□□□ 1.2
AP000844.2-201ENST00000419440 MSH5O43196 834 aa22.09■■□□□ 1.13
AP000844.2-201ENST00000419440 PIAS4Q8N2W9 510 aaPredicted RBP22.01■■□□□ 1.11
AP000844.2-201ENST00000419440 PPP6R1Q9UPN7 881 aa21.92■■□□□ 1.1
AP000844.2-201ENST00000419440 ADRA2BP18089 450 aa21.9■■□□□ 1.1
AP000844.2-201ENST00000419440 POTEDQ86YR6 584 aa21.4■■□□□ 1.02
AP000844.2-201ENST00000419440 CCDC180Q9P1Z9 1646 aa21.31■■□□□ 1
AP000844.2-201ENST00000419440 ABCC9O60706 1549 aa20.96■□□□□ 0.95
AP000844.2-201ENST00000419440 SCAF1Q9H7N4 1312 aaKnown RBP20.21■□□□□ 0.83
AP000844.2-201ENST00000419440 RB1CC1Q8TDY2 1594 aa20.14■□□□□ 0.81
AP000844.2-201ENST00000419440 NACADO15069 1562 aa20.08■□□□□ 0.8
AP000844.2-201ENST00000419440 MAPK8IP2Q13387 824 aaPredicted RBP20.07■□□□□ 0.8
AP000844.2-201ENST00000419440 DMRT2Q9Y5R5 561 aa20.03■□□□□ 0.8
AP000844.2-201ENST00000419440 MYO15BQ96JP2 1530 aa19.94■□□□□ 0.78
AP000844.2-201ENST00000419440 DCAF8L2P0C7V8 631 aa19.75■□□□□ 0.75
AP000844.2-201ENST00000419440 ZCCHC6Q5VYS8 1495 aaKnown RBP19.73■□□□□ 0.75
AP000844.2-201ENST00000419440 PPP4R3CPQ6ZMV5 832 aa19.72■□□□□ 0.75
AP000844.2-201ENST00000419440 DCAF1Q9Y4B6 1507 aa19.71■□□□□ 0.75
AP000844.2-201ENST00000419440 UNC13AQ9UPW8 1703 aa19.67■□□□□ 0.74
AP000844.2-201ENST00000419440 BICRAQ9NZM4 1560 aa19.53■□□□□ 0.72
AP000844.2-201ENST00000419440 PABPN1Q86U42 306 aaKnown RBP eCLIP19.48■□□□□ 0.71
AP000844.2-201ENST00000419440 DNAJC5BQ9UF47 199 aa19.46■□□□□ 0.71
AP000844.2-201ENST00000419440 SHROOM4Q9ULL8 1493 aa19.42■□□□□ 0.7
AP000844.2-201ENST00000419440 CNKSR2Q8WXI2 1034 aa19.38■□□□□ 0.69
AP000844.2-201ENST00000419440 HOXD11P31277 338 aaPredicted RBP19.29■□□□□ 0.68
AP000844.2-201ENST00000419440 SCRIBQ14160 1630 aa19.29■□□□□ 0.68
AP000844.2-201ENST00000419440 DCAF8L1A6NGE4 600 aa19.26■□□□□ 0.67
AP000844.2-201ENST00000419440 RNF216Q9NWF9 866 aaPredicted RBP19.19■□□□□ 0.66
AP000844.2-201ENST00000419440 NCBP3Q53F19 620 aaKnown RBP19.08■□□□□ 0.64
AP000844.2-201ENST00000419440 EIF4G1Q04637 1599 aaKnown RBP19.03■□□□□ 0.64
AP000844.2-201ENST00000419440 CC2D2AQ9P2K1 1620 aa19■□□□□ 0.63
AP000844.2-201ENST00000419440 CECR2Q9BXF3 1484 aa18.91■□□□□ 0.62
AP000844.2-201ENST00000419440 CACNB1Q02641 598 aaPredicted RBP18.91■□□□□ 0.62
AP000844.2-201ENST00000419440 RNF39Q9H2S5 420 aa18.76■□□□□ 0.59
AP000844.2-201ENST00000419440 NPM3O75607 178 aaKnown RBP18.67■□□□□ 0.58
AP000844.2-201ENST00000419440 C1QBPQ07021 282 aaKnown RBP18.57■□□□□ 0.56
AP000844.2-201ENST00000419440 NCAPD3P42695 1498 aa18.52■□□□□ 0.55
AP000844.2-201ENST00000419440 SMARCA4P51532 1647 aa18.49■□□□□ 0.55
AP000844.2-201ENST00000419440 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.45■□□□□ 0.54
AP000844.2-201ENST00000419440 SMARCA2P51531 1590 aa18.45■□□□□ 0.54
AP000844.2-201ENST00000419440 ATAD2BQ9ULI0 1458 aa18.45■□□□□ 0.54
AP000844.2-201ENST00000419440 BAZ1AQ9NRL2 1556 aaPredicted RBP18.44■□□□□ 0.54
AP000844.2-201ENST00000419440 HMGXB3Q12766 1538 aa18.42■□□□□ 0.54
AP000844.2-201ENST00000419440 PEG3Q9GZU2 1588 aa18.38■□□□□ 0.53
AP000844.2-201ENST00000419440 KCNA4P22459 653 aa18.31■□□□□ 0.52
AP000844.2-201ENST00000419440 BAZ1BQ9UIG0 1483 aaKnown RBP18.26■□□□□ 0.51
AP000844.2-201ENST00000419440 MROH2BQ7Z745 1585 aa18.25■□□□□ 0.51
AP000844.2-201ENST00000419440 ERCC6Q03468 1493 aa18.12■□□□□ 0.49
AP000844.2-201ENST00000419440 CUX2O14529 1486 aa18.11■□□□□ 0.49
AP000844.2-201ENST00000419440 LAMC3Q9Y6N6 1575 aa18.08■□□□□ 0.49
AP000844.2-201ENST00000419440 NESP48681 1621 aa18.05■□□□□ 0.48
AP000844.2-201ENST00000419440 WIZO95785 1651 aa18.03■□□□□ 0.48
AP000844.2-201ENST00000419440 U3KPZ7 1027 aaPredicted RBP17.97■□□□□ 0.47
AP000844.2-201ENST00000419440 RSF1Q96T23 1441 aaPredicted RBP17.95■□□□□ 0.46
AP000844.2-201ENST00000419440 PDS5BQ9NTI5 1447 aa17.94■□□□□ 0.46
AP000844.2-201ENST00000419440 THOC2Q8NI27 1593 aaKnown RBP17.93■□□□□ 0.46
AP000844.2-201ENST00000419440 CADPSQ9ULU8 1353 aa17.91■□□□□ 0.46
AP000844.2-201ENST00000419440 KIF21AQ7Z4S6 1674 aa17.89■□□□□ 0.45
AP000844.2-201ENST00000419440 TOP2AP11388 1531 aaKnown RBP17.88■□□□□ 0.45
AP000844.2-201ENST00000419440 DNAJC5Q9H3Z4 198 aa17.82■□□□□ 0.44
AP000844.2-201ENST00000419440 CFTRP13569 1480 aa17.78■□□□□ 0.44
AP000844.2-201ENST00000419440 SLC4A2P04920 1241 aa17.77■□□□□ 0.44
AP000844.2-201ENST00000419440 MRC2Q9UBG0 1479 aa17.75■□□□□ 0.43
AP000844.2-201ENST00000419440 CAPN15O75808 1086 aa17.75■□□□□ 0.43
AP000844.2-201ENST00000419440 WDR62O43379 1518 aa17.74■□□□□ 0.43
AP000844.2-201ENST00000419440 CEP164Q9UPV0 1460 aa17.72■□□□□ 0.43
AP000844.2-201ENST00000419440 FANCD2Q9BXW9 1451 aa17.7■□□□□ 0.42
AP000844.2-201ENST00000419440 SPINK5Q9NQ38 1064 aaPredicted RBP17.69■□□□□ 0.42
AP000844.2-201ENST00000419440 APLP2Q06481 763 aa17.68■□□□□ 0.42
AP000844.2-201ENST00000419440 PRDM2Q13029 1718 aa17.67■□□□□ 0.42
AP000844.2-201ENST00000419440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.63■□□□□ 0.41
AP000844.2-201ENST00000419440 HNRNPUL2Q1KMD3 747 aaKnown RBP17.63■□□□□ 0.41
AP000844.2-201ENST00000419440 CCDC88BA6NC98 1476 aa17.62■□□□□ 0.41
AP000844.2-201ENST00000419440 DSG3P32926 999 aa17.58■□□□□ 0.4
AP000844.2-201ENST00000419440 URB2Q14146 1524 aaKnown RBP17.54■□□□□ 0.4
AP000844.2-201ENST00000419440 SAMD1Q6SPF0 538 aaPredicted RBP17.49■□□□□ 0.39
AP000844.2-201ENST00000419440 ZNF219Q9P2Y4 722 aaPredicted RBP17.47■□□□□ 0.39
AP000844.2-201ENST00000419440 TRHP20396 242 aaPredicted RBP17.46■□□□□ 0.39
AP000844.2-201ENST00000419440 ABCC8Q09428 1581 aa17.44■□□□□ 0.38
AP000844.2-201ENST00000419440 TOPBP1Q92547 1522 aa17.39■□□□□ 0.37
AP000844.2-201ENST00000419440 DNMBPQ6XZF7 1577 aa17.38■□□□□ 0.37
AP000844.2-201ENST00000419440 IFT140Q96RY7 1462 aa17.37■□□□□ 0.37
AP000844.2-201ENST00000419440 SLC4A1APQ9BWU0 796 aaKnown RBP17.36■□□□□ 0.37
AP000844.2-201ENST00000419440 MYCNP04198 464 aaPredicted RBP17.34■□□□□ 0.37
AP000844.2-201ENST00000419440 ABCB7O75027 752 aa17.29■□□□□ 0.36
AP000844.2-201ENST00000419440 ZNF608Q9ULD9 1512 aaPredicted RBP17.26■□□□□ 0.35
AP000844.2-201ENST00000419440 TARBP1Q13395 1621 aaKnown RBP17.25■□□□□ 0.35
AP000844.2-201ENST00000419440 EIF4G3O43432 1585 aaKnown RBP17.23■□□□□ 0.35
AP000844.2-201ENST00000419440 POLA1P09884 1462 aaPredicted RBP17.23■□□□□ 0.35
AP000844.2-201ENST00000419440 OSCARQ8IYS5 282 aa17.22■□□□□ 0.35
AP000844.2-201ENST00000419440 WDR97A6NE52 1622 aa17.19■□□□□ 0.34
AP000844.2-201ENST00000419440 FOXD4L1Q9NU39 408 aa17.15■□□□□ 0.34
AP000844.2-201ENST00000419440 CUX1P39880 1505 aa17.15■□□□□ 0.34
AP000844.2-201ENST00000419440 SUPT5HO00267 1087 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms