RNA–Protein interactions for RNA: ENST00000418527.1

NPHP1-205, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-205ENST00000418527 AEBP2Q6ZN18 517 aaPredicted RBP29.76■■■□□ 2.35
NPHP1-205ENST00000418527 CHIC1Q5VXU3 224 aa27.96■■■□□ 2.07
NPHP1-205ENST00000418527 SENP3Q9H4L4 574 aaPredicted RBP25.33■■□□□ 1.65
NPHP1-205ENST00000418527 PHF23Q9BUL5 403 aaPredicted RBP24.98■■□□□ 1.59
NPHP1-205ENST00000418527 NISCHQ9Y2I1 1504 aa24.4■■□□□ 1.5
NPHP1-205ENST00000418527 FOXD1Q16676 465 aa23.69■■□□□ 1.38
NPHP1-205ENST00000418527 MSH5O43196 834 aa22.21■■□□□ 1.15
NPHP1-205ENST00000418527 PLPPR3Q6T4P5 718 aa22.18■■□□□ 1.14
NPHP1-205ENST00000418527 POTEDQ86YR6 584 aa22.17■■□□□ 1.14
NPHP1-205ENST00000418527 PIAS4Q8N2W9 510 aaPredicted RBP22.02■■□□□ 1.12
NPHP1-205ENST00000418527 PPP6R1Q9UPN7 881 aa21.98■■□□□ 1.11
NPHP1-205ENST00000418527 ADRA2BP18089 450 aa21.84■■□□□ 1.09
NPHP1-205ENST00000418527 CCDC180Q9P1Z9 1646 aa21.41■■□□□ 1.02
NPHP1-205ENST00000418527 ZCCHC6Q5VYS8 1495 aaKnown RBP20.44■□□□□ 0.86
NPHP1-205ENST00000418527 ABCC9O60706 1549 aa20.42■□□□□ 0.86
NPHP1-205ENST00000418527 DCAF8L2P0C7V8 631 aa20.32■□□□□ 0.84
NPHP1-205ENST00000418527 DCAF1Q9Y4B6 1507 aa20.19■□□□□ 0.82
NPHP1-205ENST00000418527 MAPK8IP2Q13387 824 aaPredicted RBP20.16■□□□□ 0.82
NPHP1-205ENST00000418527 DMRT2Q9Y5R5 561 aa20.08■□□□□ 0.81
NPHP1-205ENST00000418527 MYO15BQ96JP2 1530 aa20.03■□□□□ 0.8
NPHP1-205ENST00000418527 NACADO15069 1562 aa20■□□□□ 0.79
NPHP1-205ENST00000418527 RB1CC1Q8TDY2 1594 aa19.91■□□□□ 0.78
NPHP1-205ENST00000418527 SCAF1Q9H7N4 1312 aaKnown RBP19.9■□□□□ 0.78
NPHP1-205ENST00000418527 SHROOM4Q9ULL8 1493 aa19.78■□□□□ 0.76
NPHP1-205ENST00000418527 SCRIBQ14160 1630 aa19.64■□□□□ 0.73
NPHP1-205ENST00000418527 PPP4R3CPQ6ZMV5 832 aa19.42■□□□□ 0.7
NPHP1-205ENST00000418527 UNC13AQ9UPW8 1703 aa19.39■□□□□ 0.69
NPHP1-205ENST00000418527 HOXD11P31277 338 aaPredicted RBP19.27■□□□□ 0.68
NPHP1-205ENST00000418527 PABPN1Q86U42 306 aaKnown RBP eCLIP19.2■□□□□ 0.66
NPHP1-205ENST00000418527 CACNB1Q02641 598 aaPredicted RBP19.19■□□□□ 0.66
NPHP1-205ENST00000418527 BICRAQ9NZM4 1560 aa19.18■□□□□ 0.66
NPHP1-205ENST00000418527 DCAF8L1A6NGE4 600 aa19.15■□□□□ 0.66
NPHP1-205ENST00000418527 CNKSR2Q8WXI2 1034 aa19.11■□□□□ 0.65
NPHP1-205ENST00000418527 RNF216Q9NWF9 866 aaPredicted RBP19.02■□□□□ 0.64
NPHP1-205ENST00000418527 RNF39Q9H2S5 420 aa18.98■□□□□ 0.63
NPHP1-205ENST00000418527 SUPT5HO00267 1087 aaKnown RBP18.97■□□□□ 0.63
NPHP1-205ENST00000418527 CECR2Q9BXF3 1484 aa18.92■□□□□ 0.62
NPHP1-205ENST00000418527 BAZ1AQ9NRL2 1556 aaPredicted RBP18.9■□□□□ 0.62
NPHP1-205ENST00000418527 RSF1Q96T23 1441 aaPredicted RBP18.83■□□□□ 0.61
NPHP1-205ENST00000418527 MROH2BQ7Z745 1585 aa18.81■□□□□ 0.6
NPHP1-205ENST00000418527 SMARCA4P51532 1647 aa18.8■□□□□ 0.6
NPHP1-205ENST00000418527 NCBP3Q53F19 620 aaKnown RBP18.69■□□□□ 0.58
NPHP1-205ENST00000418527 EIF4G1Q04637 1599 aaKnown RBP18.68■□□□□ 0.58
NPHP1-205ENST00000418527 DNAJC5BQ9UF47 199 aa18.66■□□□□ 0.58
NPHP1-205ENST00000418527 WIZO95785 1651 aa18.66■□□□□ 0.58
NPHP1-205ENST00000418527 C1QBPQ07021 282 aaKnown RBP18.64■□□□□ 0.57
NPHP1-205ENST00000418527 SMARCA2P51531 1590 aa18.59■□□□□ 0.57
NPHP1-205ENST00000418527 PEG3Q9GZU2 1588 aa18.56■□□□□ 0.56
NPHP1-205ENST00000418527 ATAD2BQ9ULI0 1458 aa18.54■□□□□ 0.56
NPHP1-205ENST00000418527 KCNA4P22459 653 aa18.52■□□□□ 0.56
NPHP1-205ENST00000418527 TOP2AP11388 1531 aaKnown RBP18.5■□□□□ 0.55
NPHP1-205ENST00000418527 BAZ1BQ9UIG0 1483 aaKnown RBP18.48■□□□□ 0.55
NPHP1-205ENST00000418527 CC2D2AQ9P2K1 1620 aa18.45■□□□□ 0.54
NPHP1-205ENST00000418527 NCAPD3P42695 1498 aa18.43■□□□□ 0.54
NPHP1-205ENST00000418527 HMGXB3Q12766 1538 aa18.4■□□□□ 0.54
NPHP1-205ENST00000418527 NPM3O75607 178 aaKnown RBP18.35■□□□□ 0.53
NPHP1-205ENST00000418527 CCDC88BA6NC98 1476 aa18.28■□□□□ 0.52
NPHP1-205ENST00000418527 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.24■□□□□ 0.51
NPHP1-205ENST00000418527 CADPSQ9ULU8 1353 aa17.97■□□□□ 0.47
NPHP1-205ENST00000418527 CFTRP13569 1480 aa17.95■□□□□ 0.46
NPHP1-205ENST00000418527 U3KPZ7 1027 aaPredicted RBP17.93■□□□□ 0.46
NPHP1-205ENST00000418527 TRIM41Q8WV44 630 aa17.89■□□□□ 0.45
NPHP1-205ENST00000418527 PRDM2Q13029 1718 aa17.89■□□□□ 0.45
NPHP1-205ENST00000418527 LAMC3Q9Y6N6 1575 aa17.87■□□□□ 0.45
NPHP1-205ENST00000418527 ABCC8Q09428 1581 aa17.81■□□□□ 0.44
NPHP1-205ENST00000418527 NESP48681 1621 aa17.8■□□□□ 0.44
NPHP1-205ENST00000418527 WRNQ14191 1432 aaPredicted RBP eCLIP17.79■□□□□ 0.44
NPHP1-205ENST00000418527 PDS5BQ9NTI5 1447 aa17.78■□□□□ 0.44
NPHP1-205ENST00000418527 FANCD2Q9BXW9 1451 aa17.76■□□□□ 0.43
NPHP1-205ENST00000418527 SPINK5Q9NQ38 1064 aaPredicted RBP17.74■□□□□ 0.43
NPHP1-205ENST00000418527 CEP164Q9UPV0 1460 aa17.7■□□□□ 0.42
NPHP1-205ENST00000418527 DSG3P32926 999 aa17.68■□□□□ 0.42
NPHP1-205ENST00000418527 SLC4A1APQ9BWU0 796 aaKnown RBP17.68■□□□□ 0.42
NPHP1-205ENST00000418527 SYNJ1O43426 1573 aa17.66■□□□□ 0.42
NPHP1-205ENST00000418527 CAPN15O75808 1086 aa17.64■□□□□ 0.41
NPHP1-205ENST00000418527 TOP2BQ02880 1626 aa17.64■□□□□ 0.41
NPHP1-205ENST00000418527 SLC4A2P04920 1241 aa17.63■□□□□ 0.41
NPHP1-205ENST00000418527 BIVM-ERCC5R4GMW8 1640 aa17.62■□□□□ 0.41
NPHP1-205ENST00000418527 CUX1P39880 1505 aa17.62■□□□□ 0.41
NPHP1-205ENST00000418527 KIF21AQ7Z4S6 1674 aa17.61■□□□□ 0.41
NPHP1-205ENST00000418527 ERCC6Q03468 1493 aa17.6■□□□□ 0.41
NPHP1-205ENST00000418527 DNMBPQ6XZF7 1577 aa17.57■□□□□ 0.4
NPHP1-205ENST00000418527 TOPBP1Q92547 1522 aa17.53■□□□□ 0.4
NPHP1-205ENST00000418527 MRC2Q9UBG0 1479 aa17.53■□□□□ 0.4
NPHP1-205ENST00000418527 FAM9AQ8IZU1 332 aaPredicted RBP17.51■□□□□ 0.39
NPHP1-205ENST00000418527 URB2Q14146 1524 aaKnown RBP17.51■□□□□ 0.39
NPHP1-205ENST00000418527 FGD5Q6ZNL6 1462 aa17.49■□□□□ 0.39
NPHP1-205ENST00000418527 EEA1Q15075 1411 aa17.48■□□□□ 0.39
NPHP1-205ENST00000418527 SOGA1O94964 1423 aa17.44■□□□□ 0.38
NPHP1-205ENST00000418527 POLA1P09884 1462 aaPredicted RBP17.42■□□□□ 0.38
NPHP1-205ENST00000418527 WDR62O43379 1518 aa17.4■□□□□ 0.38
NPHP1-205ENST00000418527 KIF27Q86VH2 1401 aa17.39■□□□□ 0.38
NPHP1-205ENST00000418527 CSRNP3Q8WYN3 585 aa17.38■□□□□ 0.37
NPHP1-205ENST00000418527 THOC2Q8NI27 1593 aaKnown RBP17.36■□□□□ 0.37
NPHP1-205ENST00000418527 CUX2O14529 1486 aa17.36■□□□□ 0.37
NPHP1-205ENST00000418527 RAD54L2Q9Y4B4 1467 aa17.35■□□□□ 0.37
NPHP1-205ENST00000418527 RUSC2Q8N2Y8 1516 aa17.35■□□□□ 0.37
NPHP1-205ENST00000418527 ABCA10Q8WWZ4 1543 aa17.33■□□□□ 0.37
NPHP1-205ENST00000418527 TRHP20396 242 aaPredicted RBP17.3■□□□□ 0.36
NPHP1-205ENST00000418527 POTEHQ6S545 545 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms