RNA–Protein interactions for RNA: ENST00000415374.5

PNPT1-202, Transcript of polyribonucleotide nucleotidyltransferase 1, humanhuman

TSL 5

Gene PNPT1, Length 3,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNPT1-202ENST00000415374 NISCHQ9Y2I1 1504 aa17.4■□□□□ 0.38
PNPT1-202ENST00000415374 SHROOM4Q9ULL8 1493 aa15.56■□□□□ 0.08
PNPT1-202ENST00000415374 DCAF8L2P0C7V8 631 aa15.5■□□□□ 0.07
PNPT1-202ENST00000415374 SUPT5HO00267 1087 aaKnown RBP15.22■□□□□ 0.03
PNPT1-202ENST00000415374 CCDC180Q9P1Z9 1646 aa14.78□□□□□ -0.04
PNPT1-202ENST00000415374 ZCCHC6Q5VYS8 1495 aaKnown RBP14.61□□□□□ -0.07
PNPT1-202ENST00000415374 EHMT2Q96KQ7 1210 aa14.39□□□□□ -0.11
PNPT1-202ENST00000415374 ABCC9O60706 1549 aa14.35□□□□□ -0.11
PNPT1-202ENST00000415374 CHIC1Q5VXU3 224 aa14.33□□□□□ -0.11
PNPT1-202ENST00000415374 LOC105371045A0A1W2PR82 267 aa14.21□□□□□ -0.14
PNPT1-202ENST00000415374 FAM9AQ8IZU1 332 aaPredicted RBP14.21□□□□□ -0.14
PNPT1-202ENST00000415374 MYO15BQ96JP2 1530 aa14.18□□□□□ -0.14
PNPT1-202ENST00000415374 SCRIBQ14160 1630 aa14.15□□□□□ -0.14
PNPT1-202ENST00000415374 PCGF6Q9BYE7 350 aa14.08□□□□□ -0.16
PNPT1-202ENST00000415374 DCAF1Q9Y4B6 1507 aa13.98□□□□□ -0.17
PNPT1-202ENST00000415374 TRIM41Q8WV44 630 aa13.96□□□□□ -0.17
PNPT1-202ENST00000415374 PABPN1Q86U42 306 aaKnown RBP eCLIP13.94□□□□□ -0.18
PNPT1-202ENST00000415374 PPARGC1BQ86YN6 1023 aaKnown RBP13.87□□□□□ -0.19
PNPT1-202ENST00000415374 RSF1Q96T23 1441 aaPredicted RBP13.86□□□□□ -0.19
PNPT1-202ENST00000415374 CECR2Q9BXF3 1484 aa13.85□□□□□ -0.19
PNPT1-202ENST00000415374 TTBK1Q5TCY1 1321 aaPredicted RBP13.83□□□□□ -0.2
PNPT1-202ENST00000415374 NACADO15069 1562 aa13.75□□□□□ -0.21
PNPT1-202ENST00000415374 RB1CC1Q8TDY2 1594 aa13.72□□□□□ -0.21
PNPT1-202ENST00000415374 MROH2BQ7Z745 1585 aa13.67□□□□□ -0.22
PNPT1-202ENST00000415374 HRCP23327 699 aa13.63□□□□□ -0.23
PNPT1-202ENST00000415374 RANGAP1P46060 587 aaPredicted RBP13.62□□□□□ -0.23
PNPT1-202ENST00000415374 WIZO95785 1651 aa13.57□□□□□ -0.24
PNPT1-202ENST00000415374 TRIM26Q12899 539 aaPredicted RBP13.5□□□□□ -0.25
PNPT1-202ENST00000415374 UBTFP17480 764 aaKnown RBP13.45□□□□□ -0.26
PNPT1-202ENST00000415374 ABCC8Q09428 1581 aa13.39□□□□□ -0.27
PNPT1-202ENST00000415374 UNC13AQ9UPW8 1703 aa13.36□□□□□ -0.27
PNPT1-202ENST00000415374 BAZ1AQ9NRL2 1556 aaPredicted RBP13.34□□□□□ -0.27
PNPT1-202ENST00000415374 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.33□□□□□ -0.28
PNPT1-202ENST00000415374 CCDC88BA6NC98 1476 aa13.32□□□□□ -0.28
PNPT1-202ENST00000415374 SOGA1O94964 1423 aa13.28□□□□□ -0.28
PNPT1-202ENST00000415374 SMARCA4P51532 1647 aa13.24□□□□□ -0.29
PNPT1-202ENST00000415374 CCER1Q8TC90 406 aaPredicted RBP13.23□□□□□ -0.29
PNPT1-202ENST00000415374 RUSC2Q8N2Y8 1516 aa13.23□□□□□ -0.29
PNPT1-202ENST00000415374 CSRNP3Q8WYN3 585 aa13.21□□□□□ -0.29
PNPT1-202ENST00000415374 BICRAQ9NZM4 1560 aa13.21□□□□□ -0.3
PNPT1-202ENST00000415374 TOP2AP11388 1531 aaKnown RBP13.17□□□□□ -0.3
PNPT1-202ENST00000415374 HNRNPUL2Q1KMD3 747 aaKnown RBP13.15□□□□□ -0.3
PNPT1-202ENST00000415374 SMARCA2P51531 1590 aa13.15□□□□□ -0.3
PNPT1-202ENST00000415374 BAZ1BQ9UIG0 1483 aaKnown RBP13.11□□□□□ -0.31
PNPT1-202ENST00000415374 WRNQ14191 1432 aaPredicted RBP eCLIP13.1□□□□□ -0.31
PNPT1-202ENST00000415374 CEP162Q5TB80 1403 aa13.08□□□□□ -0.32
PNPT1-202ENST00000415374 APLP2Q06481 763 aa13.06□□□□□ -0.32
PNPT1-202ENST00000415374 ATAD2BQ9ULI0 1458 aa13.06□□□□□ -0.32
PNPT1-202ENST00000415374 ATP1B4Q9UN42 357 aaPredicted RBP13.03□□□□□ -0.32
PNPT1-202ENST00000415374 ITGAEP38570 1179 aa13.01□□□□□ -0.33
PNPT1-202ENST00000415374 ZEB1P37275 1124 aaPredicted RBP12.99□□□□□ -0.33
PNPT1-202ENST00000415374 EIF4G1Q04637 1599 aaKnown RBP12.97□□□□□ -0.33
PNPT1-202ENST00000415374 P3H3Q8IVL6 736 aa12.95□□□□□ -0.34
PNPT1-202ENST00000415374 SYNJ1O43426 1573 aa12.93□□□□□ -0.34
PNPT1-202ENST00000415374 TNIKQ9UKE5 1360 aa12.92□□□□□ -0.34
PNPT1-202ENST00000415374 GOLGA3Q08378 1498 aa12.9□□□□□ -0.34
PNPT1-202ENST00000415374 CLIP1P30622 1438 aa12.9□□□□□ -0.34
PNPT1-202ENST00000415374 RAPGEF2Q9Y4G8 1499 aa12.89□□□□□ -0.35
PNPT1-202ENST00000415374 DNAJC5BQ9UF47 199 aa12.85□□□□□ -0.35
PNPT1-202ENST00000415374 PEG3Q9GZU2 1588 aa12.85□□□□□ -0.35
PNPT1-202ENST00000415374 YTHDC1Q96MU7 727 aaKnown RBP12.84□□□□□ -0.35
PNPT1-202ENST00000415374 CEP164Q9UPV0 1460 aa12.81□□□□□ -0.36
PNPT1-202ENST00000415374 EEA1Q15075 1411 aa12.8□□□□□ -0.36
PNPT1-202ENST00000415374 KANK4Q5T7N3 995 aaPredicted RBP12.8□□□□□ -0.36
PNPT1-202ENST00000415374 ARID3CA6NKF2 412 aa12.77□□□□□ -0.37
PNPT1-202ENST00000415374 DIEXFQ68CQ4 756 aaKnown RBP12.77□□□□□ -0.37
PNPT1-202ENST00000415374 CUX2O14529 1486 aa12.71□□□□□ -0.37
PNPT1-202ENST00000415374 NCAPD3P42695 1498 aa12.7□□□□□ -0.38
PNPT1-202ENST00000415374 FAM50AQ14320 339 aaKnown RBP12.7□□□□□ -0.38
PNPT1-202ENST00000415374 KIF27Q86VH2 1401 aa12.69□□□□□ -0.38
PNPT1-202ENST00000415374 CUX1P39880 1505 aa12.69□□□□□ -0.38
PNPT1-202ENST00000415374 VPS8Q8N3P4 1428 aa12.68□□□□□ -0.38
PNPT1-202ENST00000415374 HMGXB3Q12766 1538 aa12.68□□□□□ -0.38
PNPT1-202ENST00000415374 NESP48681 1621 aa12.67□□□□□ -0.38
PNPT1-202ENST00000415374 CADPSQ9ULU8 1353 aa12.64□□□□□ -0.39
PNPT1-202ENST00000415374 CC2D2AQ9P2K1 1620 aa12.63□□□□□ -0.39
PNPT1-202ENST00000415374 KIF21BO75037 1637 aa12.62□□□□□ -0.39
PNPT1-202ENST00000415374 TOP2BQ02880 1626 aa12.62□□□□□ -0.39
PNPT1-202ENST00000415374 CFTRP13569 1480 aa12.61□□□□□ -0.39
PNPT1-202ENST00000415374 RAD54L2Q9Y4B4 1467 aa12.61□□□□□ -0.39
PNPT1-202ENST00000415374 SCAF1Q9H7N4 1312 aaKnown RBP12.6□□□□□ -0.39
PNPT1-202ENST00000415374 NEUROD1Q13562 356 aa12.6□□□□□ -0.39
PNPT1-202ENST00000415374 TDRD9Q8NDG6 1382 aaKnown RBP12.6□□□□□ -0.39
PNPT1-202ENST00000415374 ARAP1Q96P48 1450 aa12.6□□□□□ -0.39
PNPT1-202ENST00000415374 CARMIL1Q5VZK9 1371 aa12.59□□□□□ -0.39
PNPT1-202ENST00000415374 ZNF316A6NFI3 1004 aaPredicted RBP12.59□□□□□ -0.39
PNPT1-202ENST00000415374 FGD5Q6ZNL6 1462 aa12.58□□□□□ -0.4
PNPT1-202ENST00000415374 IGF1RP08069 1367 aa12.57□□□□□ -0.4
PNPT1-202ENST00000415374 PRXQ9BXM0 1461 aa12.55□□□□□ -0.4
PNPT1-202ENST00000415374 FANCD2Q9BXW9 1451 aa12.55□□□□□ -0.4
PNPT1-202ENST00000415374 MIER1Q8N108 512 aa12.54□□□□□ -0.4
PNPT1-202ENST00000415374 HIRIP3Q9BW71 556 aaPredicted RBP12.54□□□□□ -0.4
PNPT1-202ENST00000415374 FBLN2P98095 1184 aa12.52□□□□□ -0.41
PNPT1-202ENST00000415374 FHOD3Q2V2M9 1422 aa12.51□□□□□ -0.41
PNPT1-202ENST00000415374 GTF3C3Q9Y5Q9 886 aa12.49□□□□□ -0.41
PNPT1-202ENST00000415374 ARHGAP35Q9NRY4 1499 aa12.49□□□□□ -0.41
PNPT1-202ENST00000415374 SIN3AQ96ST3 1273 aa12.48□□□□□ -0.41
PNPT1-202ENST00000415374 CHIC2Q9UKJ5 165 aa12.46□□□□□ -0.41
PNPT1-202ENST00000415374 CENPBP07199 599 aaPredicted RBP12.45□□□□□ -0.42
PNPT1-202ENST00000415374 BIVM-ERCC5R4GMW8 1640 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms