RNA–Protein interactions for RNA: ENST00000413360.5

RUBCN-203, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

TSL 5

Gene RUBCN, Length 3,801 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-203ENST00000413360 NISCHQ9Y2I1 1504 aa18.55■□□□□ 0.56
RUBCN-203ENST00000413360 DCAF8L2P0C7V8 631 aa16.68■□□□□ 0.26
RUBCN-203ENST00000413360 AEBP2Q6ZN18 517 aaPredicted RBP16.29■□□□□ 0.2
RUBCN-203ENST00000413360 SHROOM4Q9ULL8 1493 aa16.22■□□□□ 0.19
RUBCN-203ENST00000413360 SUPT5HO00267 1087 aaKnown RBP15.88■□□□□ 0.13
RUBCN-203ENST00000413360 CCDC180Q9P1Z9 1646 aa15.65■□□□□ 0.1
RUBCN-203ENST00000413360 CHIC1Q5VXU3 224 aa15.65■□□□□ 0.1
RUBCN-203ENST00000413360 ABCC9O60706 1549 aa15.6■□□□□ 0.09
RUBCN-203ENST00000413360 ZCCHC6Q5VYS8 1495 aaKnown RBP15.5■□□□□ 0.07
RUBCN-203ENST00000413360 PABPN1Q86U42 306 aaKnown RBP eCLIP15.08■□□□□ 0
RUBCN-203ENST00000413360 SCRIBQ14160 1630 aa15.04■□□□□ -0
RUBCN-203ENST00000413360 DCAF1Q9Y4B6 1507 aa14.97□□□□□ -0.01
RUBCN-203ENST00000413360 HRCP23327 699 aa14.93□□□□□ -0.02
RUBCN-203ENST00000413360 PCGF6Q9BYE7 350 aa14.93□□□□□ -0.02
RUBCN-203ENST00000413360 EHMT2Q96KQ7 1210 aa14.87□□□□□ -0.03
RUBCN-203ENST00000413360 NACADO15069 1562 aa14.85□□□□□ -0.03
RUBCN-203ENST00000413360 RB1CC1Q8TDY2 1594 aa14.8□□□□□ -0.04
RUBCN-203ENST00000413360 FAM9AQ8IZU1 332 aaPredicted RBP14.8□□□□□ -0.04
RUBCN-203ENST00000413360 PPARGC1BQ86YN6 1023 aaKnown RBP14.76□□□□□ -0.05
RUBCN-203ENST00000413360 TRIM41Q8WV44 630 aa14.74□□□□□ -0.05
RUBCN-203ENST00000413360 MYO15BQ96JP2 1530 aa14.67□□□□□ -0.06
RUBCN-203ENST00000413360 RSF1Q96T23 1441 aaPredicted RBP14.63□□□□□ -0.07
RUBCN-203ENST00000413360 CECR2Q9BXF3 1484 aa14.63□□□□□ -0.07
RUBCN-203ENST00000413360 LOC105371045A0A1W2PR82 267 aa14.53□□□□□ -0.08
RUBCN-203ENST00000413360 MROH2BQ7Z745 1585 aa14.44□□□□□ -0.1
RUBCN-203ENST00000413360 TRIM26Q12899 539 aaPredicted RBP14.34□□□□□ -0.11
RUBCN-203ENST00000413360 BAZ1AQ9NRL2 1556 aaPredicted RBP14.34□□□□□ -0.11
RUBCN-203ENST00000413360 RANGAP1P46060 587 aaPredicted RBP14.31□□□□□ -0.12
RUBCN-203ENST00000413360 UBTFP17480 764 aaKnown RBP14.26□□□□□ -0.13
RUBCN-203ENST00000413360 WIZO95785 1651 aa14.26□□□□□ -0.13
RUBCN-203ENST00000413360 PELP1Q8IZL8 1130 aaKnown RBP14.24□□□□□ -0.13
RUBCN-203ENST00000413360 TTBK1Q5TCY1 1321 aaPredicted RBP14.24□□□□□ -0.13
RUBCN-203ENST00000413360 ZEB1P37275 1124 aaPredicted RBP14.21□□□□□ -0.14
RUBCN-203ENST00000413360 BAZ1BQ9UIG0 1483 aaKnown RBP14.16□□□□□ -0.14
RUBCN-203ENST00000413360 SMARCA4P51532 1647 aa14.13□□□□□ -0.15
RUBCN-203ENST00000413360 CCDC88BA6NC98 1476 aa14.12□□□□□ -0.15
RUBCN-203ENST00000413360 BICRAQ9NZM4 1560 aa14.1□□□□□ -0.15
RUBCN-203ENST00000413360 ATAD2BQ9ULI0 1458 aa14.06□□□□□ -0.16
RUBCN-203ENST00000413360 SCAF1Q9H7N4 1312 aaKnown RBP14.04□□□□□ -0.16
RUBCN-203ENST00000413360 TOP2AP11388 1531 aaKnown RBP14.04□□□□□ -0.16
RUBCN-203ENST00000413360 UNC13AQ9UPW8 1703 aa14.02□□□□□ -0.16
RUBCN-203ENST00000413360 PHF23Q9BUL5 403 aaPredicted RBP14.02□□□□□ -0.17
RUBCN-203ENST00000413360 CSRNP3Q8WYN3 585 aa14.01□□□□□ -0.17
RUBCN-203ENST00000413360 APLP2Q06481 763 aa14.01□□□□□ -0.17
RUBCN-203ENST00000413360 SMARCA2P51531 1590 aa13.98□□□□□ -0.17
RUBCN-203ENST00000413360 ABCC8Q09428 1581 aa13.96□□□□□ -0.18
RUBCN-203ENST00000413360 WRNQ14191 1432 aaPredicted RBP eCLIP13.94□□□□□ -0.18
RUBCN-203ENST00000413360 CCER1Q8TC90 406 aaPredicted RBP13.93□□□□□ -0.18
RUBCN-203ENST00000413360 ATP1B4Q9UN42 357 aaPredicted RBP13.91□□□□□ -0.18
RUBCN-203ENST00000413360 EIF4G1Q04637 1599 aaKnown RBP13.9□□□□□ -0.18
RUBCN-203ENST00000413360 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.88□□□□□ -0.19
RUBCN-203ENST00000413360 SOGA1O94964 1423 aa13.86□□□□□ -0.19
RUBCN-203ENST00000413360 CENPBP07199 599 aaPredicted RBP13.84□□□□□ -0.19
RUBCN-203ENST00000413360 NCAPD3P42695 1498 aa13.82□□□□□ -0.2
RUBCN-203ENST00000413360 ACIN1Q9UKV3 1341 aaKnown RBP13.8□□□□□ -0.2
RUBCN-203ENST00000413360 GTF3C3Q9Y5Q9 886 aa13.78□□□□□ -0.2
RUBCN-203ENST00000413360 NEUROD1Q13562 356 aa13.78□□□□□ -0.2
RUBCN-203ENST00000413360 DIEXFQ68CQ4 756 aaKnown RBP13.75□□□□□ -0.21
RUBCN-203ENST00000413360 DNAJC5BQ9UF47 199 aa13.75□□□□□ -0.21
RUBCN-203ENST00000413360 CADPSQ9ULU8 1353 aa13.74□□□□□ -0.21
RUBCN-203ENST00000413360 YTHDC1Q96MU7 727 aaKnown RBP13.73□□□□□ -0.21
RUBCN-203ENST00000413360 RUSC2Q8N2Y8 1516 aa13.72□□□□□ -0.21
RUBCN-203ENST00000413360 P3H3Q8IVL6 736 aa13.71□□□□□ -0.22
RUBCN-203ENST00000413360 CC2D2AQ9P2K1 1620 aa13.68□□□□□ -0.22
RUBCN-203ENST00000413360 EEA1Q15075 1411 aa13.68□□□□□ -0.22
RUBCN-203ENST00000413360 PEG3Q9GZU2 1588 aa13.66□□□□□ -0.22
RUBCN-203ENST00000413360 HNRNPUL2Q1KMD3 747 aaKnown RBP13.65□□□□□ -0.22
RUBCN-203ENST00000413360 MYT1Q01538 1121 aa13.65□□□□□ -0.22
RUBCN-203ENST00000413360 FBLN2P98095 1184 aa13.64□□□□□ -0.23
RUBCN-203ENST00000413360 CEP162Q5TB80 1403 aa13.63□□□□□ -0.23
RUBCN-203ENST00000413360 KIF27Q86VH2 1401 aa13.62□□□□□ -0.23
RUBCN-203ENST00000413360 HMGXB3Q12766 1538 aa13.62□□□□□ -0.23
RUBCN-203ENST00000413360 GOLGA3Q08378 1498 aa13.61□□□□□ -0.23
RUBCN-203ENST00000413360 ITGAEP38570 1179 aa13.61□□□□□ -0.23
RUBCN-203ENST00000413360 TNIKQ9UKE5 1360 aa13.6□□□□□ -0.23
RUBCN-203ENST00000413360 CUX2O14529 1486 aa13.59□□□□□ -0.23
RUBCN-203ENST00000413360 CLIP1P30622 1438 aa13.58□□□□□ -0.24
RUBCN-203ENST00000413360 CFTRP13569 1480 aa13.58□□□□□ -0.24
RUBCN-203ENST00000413360 NESP48681 1621 aa13.57□□□□□ -0.24
RUBCN-203ENST00000413360 CEP164Q9UPV0 1460 aa13.57□□□□□ -0.24
RUBCN-203ENST00000413360 FANCD2Q9BXW9 1451 aa13.56□□□□□ -0.24
RUBCN-203ENST00000413360 SYNJ1O43426 1573 aa13.55□□□□□ -0.24
RUBCN-203ENST00000413360 PDS5BQ9NTI5 1447 aa13.53□□□□□ -0.24
RUBCN-203ENST00000413360 TDRD9Q8NDG6 1382 aaKnown RBP13.52□□□□□ -0.24
RUBCN-203ENST00000413360 ARID3CA6NKF2 412 aa13.51□□□□□ -0.25
RUBCN-203ENST00000413360 CARMIL1Q5VZK9 1371 aa13.49□□□□□ -0.25
RUBCN-203ENST00000413360 RAPGEF2Q9Y4G8 1499 aa13.49□□□□□ -0.25
RUBCN-203ENST00000413360 ERCC6Q03468 1493 aa13.48□□□□□ -0.25
RUBCN-203ENST00000413360 ZNF316A6NFI3 1004 aaPredicted RBP13.47□□□□□ -0.25
RUBCN-203ENST00000413360 FGD5Q6ZNL6 1462 aa13.44□□□□□ -0.26
RUBCN-203ENST00000413360 CUX1P39880 1505 aa13.44□□□□□ -0.26
RUBCN-203ENST00000413360 RAD54L2Q9Y4B4 1467 aa13.44□□□□□ -0.26
RUBCN-203ENST00000413360 FAM50AQ14320 339 aaKnown RBP13.43□□□□□ -0.26
RUBCN-203ENST00000413360 SENP3Q9H4L4 574 aaPredicted RBP13.42□□□□□ -0.26
RUBCN-203ENST00000413360 CHMP7Q8WUX9 453 aaPredicted RBP13.4□□□□□ -0.26
RUBCN-203ENST00000413360 IGF1RP08069 1367 aa13.4□□□□□ -0.26
RUBCN-203ENST00000413360 TOP2BQ02880 1626 aa13.38□□□□□ -0.27
RUBCN-203ENST00000413360 MIER1Q8N108 512 aa13.36□□□□□ -0.27
RUBCN-203ENST00000413360 TOPBP1Q92547 1522 aa13.31□□□□□ -0.28
RUBCN-203ENST00000413360 KANK4Q5T7N3 995 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms