RNA–Protein interactions for RNA: ENST00000408005.2

THSD7A-201, Transcript of thrombospondin type 1 domain containing 7A, humanhuman

TSL 1 (best)

Gene THSD7A, Length 1,684 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD7A-201ENST00000408005 AEBP2Q6ZN18 517 aaPredicted RBP25.09■■□□□ 1.61
THSD7A-201ENST00000408005 CHIC1Q5VXU3 224 aa23.57■■□□□ 1.36
THSD7A-201ENST00000408005 SENP3Q9H4L4 574 aaPredicted RBP21.71■■□□□ 1.07
THSD7A-201ENST00000408005 PHF23Q9BUL5 403 aaPredicted RBP21.24■□□□□ 0.99
THSD7A-201ENST00000408005 POTEDQ86YR6 584 aa21.18■□□□□ 0.98
THSD7A-201ENST00000408005 FOXD1Q16676 465 aa20.33■□□□□ 0.85
THSD7A-201ENST00000408005 MSH5O43196 834 aa19.58■□□□□ 0.72
THSD7A-201ENST00000408005 NISCHQ9Y2I1 1504 aa19.09■□□□□ 0.65
THSD7A-201ENST00000408005 PIAS4Q8N2W9 510 aaPredicted RBP18.76■□□□□ 0.59
THSD7A-201ENST00000408005 ABCC9O60706 1549 aa18.16■□□□□ 0.5
THSD7A-201ENST00000408005 PPP6R1Q9UPN7 881 aa18.03■□□□□ 0.48
THSD7A-201ENST00000408005 ADRA2BP18089 450 aa17.95■□□□□ 0.46
THSD7A-201ENST00000408005 DNAJC5BQ9UF47 199 aa17.66■□□□□ 0.42
THSD7A-201ENST00000408005 CACNB1Q02641 598 aaPredicted RBP17.63■□□□□ 0.41
THSD7A-201ENST00000408005 PLPPR3Q6T4P5 718 aa17.61■□□□□ 0.41
THSD7A-201ENST00000408005 CCDC180Q9P1Z9 1646 aa17.55■□□□□ 0.4
THSD7A-201ENST00000408005 RB1CC1Q8TDY2 1594 aa16.99■□□□□ 0.31
THSD7A-201ENST00000408005 DMRT2Q9Y5R5 561 aa16.98■□□□□ 0.31
THSD7A-201ENST00000408005 MAPK8IP2Q13387 824 aaPredicted RBP16.87■□□□□ 0.29
THSD7A-201ENST00000408005 UNC13AQ9UPW8 1703 aa16.79■□□□□ 0.28
THSD7A-201ENST00000408005 DNAJC5Q9H3Z4 198 aa16.72■□□□□ 0.27
THSD7A-201ENST00000408005 PABPN1Q86U42 306 aaKnown RBP eCLIP16.71■□□□□ 0.27
THSD7A-201ENST00000408005 NACADO15069 1562 aa16.68■□□□□ 0.26
THSD7A-201ENST00000408005 BICRAQ9NZM4 1560 aa16.59■□□□□ 0.25
THSD7A-201ENST00000408005 SCAF1Q9H7N4 1312 aaKnown RBP16.55■□□□□ 0.24
THSD7A-201ENST00000408005 DCAF8L1A6NGE4 600 aa16.53■□□□□ 0.24
THSD7A-201ENST00000408005 RNF39Q9H2S5 420 aa16.51■□□□□ 0.23
THSD7A-201ENST00000408005 CC2D2AQ9P2K1 1620 aa16.43■□□□□ 0.22
THSD7A-201ENST00000408005 CECR2Q9BXF3 1484 aa16.43■□□□□ 0.22
THSD7A-201ENST00000408005 POTEHQ6S545 545 aa16.37■□□□□ 0.21
THSD7A-201ENST00000408005 C1QBPQ07021 282 aaKnown RBP16.27■□□□□ 0.19
THSD7A-201ENST00000408005 DCAF8L2P0C7V8 631 aa16.24■□□□□ 0.19
THSD7A-201ENST00000408005 SHROOM4Q9ULL8 1493 aa16.22■□□□□ 0.19
THSD7A-201ENST00000408005 EIF4G1Q04637 1599 aaKnown RBP16.21■□□□□ 0.18
THSD7A-201ENST00000408005 MYO15BQ96JP2 1530 aa16.2■□□□□ 0.18
THSD7A-201ENST00000408005 EHMT2Q96KQ7 1210 aa16.06■□□□□ 0.16
THSD7A-201ENST00000408005 CUX2O14529 1486 aa15.96■□□□□ 0.15
THSD7A-201ENST00000408005 SCRIBQ14160 1630 aa15.91■□□□□ 0.14
THSD7A-201ENST00000408005 HOXD11P31277 338 aaPredicted RBP15.84■□□□□ 0.13
THSD7A-201ENST00000408005 DCAF1Q9Y4B6 1507 aa15.73■□□□□ 0.11
THSD7A-201ENST00000408005 ERCC6Q03468 1493 aa15.7■□□□□ 0.1
THSD7A-201ENST00000408005 ZCCHC6Q5VYS8 1495 aaKnown RBP15.69■□□□□ 0.1
THSD7A-201ENST00000408005 TRIM41Q8WV44 630 aa15.66■□□□□ 0.1
THSD7A-201ENST00000408005 KCNA4P22459 653 aa15.57■□□□□ 0.08
THSD7A-201ENST00000408005 THOC2Q8NI27 1593 aaKnown RBP15.5■□□□□ 0.07
THSD7A-201ENST00000408005 RNF216Q9NWF9 866 aaPredicted RBP15.43■□□□□ 0.06
THSD7A-201ENST00000408005 NESP48681 1621 aa15.43■□□□□ 0.06
THSD7A-201ENST00000408005 SLC24A1O60721 1099 aa15.38■□□□□ 0.05
THSD7A-201ENST00000408005 NCAPD3P42695 1498 aa15.37■□□□□ 0.05
THSD7A-201ENST00000408005 KIF21AQ7Z4S6 1674 aa15.3■□□□□ 0.04
THSD7A-201ENST00000408005 SMARCA2P51531 1590 aa15.29■□□□□ 0.04
THSD7A-201ENST00000408005 CSRNP3Q8WYN3 585 aa15.28■□□□□ 0.04
THSD7A-201ENST00000408005 PPP4R3CPQ6ZMV5 832 aa15.28■□□□□ 0.04
THSD7A-201ENST00000408005 CNKSR2Q8WXI2 1034 aa15.28■□□□□ 0.04
THSD7A-201ENST00000408005 HMGXB3Q12766 1538 aa15.26■□□□□ 0.03
THSD7A-201ENST00000408005 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.25■□□□□ 0.03
THSD7A-201ENST00000408005 ATAD2BQ9ULI0 1458 aa15.24■□□□□ 0.03
THSD7A-201ENST00000408005 BAZ1AQ9NRL2 1556 aaPredicted RBP15.22■□□□□ 0.03
THSD7A-201ENST00000408005 LAMC3Q9Y6N6 1575 aa15.2■□□□□ 0.02
THSD7A-201ENST00000408005 SMARCA4P51532 1647 aa15.11■□□□□ 0.01
THSD7A-201ENST00000408005 RIMBP3CA6NJZ7 1639 aa15.07■□□□□ 0
THSD7A-201ENST00000408005 RIMBP3BA6NNM3 1639 aa15.07■□□□□ 0
THSD7A-201ENST00000408005 RIMBP3Q9UFD9 1639 aa15.07■□□□□ 0
THSD7A-201ENST00000408005 DSG3P32926 999 aa15.06■□□□□ 0
THSD7A-201ENST00000408005 WDR62O43379 1518 aa15.06■□□□□ 0
THSD7A-201ENST00000408005 BAZ1BQ9UIG0 1483 aaKnown RBP15.04■□□□□ -0
THSD7A-201ENST00000408005 PDS5BQ9NTI5 1447 aa15.04■□□□□ -0
THSD7A-201ENST00000408005 SLC4A1APQ9BWU0 796 aaKnown RBP15.03■□□□□ -0
THSD7A-201ENST00000408005 MRC2Q9UBG0 1479 aa15.02■□□□□ -0
THSD7A-201ENST00000408005 OSCARQ8IYS5 282 aa14.98□□□□□ -0.01
THSD7A-201ENST00000408005 CAPN15O75808 1086 aa14.97□□□□□ -0.01
THSD7A-201ENST00000408005 PEG3Q9GZU2 1588 aa14.96□□□□□ -0.02
THSD7A-201ENST00000408005 ARHGEF11O15085 1522 aa14.9□□□□□ -0.02
THSD7A-201ENST00000408005 CADPSQ9ULU8 1353 aa14.83□□□□□ -0.04
THSD7A-201ENST00000408005 SPINK5Q9NQ38 1064 aaPredicted RBP14.83□□□□□ -0.04
THSD7A-201ENST00000408005 CEP164Q9UPV0 1460 aa14.8□□□□□ -0.04
THSD7A-201ENST00000408005 SP7Q8TDD2 431 aaPredicted RBP14.77□□□□□ -0.05
THSD7A-201ENST00000408005 TRHP20396 242 aaPredicted RBP14.75□□□□□ -0.05
THSD7A-201ENST00000408005 RTN4Q9NQC3 1192 aaKnown RBP14.74□□□□□ -0.05
THSD7A-201ENST00000408005 MROH2BQ7Z745 1585 aa14.72□□□□□ -0.05
THSD7A-201ENST00000408005 FANCD2Q9BXW9 1451 aa14.72□□□□□ -0.05
THSD7A-201ENST00000408005 ARAP1Q96P48 1450 aa14.71□□□□□ -0.05
THSD7A-201ENST00000408005 AMER1Q5JTC6 1135 aaPredicted RBP14.71□□□□□ -0.06
THSD7A-201ENST00000408005 CYB5RLQ6IPT4 315 aa14.7□□□□□ -0.06
THSD7A-201ENST00000408005 URB2Q14146 1524 aaKnown RBP14.69□□□□□ -0.06
THSD7A-201ENST00000408005 U3KPZ7 1027 aaPredicted RBP14.65□□□□□ -0.06
THSD7A-201ENST00000408005 CHD1O14646 1710 aa14.65□□□□□ -0.07
THSD7A-201ENST00000408005 CHRDL2Q6WN34 429 aa14.62□□□□□ -0.07
THSD7A-201ENST00000408005 ZNF608Q9ULD9 1512 aaPredicted RBP14.61□□□□□ -0.07
THSD7A-201ENST00000408005 EIF4G3O43432 1585 aaKnown RBP14.56□□□□□ -0.08
THSD7A-201ENST00000408005 WIZO95785 1651 aa14.55□□□□□ -0.08
THSD7A-201ENST00000408005 CFTRP13569 1480 aa14.55□□□□□ -0.08
THSD7A-201ENST00000408005 PRDM2Q13029 1718 aa14.54□□□□□ -0.08
THSD7A-201ENST00000408005 RSF1Q96T23 1441 aaPredicted RBP14.52□□□□□ -0.08
THSD7A-201ENST00000408005 IFT140Q96RY7 1462 aa14.52□□□□□ -0.09
THSD7A-201ENST00000408005 RBM42Q9BTD8 480 aaKnown RBP14.49□□□□□ -0.09
THSD7A-201ENST00000408005 ABCB7O75027 752 aa14.48□□□□□ -0.09
THSD7A-201ENST00000408005 NCBP3Q53F19 620 aaKnown RBP14.42□□□□□ -0.1
THSD7A-201ENST00000408005 ILDR1Q86SU0 546 aaPredicted RBP14.42□□□□□ -0.1
THSD7A-201ENST00000408005 CLASP1Q7Z460 1538 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms