RNA–Protein interactions for RNA: ENST00000399206.4

LINC01588-201, Transcript of long intergenic non-protein coding RNA 1588, humanhuman

TSL 2

Gene LINC01588, Length 2,686 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01588-201ENST00000399206 NISCHQ9Y2I1 1504 aa21.34■■□□□ 1.01
LINC01588-201ENST00000399206 SHROOM4Q9ULL8 1493 aa18.2■□□□□ 0.5
LINC01588-201ENST00000399206 CCDC180Q9P1Z9 1646 aa18.17■□□□□ 0.5
LINC01588-201ENST00000399206 ZCCHC6Q5VYS8 1495 aaKnown RBP18.06■□□□□ 0.48
LINC01588-201ENST00000399206 SUPT5HO00267 1087 aaKnown RBP17.88■□□□□ 0.45
LINC01588-201ENST00000399206 CHIC1Q5VXU3 224 aa17.78■□□□□ 0.44
LINC01588-201ENST00000399206 AEBP2Q6ZN18 517 aaPredicted RBP17.68■□□□□ 0.42
LINC01588-201ENST00000399206 DCAF8L2P0C7V8 631 aa17.64■□□□□ 0.41
LINC01588-201ENST00000399206 DCAF1Q9Y4B6 1507 aa17.53■□□□□ 0.4
LINC01588-201ENST00000399206 MYO15BQ96JP2 1530 aa17.38■□□□□ 0.37
LINC01588-201ENST00000399206 ABCC9O60706 1549 aa17.07■□□□□ 0.32
LINC01588-201ENST00000399206 SCRIBQ14160 1630 aa17■□□□□ 0.31
LINC01588-201ENST00000399206 HRCP23327 699 aa17■□□□□ 0.31
LINC01588-201ENST00000399206 PCGF6Q9BYE7 350 aa16.94■□□□□ 0.3
LINC01588-201ENST00000399206 LOC105371045A0A1W2PR82 267 aa16.9■□□□□ 0.3
LINC01588-201ENST00000399206 RSF1Q96T23 1441 aaPredicted RBP16.89■□□□□ 0.29
LINC01588-201ENST00000399206 NACADO15069 1562 aa16.76■□□□□ 0.27
LINC01588-201ENST00000399206 RB1CC1Q8TDY2 1594 aa16.75■□□□□ 0.27
LINC01588-201ENST00000399206 TRIM41Q8WV44 630 aa16.67■□□□□ 0.26
LINC01588-201ENST00000399206 TRIM26Q12899 539 aaPredicted RBP16.63■□□□□ 0.25
LINC01588-201ENST00000399206 CECR2Q9BXF3 1484 aa16.62■□□□□ 0.25
LINC01588-201ENST00000399206 PPARGC1BQ86YN6 1023 aaKnown RBP16.61■□□□□ 0.25
LINC01588-201ENST00000399206 MROH2BQ7Z745 1585 aa16.59■□□□□ 0.25
LINC01588-201ENST00000399206 WIZO95785 1651 aa16.54■□□□□ 0.24
LINC01588-201ENST00000399206 FAM9AQ8IZU1 332 aaPredicted RBP16.52■□□□□ 0.23
LINC01588-201ENST00000399206 BAZ1AQ9NRL2 1556 aaPredicted RBP16.44■□□□□ 0.22
LINC01588-201ENST00000399206 EHMT2Q96KQ7 1210 aa16.36■□□□□ 0.21
LINC01588-201ENST00000399206 EIF4G1Q04637 1599 aaKnown RBP16.33■□□□□ 0.21
LINC01588-201ENST00000399206 ZEB1P37275 1124 aaPredicted RBP16.31■□□□□ 0.2
LINC01588-201ENST00000399206 UNC13AQ9UPW8 1703 aa16.29■□□□□ 0.2
LINC01588-201ENST00000399206 SMARCA4P51532 1647 aa16.26■□□□□ 0.19
LINC01588-201ENST00000399206 TOP2AP11388 1531 aaKnown RBP16.26■□□□□ 0.19
LINC01588-201ENST00000399206 CCDC88BA6NC98 1476 aa16.18■□□□□ 0.18
LINC01588-201ENST00000399206 SMARCA2P51531 1590 aa16.18■□□□□ 0.18
LINC01588-201ENST00000399206 ABCC8Q09428 1581 aa16.17■□□□□ 0.18
LINC01588-201ENST00000399206 BICRAQ9NZM4 1560 aa16.02■□□□□ 0.15
LINC01588-201ENST00000399206 SOGA1O94964 1423 aa16.01■□□□□ 0.15
LINC01588-201ENST00000399206 PABPN1Q86U42 306 aaKnown RBP eCLIP15.98■□□□□ 0.15
LINC01588-201ENST00000399206 WRNQ14191 1432 aaPredicted RBP eCLIP15.98■□□□□ 0.15
LINC01588-201ENST00000399206 CEP162Q5TB80 1403 aa15.97■□□□□ 0.15
LINC01588-201ENST00000399206 EEA1Q15075 1411 aa15.96■□□□□ 0.15
LINC01588-201ENST00000399206 PEG3Q9GZU2 1588 aa15.94■□□□□ 0.14
LINC01588-201ENST00000399206 TNIKQ9UKE5 1360 aa15.94■□□□□ 0.14
LINC01588-201ENST00000399206 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.93■□□□□ 0.14
LINC01588-201ENST00000399206 RUSC2Q8N2Y8 1516 aa15.93■□□□□ 0.14
LINC01588-201ENST00000399206 CSRNP3Q8WYN3 585 aa15.92■□□□□ 0.14
LINC01588-201ENST00000399206 CCER1Q8TC90 406 aaPredicted RBP15.91■□□□□ 0.14
LINC01588-201ENST00000399206 UBTFP17480 764 aaKnown RBP15.87■□□□□ 0.13
LINC01588-201ENST00000399206 TTBK1Q5TCY1 1321 aaPredicted RBP15.86■□□□□ 0.13
LINC01588-201ENST00000399206 GOLGA3Q08378 1498 aa15.85■□□□□ 0.13
LINC01588-201ENST00000399206 SYNJ1O43426 1573 aa15.82■□□□□ 0.12
LINC01588-201ENST00000399206 ATAD2BQ9ULI0 1458 aa15.8■□□□□ 0.12
LINC01588-201ENST00000399206 PHF23Q9BUL5 403 aaPredicted RBP15.78■□□□□ 0.12
LINC01588-201ENST00000399206 BAZ1BQ9UIG0 1483 aaKnown RBP15.77■□□□□ 0.12
LINC01588-201ENST00000399206 KIF21BO75037 1637 aa15.76■□□□□ 0.11
LINC01588-201ENST00000399206 CEP164Q9UPV0 1460 aa15.76■□□□□ 0.11
LINC01588-201ENST00000399206 SCAF1Q9H7N4 1312 aaKnown RBP15.69■□□□□ 0.1
LINC01588-201ENST00000399206 CLIP1P30622 1438 aa15.66■□□□□ 0.1
LINC01588-201ENST00000399206 TOP2BQ02880 1626 aa15.63■□□□□ 0.09
LINC01588-201ENST00000399206 DIEXFQ68CQ4 756 aaKnown RBP15.63■□□□□ 0.09
LINC01588-201ENST00000399206 RAPGEF2Q9Y4G8 1499 aa15.62■□□□□ 0.09
LINC01588-201ENST00000399206 VPS8Q8N3P4 1428 aa15.61■□□□□ 0.09
LINC01588-201ENST00000399206 BIVM-ERCC5R4GMW8 1640 aa15.59■□□□□ 0.09
LINC01588-201ENST00000399206 HNRNPUL2Q1KMD3 747 aaKnown RBP15.54■□□□□ 0.08
LINC01588-201ENST00000399206 ACIN1Q9UKV3 1341 aaKnown RBP15.54■□□□□ 0.08
LINC01588-201ENST00000399206 APLP2Q06481 763 aa15.54■□□□□ 0.08
LINC01588-201ENST00000399206 RANGAP1P46060 587 aaPredicted RBP15.52■□□□□ 0.07
LINC01588-201ENST00000399206 ZNF316A6NFI3 1004 aaPredicted RBP15.51■□□□□ 0.07
LINC01588-201ENST00000399206 HMGXB3Q12766 1538 aa15.51■□□□□ 0.07
LINC01588-201ENST00000399206 NEUROD1Q13562 356 aa15.5■□□□□ 0.07
LINC01588-201ENST00000399206 ERICH3Q5RHP9 1530 aa15.49■□□□□ 0.07
LINC01588-201ENST00000399206 NCAPD3P42695 1498 aa15.48■□□□□ 0.07
LINC01588-201ENST00000399206 PRXQ9BXM0 1461 aa15.46■□□□□ 0.07
LINC01588-201ENST00000399206 CENPBP07199 599 aaPredicted RBP15.45■□□□□ 0.06
LINC01588-201ENST00000399206 PELP1Q8IZL8 1130 aaKnown RBP15.45■□□□□ 0.06
LINC01588-201ENST00000399206 CUX1P39880 1505 aa15.44■□□□□ 0.06
LINC01588-201ENST00000399206 ARAP1Q96P48 1450 aa15.41■□□□□ 0.06
LINC01588-201ENST00000399206 KIF27Q86VH2 1401 aa15.38■□□□□ 0.05
LINC01588-201ENST00000399206 CFTRP13569 1480 aa15.38■□□□□ 0.05
LINC01588-201ENST00000399206 PRDM2Q13029 1718 aa15.35■□□□□ 0.05
LINC01588-201ENST00000399206 GTF3C3Q9Y5Q9 886 aa15.35■□□□□ 0.05
LINC01588-201ENST00000399206 KANK4Q5T7N3 995 aaPredicted RBP15.31■□□□□ 0.04
LINC01588-201ENST00000399206 MIER1Q8N108 512 aa15.28■□□□□ 0.04
LINC01588-201ENST00000399206 CLSPNQ9HAW4 1339 aa15.27■□□□□ 0.03
LINC01588-201ENST00000399206 DHX57Q6P158 1386 aaKnown RBP15.27■□□□□ 0.03
LINC01588-201ENST00000399206 ARHGAP35Q9NRY4 1499 aa15.26■□□□□ 0.03
LINC01588-201ENST00000399206 RRBP1Q9P2E9 1410 aaKnown RBP15.25■□□□□ 0.03
LINC01588-201ENST00000399206 YTHDC1Q96MU7 727 aaKnown RBP15.25■□□□□ 0.03
LINC01588-201ENST00000399206 CUX2O14529 1486 aa15.22■□□□□ 0.03
LINC01588-201ENST00000399206 IGF1RP08069 1367 aa15.2■□□□□ 0.02
LINC01588-201ENST00000399206 CADPSQ9ULU8 1353 aa15.19■□□□□ 0.02
LINC01588-201ENST00000399206 CCNB3Q8WWL7 1395 aa15.18■□□□□ 0.02
LINC01588-201ENST00000399206 FGD5Q6ZNL6 1462 aa15.16■□□□□ 0.02
LINC01588-201ENST00000399206 CARMIL1Q5VZK9 1371 aa15.14■□□□□ 0.01
LINC01588-201ENST00000399206 TIAM1Q13009 1591 aa15.13■□□□□ 0.01
LINC01588-201ENST00000399206 MAP3K1Q13233 1512 aa15.12■□□□□ 0.01
LINC01588-201ENST00000399206 ITGAEP38570 1179 aa15.11■□□□□ 0.01
LINC01588-201ENST00000399206 CC2D2AQ9P2K1 1620 aa15.08■□□□□ 0.01
LINC01588-201ENST00000399206 LRRC9Q6ZRR7 1453 aa15.06■□□□□ 0
LINC01588-201ENST00000399206 FANCD2Q9BXW9 1451 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms