RNA–Protein interactions for RNA: ENST00000395469.6

SNCAIP-205, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 3,126 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-205ENST00000395469 NISCHQ9Y2I1 1504 aa23.77■■□□□ 1.4
SNCAIP-205ENST00000395469 SHROOM4Q9ULL8 1493 aa20.46■□□□□ 0.87
SNCAIP-205ENST00000395469 CCDC180Q9P1Z9 1646 aa20.13■□□□□ 0.81
SNCAIP-205ENST00000395469 ZCCHC6Q5VYS8 1495 aaKnown RBP20.07■□□□□ 0.8
SNCAIP-205ENST00000395469 DCAF8L2P0C7V8 631 aa20.05■□□□□ 0.8
SNCAIP-205ENST00000395469 SUPT5HO00267 1087 aaKnown RBP20.04■□□□□ 0.8
SNCAIP-205ENST00000395469 DCAF1Q9Y4B6 1507 aa19.39■□□□□ 0.69
SNCAIP-205ENST00000395469 PELP1Q8IZL8 1130 aaKnown RBP19.34■□□□□ 0.69
SNCAIP-205ENST00000395469 CHIC1Q5VXU3 224 aa19.33■□□□□ 0.68
SNCAIP-205ENST00000395469 MYO15BQ96JP2 1530 aa19.21■□□□□ 0.67
SNCAIP-205ENST00000395469 SCRIBQ14160 1630 aa19.04■□□□□ 0.64
SNCAIP-205ENST00000395469 ABCC9O60706 1549 aa18.96■□□□□ 0.63
SNCAIP-205ENST00000395469 HRCP23327 699 aa18.88■□□□□ 0.61
SNCAIP-205ENST00000395469 LOC105371045A0A1W2PR82 267 aa18.84■□□□□ 0.61
SNCAIP-205ENST00000395469 RSF1Q96T23 1441 aaPredicted RBP18.83■□□□□ 0.6
SNCAIP-205ENST00000395469 MYT1Q01538 1121 aa18.8■□□□□ 0.6
SNCAIP-205ENST00000395469 PCGF6Q9BYE7 350 aa18.75■□□□□ 0.59
SNCAIP-205ENST00000395469 NACADO15069 1562 aa18.69■□□□□ 0.58
SNCAIP-205ENST00000395469 CECR2Q9BXF3 1484 aa18.63■□□□□ 0.57
SNCAIP-205ENST00000395469 RB1CC1Q8TDY2 1594 aa18.62■□□□□ 0.57
SNCAIP-205ENST00000395469 TRIM41Q8WV44 630 aa18.6■□□□□ 0.57
SNCAIP-205ENST00000395469 FAM9AQ8IZU1 332 aaPredicted RBP18.56■□□□□ 0.56
SNCAIP-205ENST00000395469 MROH2BQ7Z745 1585 aa18.52■□□□□ 0.56
SNCAIP-205ENST00000395469 PPARGC1BQ86YN6 1023 aaKnown RBP18.49■□□□□ 0.55
SNCAIP-205ENST00000395469 EHMT2Q96KQ7 1210 aa18.49■□□□□ 0.55
SNCAIP-205ENST00000395469 WIZO95785 1651 aa18.41■□□□□ 0.54
SNCAIP-205ENST00000395469 TRIM26Q12899 539 aaPredicted RBP18.31■□□□□ 0.52
SNCAIP-205ENST00000395469 SCAF1Q9H7N4 1312 aaKnown RBP18.3■□□□□ 0.52
SNCAIP-205ENST00000395469 BAZ1AQ9NRL2 1556 aaPredicted RBP18.25■□□□□ 0.51
SNCAIP-205ENST00000395469 PABPN1Q86U42 306 aaKnown RBP eCLIP18.2■□□□□ 0.5
SNCAIP-205ENST00000395469 UNC13AQ9UPW8 1703 aa18.13■□□□□ 0.49
SNCAIP-205ENST00000395469 SMARCA4P51532 1647 aa18.11■□□□□ 0.49
SNCAIP-205ENST00000395469 TOP2AP11388 1531 aaKnown RBP18.07■□□□□ 0.48
SNCAIP-205ENST00000395469 CCDC88BA6NC98 1476 aa18.06■□□□□ 0.48
SNCAIP-205ENST00000395469 ABCC8Q09428 1581 aa18.03■□□□□ 0.48
SNCAIP-205ENST00000395469 EIF4G1Q04637 1599 aaKnown RBP18.02■□□□□ 0.47
SNCAIP-205ENST00000395469 SMARCA2P51531 1590 aa17.98■□□□□ 0.47
SNCAIP-205ENST00000395469 BICRAQ9NZM4 1560 aa17.93■□□□□ 0.46
SNCAIP-205ENST00000395469 SOGA1O94964 1423 aa17.86■□□□□ 0.45
SNCAIP-205ENST00000395469 TTBK1Q5TCY1 1321 aaPredicted RBP17.86■□□□□ 0.45
SNCAIP-205ENST00000395469 ZEB1P37275 1124 aaPredicted RBP17.82■□□□□ 0.44
SNCAIP-205ENST00000395469 UBTFP17480 764 aaKnown RBP17.77■□□□□ 0.44
SNCAIP-205ENST00000395469 RUSC2Q8N2Y8 1516 aa17.77■□□□□ 0.44
SNCAIP-205ENST00000395469 CSRNP3Q8WYN3 585 aa17.76■□□□□ 0.43
SNCAIP-205ENST00000395469 CEP162Q5TB80 1403 aa17.72■□□□□ 0.43
SNCAIP-205ENST00000395469 WRNQ14191 1432 aaPredicted RBP eCLIP17.71■□□□□ 0.43
SNCAIP-205ENST00000395469 ATAD2BQ9ULI0 1458 aa17.7■□□□□ 0.42
SNCAIP-205ENST00000395469 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.7■□□□□ 0.42
SNCAIP-205ENST00000395469 PEG3Q9GZU2 1588 aa17.69■□□□□ 0.42
SNCAIP-205ENST00000395469 BAZ1BQ9UIG0 1483 aaKnown RBP17.68■□□□□ 0.42
SNCAIP-205ENST00000395469 TNIKQ9UKE5 1360 aa17.65■□□□□ 0.42
SNCAIP-205ENST00000395469 EEA1Q15075 1411 aa17.64■□□□□ 0.41
SNCAIP-205ENST00000395469 CCER1Q8TC90 406 aaPredicted RBP17.63■□□□□ 0.41
SNCAIP-205ENST00000395469 ACIN1Q9UKV3 1341 aaKnown RBP17.61■□□□□ 0.41
SNCAIP-205ENST00000395469 SYNJ1O43426 1573 aa17.59■□□□□ 0.41
SNCAIP-205ENST00000395469 GOLGA3Q08378 1498 aa17.57■□□□□ 0.4
SNCAIP-205ENST00000395469 RANGAP1P46060 587 aaPredicted RBP17.56■□□□□ 0.4
SNCAIP-205ENST00000395469 NEUROD1Q13562 356 aa17.53■□□□□ 0.4
SNCAIP-205ENST00000395469 BCL11AQ9H165 835 aa17.53■□□□□ 0.4
SNCAIP-205ENST00000395469 GTF3C3Q9Y5Q9 886 aa17.53■□□□□ 0.4
SNCAIP-205ENST00000395469 CEP164Q9UPV0 1460 aa17.47■□□□□ 0.39
SNCAIP-205ENST00000395469 PRKCSHP14314 528 aaPredicted RBP17.42■□□□□ 0.38
SNCAIP-205ENST00000395469 CLIP1P30622 1438 aa17.42■□□□□ 0.38
SNCAIP-205ENST00000395469 RAPGEF2Q9Y4G8 1499 aa17.41■□□□□ 0.38
SNCAIP-205ENST00000395469 CENPBP07199 599 aaPredicted RBP17.39■□□□□ 0.37
SNCAIP-205ENST00000395469 KIF21BO75037 1637 aa17.38■□□□□ 0.37
SNCAIP-205ENST00000395469 HNRNPUL2Q1KMD3 747 aaKnown RBP17.35■□□□□ 0.37
SNCAIP-205ENST00000395469 APLP2Q06481 763 aa17.34■□□□□ 0.37
SNCAIP-205ENST00000395469 TOP2BQ02880 1626 aa17.33■□□□□ 0.37
SNCAIP-205ENST00000395469 NCAPD3P42695 1498 aa17.33■□□□□ 0.36
SNCAIP-205ENST00000395469 VPS8Q8N3P4 1428 aa17.29■□□□□ 0.36
SNCAIP-205ENST00000395469 HMGXB3Q12766 1538 aa17.28■□□□□ 0.36
SNCAIP-205ENST00000395469 BIVM-ERCC5R4GMW8 1640 aa17.24■□□□□ 0.35
SNCAIP-205ENST00000395469 CUX1P39880 1505 aa17.23■□□□□ 0.35
SNCAIP-205ENST00000395469 DIEXFQ68CQ4 756 aaKnown RBP17.19■□□□□ 0.34
SNCAIP-205ENST00000395469 CFTRP13569 1480 aa17.19■□□□□ 0.34
SNCAIP-205ENST00000395469 PRXQ9BXM0 1461 aa17.17■□□□□ 0.34
SNCAIP-205ENST00000395469 KIF27Q86VH2 1401 aa17.16■□□□□ 0.34
SNCAIP-205ENST00000395469 ERICH3Q5RHP9 1530 aa17.12■□□□□ 0.33
SNCAIP-205ENST00000395469 KANK4Q5T7N3 995 aaPredicted RBP17.1■□□□□ 0.33
SNCAIP-205ENST00000395469 ARAP1Q96P48 1450 aa17.09■□□□□ 0.33
SNCAIP-205ENST00000395469 ZNF316A6NFI3 1004 aaPredicted RBP17.06■□□□□ 0.32
SNCAIP-205ENST00000395469 CADPSQ9ULU8 1353 aa17.06■□□□□ 0.32
SNCAIP-205ENST00000395469 CUX2O14529 1486 aa17.05■□□□□ 0.32
SNCAIP-205ENST00000395469 ANP32EQ9BTT0 268 aa17.03■□□□□ 0.32
SNCAIP-205ENST00000395469 ERICH6Q7L0X2 663 aa16.99■□□□□ 0.31
SNCAIP-205ENST00000395469 IGF1RP08069 1367 aa16.99■□□□□ 0.31
SNCAIP-205ENST00000395469 ITGAEP38570 1179 aa16.98■□□□□ 0.31
SNCAIP-205ENST00000395469 ARHGAP35Q9NRY4 1499 aa16.97■□□□□ 0.31
SNCAIP-205ENST00000395469 CC2D2AQ9P2K1 1620 aa16.97■□□□□ 0.31
SNCAIP-205ENST00000395469 FGD5Q6ZNL6 1462 aa16.97■□□□□ 0.31
SNCAIP-205ENST00000395469 CARMIL1Q5VZK9 1371 aa16.94■□□□□ 0.3
SNCAIP-205ENST00000395469 PRDM2Q13029 1718 aa16.92■□□□□ 0.3
SNCAIP-205ENST00000395469 P3H3Q8IVL6 736 aa16.92■□□□□ 0.3
SNCAIP-205ENST00000395469 FANCD2Q9BXW9 1451 aa16.9■□□□□ 0.3
SNCAIP-205ENST00000395469 YTHDC1Q96MU7 727 aaKnown RBP16.9■□□□□ 0.3
SNCAIP-205ENST00000395469 ATP1B4Q9UN42 357 aaPredicted RBP16.9■□□□□ 0.3
SNCAIP-205ENST00000395469 DHX57Q6P158 1386 aaKnown RBP16.86■□□□□ 0.29
SNCAIP-205ENST00000395469 NESP48681 1621 aa16.86■□□□□ 0.29
SNCAIP-205ENST00000395469 RAD54L2Q9Y4B4 1467 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms