RNA–Protein interactions for RNA: ENST00000394604.5

CLDN12-202, Transcript of claudin 12, humanhuman

TSL 5

Gene CLDN12, Length 846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-202ENST00000394604 AEBP2Q6ZN18 517 aaPredicted RBP25■■□□□ 1.59
CLDN12-202ENST00000394604 CHIC1Q5VXU3 224 aa23.91■■□□□ 1.42
CLDN12-202ENST00000394604 SENP3Q9H4L4 574 aaPredicted RBP21.25■□□□□ 0.99
CLDN12-202ENST00000394604 PHF23Q9BUL5 403 aaPredicted RBP21.03■□□□□ 0.96
CLDN12-202ENST00000394604 NISCHQ9Y2I1 1504 aa20.91■□□□□ 0.94
CLDN12-202ENST00000394604 FOXD1Q16676 465 aa19.81■□□□□ 0.76
CLDN12-202ENST00000394604 PLPPR3Q6T4P5 718 aa19.18■□□□□ 0.66
CLDN12-202ENST00000394604 PPP6R1Q9UPN7 881 aa18.69■□□□□ 0.58
CLDN12-202ENST00000394604 ADRA2BP18089 450 aa18.66■□□□□ 0.58
CLDN12-202ENST00000394604 PIAS4Q8N2W9 510 aaPredicted RBP18.59■□□□□ 0.57
CLDN12-202ENST00000394604 MSH5O43196 834 aa18.44■□□□□ 0.54
CLDN12-202ENST00000394604 CCDC180Q9P1Z9 1646 aa18.34■□□□□ 0.53
CLDN12-202ENST00000394604 POTEDQ86YR6 584 aa17.69■□□□□ 0.42
CLDN12-202ENST00000394604 ZCCHC6Q5VYS8 1495 aaKnown RBP17.53■□□□□ 0.4
CLDN12-202ENST00000394604 ABCC9O60706 1549 aa17.43■□□□□ 0.38
CLDN12-202ENST00000394604 DCAF1Q9Y4B6 1507 aa17.32■□□□□ 0.36
CLDN12-202ENST00000394604 DCAF8L2P0C7V8 631 aa17.3■□□□□ 0.36
CLDN12-202ENST00000394604 MYO15BQ96JP2 1530 aa17.19■□□□□ 0.34
CLDN12-202ENST00000394604 NACADO15069 1562 aa17.13■□□□□ 0.33
CLDN12-202ENST00000394604 MAPK8IP2Q13387 824 aaPredicted RBP17.08■□□□□ 0.32
CLDN12-202ENST00000394604 RB1CC1Q8TDY2 1594 aa17.01■□□□□ 0.31
CLDN12-202ENST00000394604 SCAF1Q9H7N4 1312 aaKnown RBP16.99■□□□□ 0.31
CLDN12-202ENST00000394604 DMRT2Q9Y5R5 561 aa16.89■□□□□ 0.29
CLDN12-202ENST00000394604 SHROOM4Q9ULL8 1493 aa16.88■□□□□ 0.29
CLDN12-202ENST00000394604 PPP4R3CPQ6ZMV5 832 aa16.86■□□□□ 0.29
CLDN12-202ENST00000394604 SCRIBQ14160 1630 aa16.78■□□□□ 0.28
CLDN12-202ENST00000394604 UNC13AQ9UPW8 1703 aa16.6■□□□□ 0.25
CLDN12-202ENST00000394604 CNKSR2Q8WXI2 1034 aa16.47■□□□□ 0.23
CLDN12-202ENST00000394604 BICRAQ9NZM4 1560 aa16.44■□□□□ 0.22
CLDN12-202ENST00000394604 PABPN1Q86U42 306 aaKnown RBP eCLIP16.4■□□□□ 0.22
CLDN12-202ENST00000394604 HOXD11P31277 338 aaPredicted RBP16.32■□□□□ 0.2
CLDN12-202ENST00000394604 DCAF8L1A6NGE4 600 aa16.28■□□□□ 0.2
CLDN12-202ENST00000394604 RNF216Q9NWF9 866 aaPredicted RBP16.27■□□□□ 0.2
CLDN12-202ENST00000394604 NCBP3Q53F19 620 aaKnown RBP16.25■□□□□ 0.19
CLDN12-202ENST00000394604 CECR2Q9BXF3 1484 aa16.22■□□□□ 0.19
CLDN12-202ENST00000394604 SUPT5HO00267 1087 aaKnown RBP16.19■□□□□ 0.18
CLDN12-202ENST00000394604 BAZ1AQ9NRL2 1556 aaPredicted RBP16.17■□□□□ 0.18
CLDN12-202ENST00000394604 RSF1Q96T23 1441 aaPredicted RBP16.14■□□□□ 0.17
CLDN12-202ENST00000394604 MROH2BQ7Z745 1585 aa16.12■□□□□ 0.17
CLDN12-202ENST00000394604 SMARCA4P51532 1647 aa16.1■□□□□ 0.17
CLDN12-202ENST00000394604 NPM3O75607 178 aaKnown RBP16.05■□□□□ 0.16
CLDN12-202ENST00000394604 EIF4G1Q04637 1599 aaKnown RBP15.98■□□□□ 0.15
CLDN12-202ENST00000394604 WIZO95785 1651 aa15.98■□□□□ 0.15
CLDN12-202ENST00000394604 KCNA4P22459 653 aa15.95■□□□□ 0.14
CLDN12-202ENST00000394604 PEG3Q9GZU2 1588 aa15.92■□□□□ 0.14
CLDN12-202ENST00000394604 SMARCA2P51531 1590 aa15.9■□□□□ 0.14
CLDN12-202ENST00000394604 ATAD2BQ9ULI0 1458 aa15.88■□□□□ 0.13
CLDN12-202ENST00000394604 TOP2AP11388 1531 aaKnown RBP15.85■□□□□ 0.13
CLDN12-202ENST00000394604 NCAPD3P42695 1498 aa15.79■□□□□ 0.12
CLDN12-202ENST00000394604 BAZ1BQ9UIG0 1483 aaKnown RBP15.79■□□□□ 0.12
CLDN12-202ENST00000394604 CC2D2AQ9P2K1 1620 aa15.78■□□□□ 0.12
CLDN12-202ENST00000394604 RNF39Q9H2S5 420 aa15.76■□□□□ 0.11
CLDN12-202ENST00000394604 HMGXB3Q12766 1538 aa15.75■□□□□ 0.11
CLDN12-202ENST00000394604 CACNB1Q02641 598 aaPredicted RBP15.75■□□□□ 0.11
CLDN12-202ENST00000394604 CCDC88BA6NC98 1476 aa15.66■□□□□ 0.1
CLDN12-202ENST00000394604 DNAJC5BQ9UF47 199 aa15.64■□□□□ 0.09
CLDN12-202ENST00000394604 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.62■□□□□ 0.09
CLDN12-202ENST00000394604 C1QBPQ07021 282 aaKnown RBP15.51■□□□□ 0.07
CLDN12-202ENST00000394604 CFTRP13569 1480 aa15.39■□□□□ 0.05
CLDN12-202ENST00000394604 CADPSQ9ULU8 1353 aa15.37■□□□□ 0.05
CLDN12-202ENST00000394604 PRDM2Q13029 1718 aa15.31■□□□□ 0.04
CLDN12-202ENST00000394604 U3KPZ7 1027 aaPredicted RBP15.3■□□□□ 0.04
CLDN12-202ENST00000394604 LAMC3Q9Y6N6 1575 aa15.28■□□□□ 0.04
CLDN12-202ENST00000394604 SLC4A2P04920 1241 aa15.27■□□□□ 0.04
CLDN12-202ENST00000394604 TRIM41Q8WV44 630 aa15.27■□□□□ 0.04
CLDN12-202ENST00000394604 ABCC8Q09428 1581 aa15.24■□□□□ 0.03
CLDN12-202ENST00000394604 NESP48681 1621 aa15.23■□□□□ 0.03
CLDN12-202ENST00000394604 WRNQ14191 1432 aaPredicted RBP eCLIP15.22■□□□□ 0.03
CLDN12-202ENST00000394604 FANCD2Q9BXW9 1451 aa15.19■□□□□ 0.02
CLDN12-202ENST00000394604 PDS5BQ9NTI5 1447 aa15.18■□□□□ 0.02
CLDN12-202ENST00000394604 CEP164Q9UPV0 1460 aa15.13■□□□□ 0.01
CLDN12-202ENST00000394604 SYNJ1O43426 1573 aa15.12■□□□□ 0.01
CLDN12-202ENST00000394604 TOP2BQ02880 1626 aa15.11■□□□□ 0.01
CLDN12-202ENST00000394604 BIVM-ERCC5R4GMW8 1640 aa15.1■□□□□ 0.01
CLDN12-202ENST00000394604 CUX1P39880 1505 aa15.09■□□□□ 0.01
CLDN12-202ENST00000394604 SLC4A1APQ9BWU0 796 aaKnown RBP15.08■□□□□ 0
CLDN12-202ENST00000394604 KIF21AQ7Z4S6 1674 aa15.06■□□□□ 0
CLDN12-202ENST00000394604 SPINK5Q9NQ38 1064 aaPredicted RBP15.05■□□□□ -0
CLDN12-202ENST00000394604 DNMBPQ6XZF7 1577 aa15.03■□□□□ -0
CLDN12-202ENST00000394604 CAPN15O75808 1086 aa15.02■□□□□ -0
CLDN12-202ENST00000394604 TOPBP1Q92547 1522 aa15.01□□□□□ -0.01
CLDN12-202ENST00000394604 ERCC6Q03468 1493 aa15□□□□□ -0.01
CLDN12-202ENST00000394604 URB2Q14146 1524 aaKnown RBP14.99□□□□□ -0.01
CLDN12-202ENST00000394604 MRC2Q9UBG0 1479 aa14.98□□□□□ -0.01
CLDN12-202ENST00000394604 FGD5Q6ZNL6 1462 aa14.96□□□□□ -0.01
CLDN12-202ENST00000394604 EEA1Q15075 1411 aa14.96□□□□□ -0.01
CLDN12-202ENST00000394604 FAM9AQ8IZU1 332 aaPredicted RBP14.94□□□□□ -0.02
CLDN12-202ENST00000394604 SOGA1O94964 1423 aa14.93□□□□□ -0.02
CLDN12-202ENST00000394604 POLA1P09884 1462 aaPredicted RBP14.91□□□□□ -0.02
CLDN12-202ENST00000394604 WDR62O43379 1518 aa14.9□□□□□ -0.02
CLDN12-202ENST00000394604 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.88□□□□□ -0.03
CLDN12-202ENST00000394604 HNRNPUL2Q1KMD3 747 aaKnown RBP14.88□□□□□ -0.03
CLDN12-202ENST00000394604 RUSC2Q8N2Y8 1516 aa14.87□□□□□ -0.03
CLDN12-202ENST00000394604 THOC2Q8NI27 1593 aaKnown RBP14.87□□□□□ -0.03
CLDN12-202ENST00000394604 KIF27Q86VH2 1401 aa14.86□□□□□ -0.03
CLDN12-202ENST00000394604 CSRNP3Q8WYN3 585 aa14.86□□□□□ -0.03
CLDN12-202ENST00000394604 APLP2Q06481 763 aa14.85□□□□□ -0.03
CLDN12-202ENST00000394604 CUX2O14529 1486 aa14.84□□□□□ -0.03
CLDN12-202ENST00000394604 RAD54L2Q9Y4B4 1467 aa14.84□□□□□ -0.03
CLDN12-202ENST00000394604 ABCA10Q8WWZ4 1543 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms