RNA–Protein interactions for RNA: ENST00000393822.7

SFTPB-201, Transcript of surfactant protein B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFTPB, Length 3,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPB-201ENST00000393822 NISCHQ9Y2I1 1504 aa21.37■■□□□ 1.01
SFTPB-201ENST00000393822 DCAF8L2P0C7V8 631 aa19.78■□□□□ 0.76
SFTPB-201ENST00000393822 SHROOM4Q9ULL8 1493 aa19.3■□□□□ 0.68
SFTPB-201ENST00000393822 SUPT5HO00267 1087 aaKnown RBP18.84■□□□□ 0.61
SFTPB-201ENST00000393822 ABCC9O60706 1549 aa18.23■□□□□ 0.51
SFTPB-201ENST00000393822 EHMT2Q96KQ7 1210 aa18■□□□□ 0.47
SFTPB-201ENST00000393822 ZCCHC6Q5VYS8 1495 aaKnown RBP17.83■□□□□ 0.44
SFTPB-201ENST00000393822 CCDC180Q9P1Z9 1646 aa17.78■□□□□ 0.44
SFTPB-201ENST00000393822 PABPN1Q86U42 306 aaKnown RBP eCLIP17.77■□□□□ 0.44
SFTPB-201ENST00000393822 FAM9AQ8IZU1 332 aaPredicted RBP17.66■□□□□ 0.42
SFTPB-201ENST00000393822 SCRIBQ14160 1630 aa17.55■□□□□ 0.4
SFTPB-201ENST00000393822 CHIC1Q5VXU3 224 aa17.37■□□□□ 0.37
SFTPB-201ENST00000393822 LOC105371045A0A1W2PR82 267 aa17.32■□□□□ 0.36
SFTPB-201ENST00000393822 TRIM41Q8WV44 630 aa17.26■□□□□ 0.35
SFTPB-201ENST00000393822 TTBK1Q5TCY1 1321 aaPredicted RBP17.19■□□□□ 0.34
SFTPB-201ENST00000393822 RANGAP1P46060 587 aaPredicted RBP17.16■□□□□ 0.34
SFTPB-201ENST00000393822 CECR2Q9BXF3 1484 aa17.09■□□□□ 0.33
SFTPB-201ENST00000393822 PPARGC1BQ86YN6 1023 aaKnown RBP17.09■□□□□ 0.33
SFTPB-201ENST00000393822 RSF1Q96T23 1441 aaPredicted RBP16.98■□□□□ 0.31
SFTPB-201ENST00000393822 PCGF6Q9BYE7 350 aa16.97■□□□□ 0.31
SFTPB-201ENST00000393822 DCAF1Q9Y4B6 1507 aa16.95■□□□□ 0.3
SFTPB-201ENST00000393822 RB1CC1Q8TDY2 1594 aa16.92■□□□□ 0.3
SFTPB-201ENST00000393822 NACADO15069 1562 aa16.91■□□□□ 0.3
SFTPB-201ENST00000393822 MYO15BQ96JP2 1530 aa16.89■□□□□ 0.29
SFTPB-201ENST00000393822 MROH2BQ7Z745 1585 aa16.8■□□□□ 0.28
SFTPB-201ENST00000393822 UBTFP17480 764 aaKnown RBP16.76■□□□□ 0.27
SFTPB-201ENST00000393822 WIZO95785 1651 aa16.62■□□□□ 0.25
SFTPB-201ENST00000393822 ATP1B4Q9UN42 357 aaPredicted RBP16.49■□□□□ 0.23
SFTPB-201ENST00000393822 BAZ1AQ9NRL2 1556 aaPredicted RBP16.45■□□□□ 0.22
SFTPB-201ENST00000393822 CCDC88BA6NC98 1476 aa16.39■□□□□ 0.21
SFTPB-201ENST00000393822 ABCC8Q09428 1581 aa16.39■□□□□ 0.21
SFTPB-201ENST00000393822 BAZ1BQ9UIG0 1483 aaKnown RBP16.36■□□□□ 0.21
SFTPB-201ENST00000393822 DNAJC5BQ9UF47 199 aa16.33■□□□□ 0.21
SFTPB-201ENST00000393822 APLP2Q06481 763 aa16.32■□□□□ 0.2
SFTPB-201ENST00000393822 CSRNP3Q8WYN3 585 aa16.31■□□□□ 0.2
SFTPB-201ENST00000393822 SMARCA4P51532 1647 aa16.28■□□□□ 0.2
SFTPB-201ENST00000393822 P3H3Q8IVL6 736 aa16.26■□□□□ 0.19
SFTPB-201ENST00000393822 BICRAQ9NZM4 1560 aa16.26■□□□□ 0.19
SFTPB-201ENST00000393822 SOGA1O94964 1423 aa16.26■□□□□ 0.19
SFTPB-201ENST00000393822 TRIM26Q12899 539 aaPredicted RBP16.23■□□□□ 0.19
SFTPB-201ENST00000393822 ITGAEP38570 1179 aa16.22■□□□□ 0.19
SFTPB-201ENST00000393822 UNC13AQ9UPW8 1703 aa16.22■□□□□ 0.19
SFTPB-201ENST00000393822 ATAD2BQ9ULI0 1458 aa16.22■□□□□ 0.19
SFTPB-201ENST00000393822 HNRNPUL2Q1KMD3 747 aaKnown RBP16.2■□□□□ 0.18
SFTPB-201ENST00000393822 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.17■□□□□ 0.18
SFTPB-201ENST00000393822 ARID3CA6NKF2 412 aa16.16■□□□□ 0.18
SFTPB-201ENST00000393822 WRNQ14191 1432 aaPredicted RBP eCLIP16.15■□□□□ 0.18
SFTPB-201ENST00000393822 RUSC2Q8N2Y8 1516 aa16.15■□□□□ 0.18
SFTPB-201ENST00000393822 TOP2AP11388 1531 aaKnown RBP16.14■□□□□ 0.17
SFTPB-201ENST00000393822 CCER1Q8TC90 406 aaPredicted RBP16.13■□□□□ 0.17
SFTPB-201ENST00000393822 FBLN2P98095 1184 aa16.09■□□□□ 0.17
SFTPB-201ENST00000393822 SMARCA2P51531 1590 aa16.07■□□□□ 0.16
SFTPB-201ENST00000393822 HRCP23327 699 aa16.05■□□□□ 0.16
SFTPB-201ENST00000393822 EIF4G1Q04637 1599 aaKnown RBP16.03■□□□□ 0.16
SFTPB-201ENST00000393822 CEP162Q5TB80 1403 aa15.9■□□□□ 0.14
SFTPB-201ENST00000393822 NESP48681 1621 aa15.9■□□□□ 0.14
SFTPB-201ENST00000393822 TDRD9Q8NDG6 1382 aaKnown RBP15.83■□□□□ 0.12
SFTPB-201ENST00000393822 CADPSQ9ULU8 1353 aa15.83■□□□□ 0.12
SFTPB-201ENST00000393822 CC2D2AQ9P2K1 1620 aa15.82■□□□□ 0.12
SFTPB-201ENST00000393822 FAM50AQ14320 339 aaKnown RBP15.81■□□□□ 0.12
SFTPB-201ENST00000393822 CUX2O14529 1486 aa15.8■□□□□ 0.12
SFTPB-201ENST00000393822 NCAPD3P42695 1498 aa15.8■□□□□ 0.12
SFTPB-201ENST00000393822 CLIP1P30622 1438 aa15.8■□□□□ 0.12
SFTPB-201ENST00000393822 RAPGEF2Q9Y4G8 1499 aa15.77■□□□□ 0.11
SFTPB-201ENST00000393822 SYNJ1O43426 1573 aa15.77■□□□□ 0.11
SFTPB-201ENST00000393822 GOLGA3Q08378 1498 aa15.74■□□□□ 0.11
SFTPB-201ENST00000393822 KIF27Q86VH2 1401 aa15.72■□□□□ 0.11
SFTPB-201ENST00000393822 RAD54L2Q9Y4B4 1467 aa15.71■□□□□ 0.11
SFTPB-201ENST00000393822 TNIKQ9UKE5 1360 aa15.71■□□□□ 0.1
SFTPB-201ENST00000393822 KANK4Q5T7N3 995 aaPredicted RBP15.69■□□□□ 0.1
SFTPB-201ENST00000393822 FANCD2Q9BXW9 1451 aa15.68■□□□□ 0.1
SFTPB-201ENST00000393822 CEP164Q9UPV0 1460 aa15.65■□□□□ 0.1
SFTPB-201ENST00000393822 CARMIL1Q5VZK9 1371 aa15.64■□□□□ 0.09
SFTPB-201ENST00000393822 ERCC6Q03468 1493 aa15.64■□□□□ 0.09
SFTPB-201ENST00000393822 EEA1Q15075 1411 aa15.61■□□□□ 0.09
SFTPB-201ENST00000393822 CFTRP13569 1480 aa15.61■□□□□ 0.09
SFTPB-201ENST00000393822 CHMP7Q8WUX9 453 aaPredicted RBP15.6■□□□□ 0.09
SFTPB-201ENST00000393822 FGD5Q6ZNL6 1462 aa15.59■□□□□ 0.09
SFTPB-201ENST00000393822 CUX1P39880 1505 aa15.59■□□□□ 0.09
SFTPB-201ENST00000393822 NEUROD1Q13562 356 aa15.57■□□□□ 0.08
SFTPB-201ENST00000393822 ZEB1P37275 1124 aaPredicted RBP15.55■□□□□ 0.08
SFTPB-201ENST00000393822 CHIC2Q9UKJ5 165 aa15.55■□□□□ 0.08
SFTPB-201ENST00000393822 YTHDC1Q96MU7 727 aaKnown RBP15.54■□□□□ 0.08
SFTPB-201ENST00000393822 PEG3Q9GZU2 1588 aa15.54■□□□□ 0.08
SFTPB-201ENST00000393822 ZNF777Q9ULD5 760 aaPredicted RBP15.54■□□□□ 0.08
SFTPB-201ENST00000393822 IGF1RP08069 1367 aa15.53■□□□□ 0.08
SFTPB-201ENST00000393822 HMGXB3Q12766 1538 aa15.52■□□□□ 0.08
SFTPB-201ENST00000393822 PDS5BQ9NTI5 1447 aa15.52■□□□□ 0.07
SFTPB-201ENST00000393822 AQRO60306 1485 aaKnown RBP eCLIP15.49■□□□□ 0.07
SFTPB-201ENST00000393822 CNGB1Q14028 1251 aaPredicted RBP15.48■□□□□ 0.07
SFTPB-201ENST00000393822 FHOD3Q2V2M9 1422 aa15.46■□□□□ 0.07
SFTPB-201ENST00000393822 TRIM52Q96A61 297 aa15.42■□□□□ 0.06
SFTPB-201ENST00000393822 MYT1LQ9UL68 1186 aa15.42■□□□□ 0.06
SFTPB-201ENST00000393822 VPS8Q8N3P4 1428 aa15.41■□□□□ 0.06
SFTPB-201ENST00000393822 POLA1P09884 1462 aaPredicted RBP15.4■□□□□ 0.06
SFTPB-201ENST00000393822 TOP2BQ02880 1626 aa15.4■□□□□ 0.06
SFTPB-201ENST00000393822 HIRIP3Q9BW71 556 aaPredicted RBP15.38■□□□□ 0.05
SFTPB-201ENST00000393822 TOPBP1Q92547 1522 aa15.38■□□□□ 0.05
SFTPB-201ENST00000393822 RRP7BPQ9NSQ0 103 aa15.37■□□□□ 0.05
SFTPB-201ENST00000393822 MTUS2Q5JR59 1369 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms