RNA–Protein interactions for RNA: ENST00000376781.2

UBBP2-201, Transcript of ubiquitin B pseudogene 2, humanhuman

BASIC

Gene UBBP2, Length 231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP2-201ENST00000376781 AEBP2Q6ZN18 517 aaPredicted RBP11.02□□□□□ -0.65
UBBP2-201ENST00000376781 CHIC1Q5VXU3 224 aa10.76□□□□□ -0.69
UBBP2-201ENST00000376781 NISCHQ9Y2I1 1504 aa10.58□□□□□ -0.72
UBBP2-201ENST00000376781 PHF23Q9BUL5 403 aaPredicted RBP9.53□□□□□ -0.88
UBBP2-201ENST00000376781 CCDC180Q9P1Z9 1646 aa9.31□□□□□ -0.92
UBBP2-201ENST00000376781 SENP3Q9H4L4 574 aaPredicted RBP9.23□□□□□ -0.93
UBBP2-201ENST00000376781 ABCC9O60706 1549 aa8.87□□□□□ -0.99
UBBP2-201ENST00000376781 ZCCHC6Q5VYS8 1495 aaKnown RBP8.87□□□□□ -0.99
UBBP2-201ENST00000376781 DCAF1Q9Y4B6 1507 aa8.78□□□□□ -1
UBBP2-201ENST00000376781 MYO15BQ96JP2 1530 aa8.75□□□□□ -1.01
UBBP2-201ENST00000376781 PLPPR3Q6T4P5 718 aa8.7□□□□□ -1.02
UBBP2-201ENST00000376781 NACADO15069 1562 aa8.69□□□□□ -1.02
UBBP2-201ENST00000376781 DCAF8L2P0C7V8 631 aa8.66□□□□□ -1.02
UBBP2-201ENST00000376781 RB1CC1Q8TDY2 1594 aa8.65□□□□□ -1.03
UBBP2-201ENST00000376781 FOXD1Q16676 465 aa8.62□□□□□ -1.03
UBBP2-201ENST00000376781 PELP1Q8IZL8 1130 aaKnown RBP8.56□□□□□ -1.04
UBBP2-201ENST00000376781 HRCP23327 699 aa8.52□□□□□ -1.05
UBBP2-201ENST00000376781 SCRIBQ14160 1630 aa8.49□□□□□ -1.05
UBBP2-201ENST00000376781 UNC13AQ9UPW8 1703 aa8.45□□□□□ -1.06
UBBP2-201ENST00000376781 SHROOM4Q9ULL8 1493 aa8.45□□□□□ -1.06
UBBP2-201ENST00000376781 BICRAQ9NZM4 1560 aa8.39□□□□□ -1.07
UBBP2-201ENST00000376781 PPP6R1Q9UPN7 881 aa8.38□□□□□ -1.07
UBBP2-201ENST00000376781 ADRA2BP18089 450 aa8.33□□□□□ -1.08
UBBP2-201ENST00000376781 MYT1Q01538 1121 aa8.31□□□□□ -1.08
UBBP2-201ENST00000376781 PABPN1Q86U42 306 aaKnown RBP eCLIP8.31□□□□□ -1.08
UBBP2-201ENST00000376781 CECR2Q9BXF3 1484 aa8.21□□□□□ -1.09
UBBP2-201ENST00000376781 BAZ1AQ9NRL2 1556 aaPredicted RBP8.18□□□□□ -1.1
UBBP2-201ENST00000376781 SMARCA4P51532 1647 aa8.16□□□□□ -1.1
UBBP2-201ENST00000376781 MROH2BQ7Z745 1585 aa8.15□□□□□ -1.1
UBBP2-201ENST00000376781 EIF4G1Q04637 1599 aaKnown RBP8.14□□□□□ -1.11
UBBP2-201ENST00000376781 PPARGC1BQ86YN6 1023 aaKnown RBP8.14□□□□□ -1.11
UBBP2-201ENST00000376781 RSF1Q96T23 1441 aaPredicted RBP8.13□□□□□ -1.11
UBBP2-201ENST00000376781 PEG3Q9GZU2 1588 aa8.1□□□□□ -1.11
UBBP2-201ENST00000376781 SCAF1Q9H7N4 1312 aaKnown RBP8.09□□□□□ -1.11
UBBP2-201ENST00000376781 PIAS4Q8N2W9 510 aaPredicted RBP8.08□□□□□ -1.12
UBBP2-201ENST00000376781 ATAD2BQ9ULI0 1458 aa8.06□□□□□ -1.12
UBBP2-201ENST00000376781 WIZO95785 1651 aa8.06□□□□□ -1.12
UBBP2-201ENST00000376781 SMARCA2P51531 1590 aa8.05□□□□□ -1.12
UBBP2-201ENST00000376781 CC2D2AQ9P2K1 1620 aa8.05□□□□□ -1.12
UBBP2-201ENST00000376781 SUPT5HO00267 1087 aaKnown RBP8.04□□□□□ -1.12
UBBP2-201ENST00000376781 PCGF6Q9BYE7 350 aa8.04□□□□□ -1.12
UBBP2-201ENST00000376781 NCAPD3P42695 1498 aa8.03□□□□□ -1.12
UBBP2-201ENST00000376781 HMGXB3Q12766 1538 aa8.02□□□□□ -1.13
UBBP2-201ENST00000376781 TOP2AP11388 1531 aaKnown RBP8□□□□□ -1.13
UBBP2-201ENST00000376781 BAZ1BQ9UIG0 1483 aaKnown RBP8□□□□□ -1.13
UBBP2-201ENST00000376781 ZEB1P37275 1124 aaPredicted RBP7.96□□□□□ -1.14
UBBP2-201ENST00000376781 DNAJC5BQ9UF47 199 aa7.94□□□□□ -1.14
UBBP2-201ENST00000376781 TTBK1Q5TCY1 1321 aaPredicted RBP7.93□□□□□ -1.14
UBBP2-201ENST00000376781 CCDC88BA6NC98 1476 aa7.9□□□□□ -1.14
UBBP2-201ENST00000376781 TRIM26Q12899 539 aaPredicted RBP7.9□□□□□ -1.14
UBBP2-201ENST00000376781 ACIN1Q9UKV3 1341 aaKnown RBP7.87□□□□□ -1.15
UBBP2-201ENST00000376781 MSH5O43196 834 aa7.84□□□□□ -1.15
UBBP2-201ENST00000376781 CFTRP13569 1480 aa7.81□□□□□ -1.16
UBBP2-201ENST00000376781 CADPSQ9ULU8 1353 aa7.79□□□□□ -1.16
UBBP2-201ENST00000376781 LAMC3Q9Y6N6 1575 aa7.77□□□□□ -1.17
UBBP2-201ENST00000376781 NEUROD1Q13562 356 aa7.77□□□□□ -1.17
UBBP2-201ENST00000376781 PRDM2Q13029 1718 aa7.75□□□□□ -1.17
UBBP2-201ENST00000376781 NESP48681 1621 aa7.74□□□□□ -1.17
UBBP2-201ENST00000376781 GTF3C3Q9Y5Q9 886 aa7.71□□□□□ -1.18
UBBP2-201ENST00000376781 FANCD2Q9BXW9 1451 aa7.7□□□□□ -1.18
UBBP2-201ENST00000376781 PPP4R3CPQ6ZMV5 832 aa7.7□□□□□ -1.18
UBBP2-201ENST00000376781 PDS5BQ9NTI5 1447 aa7.69□□□□□ -1.18
UBBP2-201ENST00000376781 CENPBP07199 599 aaPredicted RBP7.69□□□□□ -1.18
UBBP2-201ENST00000376781 ABCC8Q09428 1581 aa7.67□□□□□ -1.18
UBBP2-201ENST00000376781 CEP164Q9UPV0 1460 aa7.67□□□□□ -1.18
UBBP2-201ENST00000376781 WRNQ14191 1432 aaPredicted RBP eCLIP7.66□□□□□ -1.18
UBBP2-201ENST00000376781 KIF21AQ7Z4S6 1674 aa7.66□□□□□ -1.18
UBBP2-201ENST00000376781 LOC105371045A0A1W2PR82 267 aa7.65□□□□□ -1.18
UBBP2-201ENST00000376781 SYNJ1O43426 1573 aa7.63□□□□□ -1.19
UBBP2-201ENST00000376781 CUX1P39880 1505 aa7.63□□□□□ -1.19
UBBP2-201ENST00000376781 KCNA4P22459 653 aa7.63□□□□□ -1.19
UBBP2-201ENST00000376781 TOP2BQ02880 1626 aa7.63□□□□□ -1.19
UBBP2-201ENST00000376781 BIVM-ERCC5R4GMW8 1640 aa7.63□□□□□ -1.19
UBBP2-201ENST00000376781 DNMBPQ6XZF7 1577 aa7.63□□□□□ -1.19
UBBP2-201ENST00000376781 URB2Q14146 1524 aaKnown RBP7.62□□□□□ -1.19
UBBP2-201ENST00000376781 ERCC6Q03468 1493 aa7.62□□□□□ -1.19
UBBP2-201ENST00000376781 MRC2Q9UBG0 1479 aa7.62□□□□□ -1.19
UBBP2-201ENST00000376781 THOC2Q8NI27 1593 aaKnown RBP7.61□□□□□ -1.19
UBBP2-201ENST00000376781 TOPBP1Q92547 1522 aa7.61□□□□□ -1.19
UBBP2-201ENST00000376781 BCL11AQ9H165 835 aa7.6□□□□□ -1.19
UBBP2-201ENST00000376781 WDR62O43379 1518 aa7.6□□□□□ -1.19
UBBP2-201ENST00000376781 TRIM41Q8WV44 630 aa7.59□□□□□ -1.19
UBBP2-201ENST00000376781 FGD5Q6ZNL6 1462 aa7.57□□□□□ -1.2
UBBP2-201ENST00000376781 POLA1P09884 1462 aaPredicted RBP7.56□□□□□ -1.2
UBBP2-201ENST00000376781 CLSPNQ9HAW4 1339 aa7.55□□□□□ -1.2
UBBP2-201ENST00000376781 MAPK8IP2Q13387 824 aaPredicted RBP7.55□□□□□ -1.2
UBBP2-201ENST00000376781 DIEXFQ68CQ4 756 aaKnown RBP7.55□□□□□ -1.2
UBBP2-201ENST00000376781 FAM9AQ8IZU1 332 aaPredicted RBP7.54□□□□□ -1.2
UBBP2-201ENST00000376781 CUX2O14529 1486 aa7.53□□□□□ -1.2
UBBP2-201ENST00000376781 ANP32EQ9BTT0 268 aa7.52□□□□□ -1.21
UBBP2-201ENST00000376781 WDR97A6NE52 1622 aa7.52□□□□□ -1.21
UBBP2-201ENST00000376781 TARBP1Q13395 1621 aaKnown RBP7.52□□□□□ -1.21
UBBP2-201ENST00000376781 ABCA10Q8WWZ4 1543 aa7.52□□□□□ -1.21
UBBP2-201ENST00000376781 RAD54L2Q9Y4B4 1467 aa7.51□□□□□ -1.21
UBBP2-201ENST00000376781 SOGA1O94964 1423 aa7.51□□□□□ -1.21
UBBP2-201ENST00000376781 IFT140Q96RY7 1462 aa7.5□□□□□ -1.21
UBBP2-201ENST00000376781 EEA1Q15075 1411 aa7.49□□□□□ -1.21
UBBP2-201ENST00000376781 RUSC2Q8N2Y8 1516 aa7.48□□□□□ -1.21
UBBP2-201ENST00000376781 KIF27Q86VH2 1401 aa7.48□□□□□ -1.21
UBBP2-201ENST00000376781 PRKCSHP14314 528 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms