RNA–Protein interactions for RNA: ENST00000375987.3

LINC01854-201, Transcript of long intergenic non-protein coding RNA 1854, humanhuman

TSL 2 BASIC

Gene LINC01854, Length 2,213 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01854-201ENST00000375987 NISCHQ9Y2I1 1504 aa20.67■□□□□ 0.9
LINC01854-201ENST00000375987 CCDC180Q9P1Z9 1646 aa18.1■□□□□ 0.49
LINC01854-201ENST00000375987 SHROOM4Q9ULL8 1493 aa17.46■□□□□ 0.38
LINC01854-201ENST00000375987 HRCP23327 699 aa17.44■□□□□ 0.38
LINC01854-201ENST00000375987 ZCCHC6Q5VYS8 1495 aaKnown RBP17.37■□□□□ 0.37
LINC01854-201ENST00000375987 SUPT5HO00267 1087 aaKnown RBP17.35■□□□□ 0.37
LINC01854-201ENST00000375987 MYO15BQ96JP2 1530 aa17.16■□□□□ 0.34
LINC01854-201ENST00000375987 DCAF1Q9Y4B6 1507 aa17.12■□□□□ 0.33
LINC01854-201ENST00000375987 ABCC9O60706 1549 aa17.09■□□□□ 0.33
LINC01854-201ENST00000375987 CHIC1Q5VXU3 224 aa17.09■□□□□ 0.33
LINC01854-201ENST00000375987 PCGF6Q9BYE7 350 aa17.08■□□□□ 0.32
LINC01854-201ENST00000375987 PPARGC1BQ86YN6 1023 aaKnown RBP16.93■□□□□ 0.3
LINC01854-201ENST00000375987 DCAF8L2P0C7V8 631 aa16.89■□□□□ 0.29
LINC01854-201ENST00000375987 NACADO15069 1562 aa16.83■□□□□ 0.28
LINC01854-201ENST00000375987 PELP1Q8IZL8 1130 aaKnown RBP16.74■□□□□ 0.27
LINC01854-201ENST00000375987 RB1CC1Q8TDY2 1594 aa16.68■□□□□ 0.26
LINC01854-201ENST00000375987 TRIM26Q12899 539 aaPredicted RBP16.67■□□□□ 0.26
LINC01854-201ENST00000375987 LOC105371045A0A1W2PR82 267 aa16.58■□□□□ 0.25
LINC01854-201ENST00000375987 SCRIBQ14160 1630 aa16.57■□□□□ 0.24
LINC01854-201ENST00000375987 ZEB1P37275 1124 aaPredicted RBP16.57■□□□□ 0.24
LINC01854-201ENST00000375987 UNC13AQ9UPW8 1703 aa16.48■□□□□ 0.23
LINC01854-201ENST00000375987 SCAF1Q9H7N4 1312 aaKnown RBP16.34■□□□□ 0.21
LINC01854-201ENST00000375987 BICRAQ9NZM4 1560 aa16.28■□□□□ 0.2
LINC01854-201ENST00000375987 TRIM41Q8WV44 630 aa16.15■□□□□ 0.18
LINC01854-201ENST00000375987 MYT1Q01538 1121 aa16.1■□□□□ 0.17
LINC01854-201ENST00000375987 CECR2Q9BXF3 1484 aa16.08■□□□□ 0.16
LINC01854-201ENST00000375987 RSF1Q96T23 1441 aaPredicted RBP16.07■□□□□ 0.16
LINC01854-201ENST00000375987 PABPN1Q86U42 306 aaKnown RBP eCLIP16.07■□□□□ 0.16
LINC01854-201ENST00000375987 ACIN1Q9UKV3 1341 aaKnown RBP16.05■□□□□ 0.16
LINC01854-201ENST00000375987 FAM9AQ8IZU1 332 aaPredicted RBP16■□□□□ 0.15
LINC01854-201ENST00000375987 MROH2BQ7Z745 1585 aa15.98■□□□□ 0.15
LINC01854-201ENST00000375987 CENPBP07199 599 aaPredicted RBP15.96■□□□□ 0.15
LINC01854-201ENST00000375987 NEUROD1Q13562 356 aa15.95■□□□□ 0.14
LINC01854-201ENST00000375987 BAZ1AQ9NRL2 1556 aaPredicted RBP15.94■□□□□ 0.14
LINC01854-201ENST00000375987 SMARCA4P51532 1647 aa15.92■□□□□ 0.14
LINC01854-201ENST00000375987 CCER1Q8TC90 406 aaPredicted RBP15.9■□□□□ 0.14
LINC01854-201ENST00000375987 GTF3C3Q9Y5Q9 886 aa15.87■□□□□ 0.13
LINC01854-201ENST00000375987 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.87■□□□□ 0.13
LINC01854-201ENST00000375987 DIEXFQ68CQ4 756 aaKnown RBP15.86■□□□□ 0.13
LINC01854-201ENST00000375987 EHMT2Q96KQ7 1210 aa15.85■□□□□ 0.13
LINC01854-201ENST00000375987 WIZO95785 1651 aa15.85■□□□□ 0.13
LINC01854-201ENST00000375987 PEG3Q9GZU2 1588 aa15.77■□□□□ 0.11
LINC01854-201ENST00000375987 EIF4G1Q04637 1599 aaKnown RBP15.74■□□□□ 0.11
LINC01854-201ENST00000375987 WRNQ14191 1432 aaPredicted RBP eCLIP15.67■□□□□ 0.1
LINC01854-201ENST00000375987 TOP2AP11388 1531 aaKnown RBP15.66■□□□□ 0.1
LINC01854-201ENST00000375987 ATAD2BQ9ULI0 1458 aa15.66■□□□□ 0.1
LINC01854-201ENST00000375987 SMARCA2P51531 1590 aa15.62■□□□□ 0.09
LINC01854-201ENST00000375987 ZNF316A6NFI3 1004 aaPredicted RBP15.61■□□□□ 0.09
LINC01854-201ENST00000375987 CEP162Q5TB80 1403 aa15.55■□□□□ 0.08
LINC01854-201ENST00000375987 NCAPD3P42695 1498 aa15.54■□□□□ 0.08
LINC01854-201ENST00000375987 HMGXB3Q12766 1538 aa15.52■□□□□ 0.08
LINC01854-201ENST00000375987 CC2D2AQ9P2K1 1620 aa15.52■□□□□ 0.08
LINC01854-201ENST00000375987 BAZ1BQ9UIG0 1483 aaKnown RBP15.52■□□□□ 0.07
LINC01854-201ENST00000375987 YTHDC1Q96MU7 727 aaKnown RBP15.5■□□□□ 0.07
LINC01854-201ENST00000375987 CCDC88BA6NC98 1476 aa15.49■□□□□ 0.07
LINC01854-201ENST00000375987 TTBK1Q5TCY1 1321 aaPredicted RBP15.48■□□□□ 0.07
LINC01854-201ENST00000375987 TNIKQ9UKE5 1360 aa15.47■□□□□ 0.07
LINC01854-201ENST00000375987 SLC24A1O60721 1099 aa15.42■□□□□ 0.06
LINC01854-201ENST00000375987 EEA1Q15075 1411 aa15.42■□□□□ 0.06
LINC01854-201ENST00000375987 MIER1Q8N108 512 aa15.41■□□□□ 0.06
LINC01854-201ENST00000375987 ABCC8Q09428 1581 aa15.4■□□□□ 0.06
LINC01854-201ENST00000375987 CLSPNQ9HAW4 1339 aa15.36■□□□□ 0.05
LINC01854-201ENST00000375987 SOGA1O94964 1423 aa15.34■□□□□ 0.05
LINC01854-201ENST00000375987 GOLGA3Q08378 1498 aa15.33■□□□□ 0.04
LINC01854-201ENST00000375987 UBTFP17480 764 aaKnown RBP15.32■□□□□ 0.04
LINC01854-201ENST00000375987 CSRNP3Q8WYN3 585 aa15.31■□□□□ 0.04
LINC01854-201ENST00000375987 HNRNPUL2Q1KMD3 747 aaKnown RBP15.25■□□□□ 0.03
LINC01854-201ENST00000375987 RUSC2Q8N2Y8 1516 aa15.22■□□□□ 0.03
LINC01854-201ENST00000375987 DNAJC5BQ9UF47 199 aa15.2■□□□□ 0.02
LINC01854-201ENST00000375987 CEP164Q9UPV0 1460 aa15.19■□□□□ 0.02
LINC01854-201ENST00000375987 SUPT16HQ9Y5B9 1047 aaKnown RBP15.17■□□□□ 0.02
LINC01854-201ENST00000375987 CFTRP13569 1480 aa15.17■□□□□ 0.02
LINC01854-201ENST00000375987 KIF21BO75037 1637 aa15.17■□□□□ 0.02
LINC01854-201ENST00000375987 PRDM2Q13029 1718 aa15.16■□□□□ 0.02
LINC01854-201ENST00000375987 VPS8Q8N3P4 1428 aa15.16■□□□□ 0.02
LINC01854-201ENST00000375987 CLIP1P30622 1438 aa15.15■□□□□ 0.02
LINC01854-201ENST00000375987 APLP2Q06481 763 aa15.13■□□□□ 0.01
LINC01854-201ENST00000375987 CADPSQ9ULU8 1353 aa15.1■□□□□ 0.01
LINC01854-201ENST00000375987 ANP32EQ9BTT0 268 aa15.07■□□□□ 0
LINC01854-201ENST00000375987 TSHZ2Q9NRE2 1034 aa15.05■□□□□ 0
LINC01854-201ENST00000375987 DHX57Q6P158 1386 aaKnown RBP15.04■□□□□ -0
LINC01854-201ENST00000375987 NESP48681 1621 aa15.03■□□□□ -0
LINC01854-201ENST00000375987 SYNJ1O43426 1573 aa15.02■□□□□ -0
LINC01854-201ENST00000375987 LAMC3Q9Y6N6 1575 aa15.02□□□□□ -0.01
LINC01854-201ENST00000375987 BIVM-ERCC5R4GMW8 1640 aa14.97□□□□□ -0.01
LINC01854-201ENST00000375987 RAPGEF2Q9Y4G8 1499 aa14.96□□□□□ -0.01
LINC01854-201ENST00000375987 TOP2BQ02880 1626 aa14.96□□□□□ -0.01
LINC01854-201ENST00000375987 CUX1P39880 1505 aa14.94□□□□□ -0.02
LINC01854-201ENST00000375987 FANCD2Q9BXW9 1451 aa14.93□□□□□ -0.02
LINC01854-201ENST00000375987 BCL11AQ9H165 835 aa14.89□□□□□ -0.03
LINC01854-201ENST00000375987 KIF21AQ7Z4S6 1674 aa14.89□□□□□ -0.03
LINC01854-201ENST00000375987 CUX2O14529 1486 aa14.87□□□□□ -0.03
LINC01854-201ENST00000375987 RRBP1Q9P2E9 1410 aaKnown RBP14.87□□□□□ -0.03
LINC01854-201ENST00000375987 RANGAP1P46060 587 aaPredicted RBP14.85□□□□□ -0.03
LINC01854-201ENST00000375987 ERICH3Q5RHP9 1530 aa14.85□□□□□ -0.03
LINC01854-201ENST00000375987 PDS5BQ9NTI5 1447 aa14.83□□□□□ -0.03
LINC01854-201ENST00000375987 ARAP1Q96P48 1450 aa14.83□□□□□ -0.04
LINC01854-201ENST00000375987 DNMBPQ6XZF7 1577 aa14.82□□□□□ -0.04
LINC01854-201ENST00000375987 URB2Q14146 1524 aaKnown RBP14.79□□□□□ -0.04
LINC01854-201ENST00000375987 FKBP8Q14318 412 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 187.4 ms