RNA–Protein interactions for RNA: ENST00000367050.8

CR1-202, Transcript of complement C3b/C4b receptor 1 (Knops blood group), humanhuman

TSL 1 (best)

Gene CR1, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR1-202ENST00000367050 NISCHQ9Y2I1 1504 aa35.4■■■■□ 3.26
CR1-202ENST00000367050 SHROOM4Q9ULL8 1493 aa30.37■■■□□ 2.45
CR1-202ENST00000367050 CCDC180Q9P1Z9 1646 aa30.01■■■□□ 2.39
CR1-202ENST00000367050 ZCCHC6Q5VYS8 1495 aaKnown RBP29.92■■■□□ 2.38
CR1-202ENST00000367050 SUPT5HO00267 1087 aaKnown RBP29.71■■■□□ 2.35
CR1-202ENST00000367050 DCAF8L2P0C7V8 631 aa29.57■■■□□ 2.32
CR1-202ENST00000367050 DCAF1Q9Y4B6 1507 aa28.91■■■□□ 2.22
CR1-202ENST00000367050 CHIC1Q5VXU3 224 aa28.79■■■□□ 2.2
CR1-202ENST00000367050 MYO15BQ96JP2 1530 aa28.75■■■□□ 2.19
CR1-202ENST00000367050 SCRIBQ14160 1630 aa28.32■■■□□ 2.12
CR1-202ENST00000367050 ABCC9O60706 1549 aa28.22■■■□□ 2.11
CR1-202ENST00000367050 LOC105371045A0A1W2PR82 267 aa28.05■■■□□ 2.08
CR1-202ENST00000367050 RSF1Q96T23 1441 aaPredicted RBP28.05■■■□□ 2.08
CR1-202ENST00000367050 PCGF6Q9BYE7 350 aa27.89■■■□□ 2.06
CR1-202ENST00000367050 RB1CC1Q8TDY2 1594 aa27.79■■■□□ 2.04
CR1-202ENST00000367050 NACADO15069 1562 aa27.78■■■□□ 2.04
CR1-202ENST00000367050 HRCP23327 699 aa27.75■■■□□ 2.03
CR1-202ENST00000367050 CECR2Q9BXF3 1484 aa27.74■■■□□ 2.03
CR1-202ENST00000367050 MROH2BQ7Z745 1585 aa27.6■■■□□ 2.01
CR1-202ENST00000367050 TRIM41Q8WV44 630 aa27.58■■■□□ 2.01
CR1-202ENST00000367050 FAM9AQ8IZU1 332 aaPredicted RBP27.5■■□□□ 1.99
CR1-202ENST00000367050 WIZO95785 1651 aa27.46■■□□□ 1.99
CR1-202ENST00000367050 PPARGC1BQ86YN6 1023 aaKnown RBP27.39■■□□□ 1.98
CR1-202ENST00000367050 EHMT2Q96KQ7 1210 aa27.38■■□□□ 1.97
CR1-202ENST00000367050 TRIM26Q12899 539 aaPredicted RBP27.24■■□□□ 1.95
CR1-202ENST00000367050 BAZ1AQ9NRL2 1556 aaPredicted RBP27.17■■□□□ 1.94
CR1-202ENST00000367050 UNC13AQ9UPW8 1703 aa27.08■■□□□ 1.93
CR1-202ENST00000367050 EIF4G1Q04637 1599 aaKnown RBP27■■□□□ 1.91
CR1-202ENST00000367050 SMARCA4P51532 1647 aa26.98■■□□□ 1.91
CR1-202ENST00000367050 PABPN1Q86U42 306 aaKnown RBP eCLIP26.92■■□□□ 1.9
CR1-202ENST00000367050 TOP2AP11388 1531 aaKnown RBP26.92■■□□□ 1.9
CR1-202ENST00000367050 CCDC88BA6NC98 1476 aa26.89■■□□□ 1.89
CR1-202ENST00000367050 ABCC8Q09428 1581 aa26.87■■□□□ 1.89
CR1-202ENST00000367050 SMARCA2P51531 1590 aa26.82■■□□□ 1.88
CR1-202ENST00000367050 BICRAQ9NZM4 1560 aa26.74■■□□□ 1.87
CR1-202ENST00000367050 SOGA1O94964 1423 aa26.6■■□□□ 1.85
CR1-202ENST00000367050 RUSC2Q8N2Y8 1516 aa26.51■■□□□ 1.83
CR1-202ENST00000367050 ZEB1P37275 1124 aaPredicted RBP26.49■■□□□ 1.83
CR1-202ENST00000367050 TTBK1Q5TCY1 1321 aaPredicted RBP26.45■■□□□ 1.83
CR1-202ENST00000367050 PEG3Q9GZU2 1588 aa26.38■■□□□ 1.81
CR1-202ENST00000367050 CEP162Q5TB80 1403 aa26.38■■□□□ 1.81
CR1-202ENST00000367050 CSRNP3Q8WYN3 585 aa26.36■■□□□ 1.81
CR1-202ENST00000367050 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.32■■□□□ 1.8
CR1-202ENST00000367050 WRNQ14191 1432 aaPredicted RBP eCLIP26.32■■□□□ 1.8
CR1-202ENST00000367050 ATAD2BQ9ULI0 1458 aa26.31■■□□□ 1.8
CR1-202ENST00000367050 UBTFP17480 764 aaKnown RBP26.31■■□□□ 1.8
CR1-202ENST00000367050 TNIKQ9UKE5 1360 aa26.27■■□□□ 1.8
CR1-202ENST00000367050 SYNJ1O43426 1573 aa26.24■■□□□ 1.79
CR1-202ENST00000367050 BAZ1BQ9UIG0 1483 aaKnown RBP26.23■■□□□ 1.79
CR1-202ENST00000367050 EEA1Q15075 1411 aa26.22■■□□□ 1.79
CR1-202ENST00000367050 CCER1Q8TC90 406 aaPredicted RBP26.15■■□□□ 1.78
CR1-202ENST00000367050 GOLGA3Q08378 1498 aa26.14■■□□□ 1.77
CR1-202ENST00000367050 CEP164Q9UPV0 1460 aa25.98■■□□□ 1.75
CR1-202ENST00000367050 RANGAP1P46060 587 aaPredicted RBP25.96■■□□□ 1.75
CR1-202ENST00000367050 KIF21BO75037 1637 aa25.93■■□□□ 1.74
CR1-202ENST00000367050 RAPGEF2Q9Y4G8 1499 aa25.92■■□□□ 1.74
CR1-202ENST00000367050 CLIP1P30622 1438 aa25.89■■□□□ 1.74
CR1-202ENST00000367050 TOP2BQ02880 1626 aa25.84■■□□□ 1.73
CR1-202ENST00000367050 NCAPD3P42695 1498 aa25.75■■□□□ 1.71
CR1-202ENST00000367050 HNRNPUL2Q1KMD3 747 aaKnown RBP25.75■■□□□ 1.71
CR1-202ENST00000367050 VPS8Q8N3P4 1428 aa25.74■■□□□ 1.71
CR1-202ENST00000367050 BIVM-ERCC5R4GMW8 1640 aa25.73■■□□□ 1.71
CR1-202ENST00000367050 HMGXB3Q12766 1538 aa25.71■■□□□ 1.71
CR1-202ENST00000367050 CUX1P39880 1505 aa25.68■■□□□ 1.7
CR1-202ENST00000367050 SCAF1Q9H7N4 1312 aaKnown RBP25.61■■□□□ 1.69
CR1-202ENST00000367050 APLP2Q06481 763 aa25.6■■□□□ 1.69
CR1-202ENST00000367050 PRXQ9BXM0 1461 aa25.59■■□□□ 1.69
CR1-202ENST00000367050 DIEXFQ68CQ4 756 aaKnown RBP25.59■■□□□ 1.69
CR1-202ENST00000367050 CFTRP13569 1480 aa25.56■■□□□ 1.68
CR1-202ENST00000367050 ERICH3Q5RHP9 1530 aa25.51■■□□□ 1.67
CR1-202ENST00000367050 ARAP1Q96P48 1450 aa25.5■■□□□ 1.67
CR1-202ENST00000367050 KIF27Q86VH2 1401 aa25.47■■□□□ 1.67
CR1-202ENST00000367050 KANK4Q5T7N3 995 aaPredicted RBP25.45■■□□□ 1.66
CR1-202ENST00000367050 ZNF316A6NFI3 1004 aaPredicted RBP25.39■■□□□ 1.65
CR1-202ENST00000367050 NEUROD1Q13562 356 aa25.38■■□□□ 1.65
CR1-202ENST00000367050 CUX2O14529 1486 aa25.31■■□□□ 1.64
CR1-202ENST00000367050 ACIN1Q9UKV3 1341 aaKnown RBP25.31■■□□□ 1.64
CR1-202ENST00000367050 CADPSQ9ULU8 1353 aa25.3■■□□□ 1.64
CR1-202ENST00000367050 ARHGAP35Q9NRY4 1499 aa25.29■■□□□ 1.64
CR1-202ENST00000367050 PRDM2Q13029 1718 aa25.28■■□□□ 1.64
CR1-202ENST00000367050 IGF1RP08069 1367 aa25.27■■□□□ 1.64
CR1-202ENST00000367050 FGD5Q6ZNL6 1462 aa25.22■■□□□ 1.63
CR1-202ENST00000367050 CC2D2AQ9P2K1 1620 aa25.22■■□□□ 1.63
CR1-202ENST00000367050 DHX57Q6P158 1386 aaKnown RBP25.15■■□□□ 1.62
CR1-202ENST00000367050 CARMIL1Q5VZK9 1371 aa25.14■■□□□ 1.62
CR1-202ENST00000367050 ITGAEP38570 1179 aa25.12■■□□□ 1.61
CR1-202ENST00000367050 MIER1Q8N108 512 aa25.12■■□□□ 1.61
CR1-202ENST00000367050 RRBP1Q9P2E9 1410 aaKnown RBP25.11■■□□□ 1.61
CR1-202ENST00000367050 YTHDC1Q96MU7 727 aaKnown RBP25.1■■□□□ 1.61
CR1-202ENST00000367050 FANCD2Q9BXW9 1451 aa25.08■■□□□ 1.61
CR1-202ENST00000367050 CENPBP07199 599 aaPredicted RBP25.08■■□□□ 1.61
CR1-202ENST00000367050 GTF3C3Q9Y5Q9 886 aa25.08■■□□□ 1.6
CR1-202ENST00000367050 P3H3Q8IVL6 736 aa25.06■■□□□ 1.6
CR1-202ENST00000367050 CCNB3Q8WWL7 1395 aa25.05■■□□□ 1.6
CR1-202ENST00000367050 NESP48681 1621 aa25.05■■□□□ 1.6
CR1-202ENST00000367050 RAD54L2Q9Y4B4 1467 aa25.04■■□□□ 1.6
CR1-202ENST00000367050 TIAM1Q13009 1591 aa24.96■■□□□ 1.59
CR1-202ENST00000367050 CLSPNQ9HAW4 1339 aa24.94■■□□□ 1.58
CR1-202ENST00000367050 ATP1B4Q9UN42 357 aaPredicted RBP24.93■■□□□ 1.58
CR1-202ENST00000367050 POLA1P09884 1462 aaPredicted RBP24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms