RNA–Protein interactions for RNA: ENST00000366808.5

LIN9-203, Transcript of lin-9 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN9, Length 3,186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN9-203ENST00000366808 NISCHQ9Y2I1 1504 aa30.5■■■□□ 2.47
LIN9-203ENST00000366808 SHROOM4Q9ULL8 1493 aa26.18■■□□□ 1.78
LIN9-203ENST00000366808 DCAF8L2P0C7V8 631 aa26.03■■□□□ 1.76
LIN9-203ENST00000366808 CCDC180Q9P1Z9 1646 aa25.95■■□□□ 1.74
LIN9-203ENST00000366808 ZCCHC6Q5VYS8 1495 aaKnown RBP25.66■■□□□ 1.7
LIN9-203ENST00000366808 SUPT5HO00267 1087 aaKnown RBP25.44■■□□□ 1.66
LIN9-203ENST00000366808 ABCC9O60706 1549 aa24.92■■□□□ 1.58
LIN9-203ENST00000366808 DCAF1Q9Y4B6 1507 aa24.78■■□□□ 1.56
LIN9-203ENST00000366808 SCRIBQ14160 1630 aa24.62■■□□□ 1.53
LIN9-203ENST00000366808 PELP1Q8IZL8 1130 aaKnown RBP24.46■■□□□ 1.51
LIN9-203ENST00000366808 PPARGC1BQ86YN6 1023 aaKnown RBP24.43■■□□□ 1.5
LIN9-203ENST00000366808 HRCP23327 699 aa24.32■■□□□ 1.48
LIN9-203ENST00000366808 CHIC1Q5VXU3 224 aa24.27■■□□□ 1.48
LIN9-203ENST00000366808 MYO15BQ96JP2 1530 aa24.18■■□□□ 1.46
LIN9-203ENST00000366808 NACADO15069 1562 aa24.18■■□□□ 1.46
LIN9-203ENST00000366808 RSF1Q96T23 1441 aaPredicted RBP24.04■■□□□ 1.44
LIN9-203ENST00000366808 CECR2Q9BXF3 1484 aa24.01■■□□□ 1.43
LIN9-203ENST00000366808 RB1CC1Q8TDY2 1594 aa23.96■■□□□ 1.43
LIN9-203ENST00000366808 PCGF6Q9BYE7 350 aa23.89■■□□□ 1.42
LIN9-203ENST00000366808 PABPN1Q86U42 306 aaKnown RBP eCLIP23.88■■□□□ 1.41
LIN9-203ENST00000366808 MROH2BQ7Z745 1585 aa23.8■■□□□ 1.4
LIN9-203ENST00000366808 SCAF1Q9H7N4 1312 aaKnown RBP23.76■■□□□ 1.39
LIN9-203ENST00000366808 LOC105371045A0A1W2PR82 267 aa23.75■■□□□ 1.39
LIN9-203ENST00000366808 WIZO95785 1651 aa23.67■■□□□ 1.38
LIN9-203ENST00000366808 EHMT2Q96KQ7 1210 aa23.64■■□□□ 1.38
LIN9-203ENST00000366808 FAM9AQ8IZU1 332 aaPredicted RBP23.62■■□□□ 1.37
LIN9-203ENST00000366808 UNC13AQ9UPW8 1703 aa23.62■■□□□ 1.37
LIN9-203ENST00000366808 MYT1Q01538 1121 aa23.6■■□□□ 1.37
LIN9-203ENST00000366808 TRIM41Q8WV44 630 aa23.57■■□□□ 1.36
LIN9-203ENST00000366808 BAZ1AQ9NRL2 1556 aaPredicted RBP23.43■■□□□ 1.34
LIN9-203ENST00000366808 BICRAQ9NZM4 1560 aa23.35■■□□□ 1.33
LIN9-203ENST00000366808 SMARCA4P51532 1647 aa23.32■■□□□ 1.32
LIN9-203ENST00000366808 CCDC88BA6NC98 1476 aa23.16■■□□□ 1.3
LIN9-203ENST00000366808 TOP2AP11388 1531 aaKnown RBP23.13■■□□□ 1.29
LIN9-203ENST00000366808 ABCC8Q09428 1581 aa23.06■■□□□ 1.28
LIN9-203ENST00000366808 SMARCA2P51531 1590 aa23.05■■□□□ 1.28
LIN9-203ENST00000366808 EIF4G1Q04637 1599 aaKnown RBP22.91■■□□□ 1.26
LIN9-203ENST00000366808 ATAD2BQ9ULI0 1458 aa22.89■■□□□ 1.25
LIN9-203ENST00000366808 GTF3C3Q9Y5Q9 886 aa22.88■■□□□ 1.25
LIN9-203ENST00000366808 NEUROD1Q13562 356 aa22.85■■□□□ 1.25
LIN9-203ENST00000366808 BAZ1BQ9UIG0 1483 aaKnown RBP22.84■■□□□ 1.25
LIN9-203ENST00000366808 SOGA1O94964 1423 aa22.75■■□□□ 1.23
LIN9-203ENST00000366808 ACIN1Q9UKV3 1341 aaKnown RBP22.73■■□□□ 1.23
LIN9-203ENST00000366808 PEG3Q9GZU2 1588 aa22.72■■□□□ 1.23
LIN9-203ENST00000366808 TTBK1Q5TCY1 1321 aaPredicted RBP22.7■■□□□ 1.22
LIN9-203ENST00000366808 RUSC2Q8N2Y8 1516 aa22.7■■□□□ 1.22
LIN9-203ENST00000366808 BCL11AQ9H165 835 aa22.7■■□□□ 1.22
LIN9-203ENST00000366808 TRIM26Q12899 539 aaPredicted RBP22.66■■□□□ 1.22
LIN9-203ENST00000366808 WRNQ14191 1432 aaPredicted RBP eCLIP22.62■■□□□ 1.21
LIN9-203ENST00000366808 UBTFP17480 764 aaKnown RBP22.6■■□□□ 1.21
LIN9-203ENST00000366808 RANGAP1P46060 587 aaPredicted RBP22.56■■□□□ 1.2
LIN9-203ENST00000366808 CSRNP3Q8WYN3 585 aa22.55■■□□□ 1.2
LIN9-203ENST00000366808 SYNJ1O43426 1573 aa22.52■■□□□ 1.19
LIN9-203ENST00000366808 PRKCSHP14314 528 aaPredicted RBP22.47■■□□□ 1.19
LIN9-203ENST00000366808 NCAPD3P42695 1498 aa22.43■■□□□ 1.18
LIN9-203ENST00000366808 CENPBP07199 599 aaPredicted RBP22.36■■□□□ 1.17
LIN9-203ENST00000366808 CEP162Q5TB80 1403 aa22.36■■□□□ 1.17
LIN9-203ENST00000366808 YTHDC1Q96MU7 727 aaKnown RBP22.33■■□□□ 1.16
LIN9-203ENST00000366808 HMGXB3Q12766 1538 aa22.32■■□□□ 1.16
LIN9-203ENST00000366808 CC2D2AQ9P2K1 1620 aa22.25■■□□□ 1.15
LIN9-203ENST00000366808 EEA1Q15075 1411 aa22.25■■□□□ 1.15
LIN9-203ENST00000366808 ZEB1P37275 1124 aaPredicted RBP22.25■■□□□ 1.15
LIN9-203ENST00000366808 TNIKQ9UKE5 1360 aa22.25■■□□□ 1.15
LIN9-203ENST00000366808 GOLGA3Q08378 1498 aa22.22■■□□□ 1.15
LIN9-203ENST00000366808 DNAJC5BQ9UF47 199 aa22.18■■□□□ 1.14
LIN9-203ENST00000366808 RAPGEF2Q9Y4G8 1499 aa22.17■■□□□ 1.14
LIN9-203ENST00000366808 CUX1P39880 1505 aa22.16■■□□□ 1.14
LIN9-203ENST00000366808 CFTRP13569 1480 aa22.16■■□□□ 1.14
LIN9-203ENST00000366808 TOP2BQ02880 1626 aa22.16■■□□□ 1.14
LIN9-203ENST00000366808 CEP164Q9UPV0 1460 aa22.13■■□□□ 1.13
LIN9-203ENST00000366808 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.11■■□□□ 1.13
LIN9-203ENST00000366808 CADPSQ9ULU8 1353 aa22.08■■□□□ 1.13
LIN9-203ENST00000366808 CLIP1P30622 1438 aa22.05■■□□□ 1.12
LIN9-203ENST00000366808 NESP48681 1621 aa22.04■■□□□ 1.12
LIN9-203ENST00000366808 BIVM-ERCC5R4GMW8 1640 aa22.03■■□□□ 1.12
LIN9-203ENST00000366808 DIEXFQ68CQ4 756 aaKnown RBP21.99■■□□□ 1.11
LIN9-203ENST00000366808 KIF21BO75037 1637 aa21.99■■□□□ 1.11
LIN9-203ENST00000366808 CCER1Q8TC90 406 aaPredicted RBP21.94■■□□□ 1.1
LIN9-203ENST00000366808 KIF27Q86VH2 1401 aa21.94■■□□□ 1.1
LIN9-203ENST00000366808 CUX2O14529 1486 aa21.92■■□□□ 1.1
LIN9-203ENST00000366808 APLP2Q06481 763 aa21.91■■□□□ 1.1
LIN9-203ENST00000366808 ANP32EQ9BTT0 268 aa21.91■■□□□ 1.1
LIN9-203ENST00000366808 FANCD2Q9BXW9 1451 aa21.9■■□□□ 1.1
LIN9-203ENST00000366808 HNRNPUL2Q1KMD3 747 aaKnown RBP21.89■■□□□ 1.1
LIN9-203ENST00000366808 FGD5Q6ZNL6 1462 aa21.88■■□□□ 1.09
LIN9-203ENST00000366808 PRXQ9BXM0 1461 aa21.84■■□□□ 1.09
LIN9-203ENST00000366808 RAD54L2Q9Y4B4 1467 aa21.82■■□□□ 1.08
LIN9-203ENST00000366808 VPS8Q8N3P4 1428 aa21.8■■□□□ 1.08
LIN9-203ENST00000366808 P3H3Q8IVL6 736 aa21.79■■□□□ 1.08
LIN9-203ENST00000366808 PRDM2Q13029 1718 aa21.79■■□□□ 1.08
LIN9-203ENST00000366808 IGF1RP08069 1367 aa21.78■■□□□ 1.08
LIN9-203ENST00000366808 KANK4Q5T7N3 995 aaPredicted RBP21.72■■□□□ 1.07
LIN9-203ENST00000366808 CARMIL1Q5VZK9 1371 aa21.71■■□□□ 1.07
LIN9-203ENST00000366808 ATP1B4Q9UN42 357 aaPredicted RBP21.71■■□□□ 1.07
LIN9-203ENST00000366808 ERICH3Q5RHP9 1530 aa21.7■■□□□ 1.06
LIN9-203ENST00000366808 ARAP1Q96P48 1450 aa21.7■■□□□ 1.06
LIN9-203ENST00000366808 TOPBP1Q92547 1522 aa21.67■■□□□ 1.06
LIN9-203ENST00000366808 POLA1P09884 1462 aaPredicted RBP21.66■■□□□ 1.06
LIN9-203ENST00000366808 TDRD9Q8NDG6 1382 aaKnown RBP21.64■■□□□ 1.06
LIN9-203ENST00000366808 URB2Q14146 1524 aaKnown RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 224.1 ms