RNA–Protein interactions for RNA: ENST00000360338.3

ZNF460-201, Transcript of zinc finger protein 460, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF460, Length 3,350 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF460-201ENST00000360338 NISCHQ9Y2I1 1504 aa23.16■■□□□ 1.3
ZNF460-201ENST00000360338 SHROOM4Q9ULL8 1493 aa20.62■□□□□ 0.89
ZNF460-201ENST00000360338 DCAF8L2P0C7V8 631 aa20.59■□□□□ 0.89
ZNF460-201ENST00000360338 SUPT5HO00267 1087 aaKnown RBP20.17■□□□□ 0.82
ZNF460-201ENST00000360338 ZCCHC6Q5VYS8 1495 aaKnown RBP19.44■□□□□ 0.7
ZNF460-201ENST00000360338 CCDC180Q9P1Z9 1646 aa19.32■□□□□ 0.68
ZNF460-201ENST00000360338 ABCC9O60706 1549 aa19.1■□□□□ 0.65
ZNF460-201ENST00000360338 EHMT2Q96KQ7 1210 aa19.03■□□□□ 0.64
ZNF460-201ENST00000360338 CHIC1Q5VXU3 224 aa19.01■□□□□ 0.63
ZNF460-201ENST00000360338 LOC105371045A0A1W2PR82 267 aa18.82■□□□□ 0.6
ZNF460-201ENST00000360338 FAM9AQ8IZU1 332 aaPredicted RBP18.82■□□□□ 0.6
ZNF460-201ENST00000360338 SCRIBQ14160 1630 aa18.81■□□□□ 0.6
ZNF460-201ENST00000360338 MYO15BQ96JP2 1530 aa18.77■□□□□ 0.59
ZNF460-201ENST00000360338 PCGF6Q9BYE7 350 aa18.61■□□□□ 0.57
ZNF460-201ENST00000360338 PABPN1Q86U42 306 aaKnown RBP eCLIP18.55■□□□□ 0.56
ZNF460-201ENST00000360338 DCAF1Q9Y4B6 1507 aa18.54■□□□□ 0.56
ZNF460-201ENST00000360338 TRIM41Q8WV44 630 aa18.53■□□□□ 0.56
ZNF460-201ENST00000360338 RSF1Q96T23 1441 aaPredicted RBP18.44■□□□□ 0.54
ZNF460-201ENST00000360338 CECR2Q9BXF3 1484 aa18.42■□□□□ 0.54
ZNF460-201ENST00000360338 PPARGC1BQ86YN6 1023 aaKnown RBP18.35■□□□□ 0.53
ZNF460-201ENST00000360338 TTBK1Q5TCY1 1321 aaPredicted RBP18.27■□□□□ 0.52
ZNF460-201ENST00000360338 HRCP23327 699 aa18.24■□□□□ 0.51
ZNF460-201ENST00000360338 RB1CC1Q8TDY2 1594 aa18.21■□□□□ 0.51
ZNF460-201ENST00000360338 MROH2BQ7Z745 1585 aa18.18■□□□□ 0.5
ZNF460-201ENST00000360338 NACADO15069 1562 aa18.16■□□□□ 0.5
ZNF460-201ENST00000360338 WIZO95785 1651 aa18.04■□□□□ 0.48
ZNF460-201ENST00000360338 RANGAP1P46060 587 aaPredicted RBP18.04■□□□□ 0.48
ZNF460-201ENST00000360338 TRIM26Q12899 539 aaPredicted RBP17.88■□□□□ 0.45
ZNF460-201ENST00000360338 UBTFP17480 764 aaKnown RBP17.85■□□□□ 0.45
ZNF460-201ENST00000360338 ABCC8Q09428 1581 aa17.77■□□□□ 0.44
ZNF460-201ENST00000360338 BAZ1AQ9NRL2 1556 aaPredicted RBP17.76■□□□□ 0.43
ZNF460-201ENST00000360338 CCDC88BA6NC98 1476 aa17.73■□□□□ 0.43
ZNF460-201ENST00000360338 SOGA1O94964 1423 aa17.63■□□□□ 0.41
ZNF460-201ENST00000360338 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.63■□□□□ 0.41
ZNF460-201ENST00000360338 SMARCA4P51532 1647 aa17.62■□□□□ 0.41
ZNF460-201ENST00000360338 UNC13AQ9UPW8 1703 aa17.58■□□□□ 0.4
ZNF460-201ENST00000360338 RUSC2Q8N2Y8 1516 aa17.56■□□□□ 0.4
ZNF460-201ENST00000360338 CSRNP3Q8WYN3 585 aa17.56■□□□□ 0.4
ZNF460-201ENST00000360338 TOP2AP11388 1531 aaKnown RBP17.53■□□□□ 0.4
ZNF460-201ENST00000360338 BICRAQ9NZM4 1560 aa17.52■□□□□ 0.4
ZNF460-201ENST00000360338 CCER1Q8TC90 406 aaPredicted RBP17.51■□□□□ 0.39
ZNF460-201ENST00000360338 SMARCA2P51531 1590 aa17.49■□□□□ 0.39
ZNF460-201ENST00000360338 BAZ1BQ9UIG0 1483 aaKnown RBP17.44■□□□□ 0.38
ZNF460-201ENST00000360338 HNRNPUL2Q1KMD3 747 aaKnown RBP17.42■□□□□ 0.38
ZNF460-201ENST00000360338 WRNQ14191 1432 aaPredicted RBP eCLIP17.41■□□□□ 0.38
ZNF460-201ENST00000360338 ATAD2BQ9ULI0 1458 aa17.39■□□□□ 0.37
ZNF460-201ENST00000360338 CEP162Q5TB80 1403 aa17.35■□□□□ 0.37
ZNF460-201ENST00000360338 APLP2Q06481 763 aa17.34■□□□□ 0.37
ZNF460-201ENST00000360338 ATP1B4Q9UN42 357 aaPredicted RBP17.28■□□□□ 0.36
ZNF460-201ENST00000360338 ZEB1P37275 1124 aaPredicted RBP17.25■□□□□ 0.35
ZNF460-201ENST00000360338 EIF4G1Q04637 1599 aaKnown RBP17.24■□□□□ 0.35
ZNF460-201ENST00000360338 ITGAEP38570 1179 aa17.23■□□□□ 0.35
ZNF460-201ENST00000360338 P3H3Q8IVL6 736 aa17.19■□□□□ 0.34
ZNF460-201ENST00000360338 SYNJ1O43426 1573 aa17.17■□□□□ 0.34
ZNF460-201ENST00000360338 TNIKQ9UKE5 1360 aa17.17■□□□□ 0.34
ZNF460-201ENST00000360338 GOLGA3Q08378 1498 aa17.13■□□□□ 0.33
ZNF460-201ENST00000360338 CLIP1P30622 1438 aa17.12■□□□□ 0.33
ZNF460-201ENST00000360338 SCAF1Q9H7N4 1312 aaKnown RBP17.12■□□□□ 0.33
ZNF460-201ENST00000360338 RAPGEF2Q9Y4G8 1499 aa17.12■□□□□ 0.33
ZNF460-201ENST00000360338 DNAJC5BQ9UF47 199 aa17.11■□□□□ 0.33
ZNF460-201ENST00000360338 EEA1Q15075 1411 aa17.03■□□□□ 0.32
ZNF460-201ENST00000360338 CEP164Q9UPV0 1460 aa17.02■□□□□ 0.31
ZNF460-201ENST00000360338 KANK4Q5T7N3 995 aaPredicted RBP16.98■□□□□ 0.31
ZNF460-201ENST00000360338 PELP1Q8IZL8 1130 aaKnown RBP16.98■□□□□ 0.31
ZNF460-201ENST00000360338 PEG3Q9GZU2 1588 aa16.97■□□□□ 0.31
ZNF460-201ENST00000360338 NCAPD3P42695 1498 aa16.94■□□□□ 0.3
ZNF460-201ENST00000360338 YTHDC1Q96MU7 727 aaKnown RBP16.94■□□□□ 0.3
ZNF460-201ENST00000360338 ARID3CA6NKF2 412 aa16.92■□□□□ 0.3
ZNF460-201ENST00000360338 CUX2O14529 1486 aa16.9■□□□□ 0.3
ZNF460-201ENST00000360338 DIEXFQ68CQ4 756 aaKnown RBP16.89■□□□□ 0.29
ZNF460-201ENST00000360338 CUX1P39880 1505 aa16.88■□□□□ 0.29
ZNF460-201ENST00000360338 KIF27Q86VH2 1401 aa16.87■□□□□ 0.29
ZNF460-201ENST00000360338 NESP48681 1621 aa16.86■□□□□ 0.29
ZNF460-201ENST00000360338 CADPSQ9ULU8 1353 aa16.85■□□□□ 0.29
ZNF460-201ENST00000360338 FAM50AQ14320 339 aaKnown RBP16.84■□□□□ 0.29
ZNF460-201ENST00000360338 VPS8Q8N3P4 1428 aa16.84■□□□□ 0.29
ZNF460-201ENST00000360338 NEUROD1Q13562 356 aa16.82■□□□□ 0.28
ZNF460-201ENST00000360338 CFTRP13569 1480 aa16.8■□□□□ 0.28
ZNF460-201ENST00000360338 ACIN1Q9UKV3 1341 aaKnown RBP16.78■□□□□ 0.28
ZNF460-201ENST00000360338 TOP2BQ02880 1626 aa16.78■□□□□ 0.28
ZNF460-201ENST00000360338 CC2D2AQ9P2K1 1620 aa16.78■□□□□ 0.28
ZNF460-201ENST00000360338 RAD54L2Q9Y4B4 1467 aa16.78■□□□□ 0.28
ZNF460-201ENST00000360338 KIF21BO75037 1637 aa16.76■□□□□ 0.27
ZNF460-201ENST00000360338 CARMIL1Q5VZK9 1371 aa16.76■□□□□ 0.27
ZNF460-201ENST00000360338 TDRD9Q8NDG6 1382 aaKnown RBP16.75■□□□□ 0.27
ZNF460-201ENST00000360338 HMGXB3Q12766 1538 aa16.74■□□□□ 0.27
ZNF460-201ENST00000360338 IGF1RP08069 1367 aa16.73■□□□□ 0.27
ZNF460-201ENST00000360338 FGD5Q6ZNL6 1462 aa16.73■□□□□ 0.27
ZNF460-201ENST00000360338 GTF3C3Q9Y5Q9 886 aa16.72■□□□□ 0.27
ZNF460-201ENST00000360338 ARAP1Q96P48 1450 aa16.72■□□□□ 0.27
ZNF460-201ENST00000360338 FANCD2Q9BXW9 1451 aa16.71■□□□□ 0.26
ZNF460-201ENST00000360338 PRXQ9BXM0 1461 aa16.69■□□□□ 0.26
ZNF460-201ENST00000360338 ZNF316A6NFI3 1004 aaPredicted RBP16.69■□□□□ 0.26
ZNF460-201ENST00000360338 CENPBP07199 599 aaPredicted RBP16.68■□□□□ 0.26
ZNF460-201ENST00000360338 FBLN2P98095 1184 aa16.64■□□□□ 0.25
ZNF460-201ENST00000360338 FHOD3Q2V2M9 1422 aa16.61■□□□□ 0.25
ZNF460-201ENST00000360338 MIER1Q8N108 512 aa16.6■□□□□ 0.25
ZNF460-201ENST00000360338 ARHGAP35Q9NRY4 1499 aa16.6■□□□□ 0.25
ZNF460-201ENST00000360338 HIRIP3Q9BW71 556 aaPredicted RBP16.59■□□□□ 0.25
ZNF460-201ENST00000360338 BIVM-ERCC5R4GMW8 1640 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms