RNA–Protein interactions for RNA: ENST00000359149.7

ATP2B3-203, Transcript of ATPase plasma membrane Ca2+ transporting 3, humanhuman

TSL 1 (best) BASIC

Gene ATP2B3, Length 4,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3-203ENST00000359149 NISCHQ9Y2I1 1504 aa23.48■■□□□ 1.35
ATP2B3-203ENST00000359149 DCAF8L2P0C7V8 631 aa21.58■■□□□ 1.04
ATP2B3-203ENST00000359149 SHROOM4Q9ULL8 1493 aa20.74■□□□□ 0.91
ATP2B3-203ENST00000359149 SUPT5HO00267 1087 aaKnown RBP20.34■□□□□ 0.85
ATP2B3-203ENST00000359149 ABCC9O60706 1549 aa19.99■□□□□ 0.79
ATP2B3-203ENST00000359149 CCDC180Q9P1Z9 1646 aa19.78■□□□□ 0.76
ATP2B3-203ENST00000359149 ZCCHC6Q5VYS8 1495 aaKnown RBP19.56■□□□□ 0.72
ATP2B3-203ENST00000359149 PABPN1Q86U42 306 aaKnown RBP eCLIP19.37■□□□□ 0.69
ATP2B3-203ENST00000359149 EHMT2Q96KQ7 1210 aa19.15■□□□□ 0.66
ATP2B3-203ENST00000359149 SCRIBQ14160 1630 aa19.13■□□□□ 0.65
ATP2B3-203ENST00000359149 FAM9AQ8IZU1 332 aaPredicted RBP19■□□□□ 0.63
ATP2B3-203ENST00000359149 TRIM41Q8WV44 630 aa18.87■□□□□ 0.61
ATP2B3-203ENST00000359149 DCAF1Q9Y4B6 1507 aa18.86■□□□□ 0.61
ATP2B3-203ENST00000359149 RB1CC1Q8TDY2 1594 aa18.86■□□□□ 0.61
ATP2B3-203ENST00000359149 NACADO15069 1562 aa18.86■□□□□ 0.61
ATP2B3-203ENST00000359149 CHIC1Q5VXU3 224 aa18.76■□□□□ 0.59
ATP2B3-203ENST00000359149 CECR2Q9BXF3 1484 aa18.53■□□□□ 0.56
ATP2B3-203ENST00000359149 RSF1Q96T23 1441 aaPredicted RBP18.52■□□□□ 0.55
ATP2B3-203ENST00000359149 MYO15BQ96JP2 1530 aa18.51■□□□□ 0.55
ATP2B3-203ENST00000359149 LOC105371045A0A1W2PR82 267 aa18.47■□□□□ 0.55
ATP2B3-203ENST00000359149 RANGAP1P46060 587 aaPredicted RBP18.47■□□□□ 0.55
ATP2B3-203ENST00000359149 UBTFP17480 764 aaKnown RBP18.34■□□□□ 0.53
ATP2B3-203ENST00000359149 TTBK1Q5TCY1 1321 aaPredicted RBP18.32■□□□□ 0.52
ATP2B3-203ENST00000359149 PCGF6Q9BYE7 350 aa18.29■□□□□ 0.52
ATP2B3-203ENST00000359149 MROH2BQ7Z745 1585 aa18.27■□□□□ 0.52
ATP2B3-203ENST00000359149 BAZ1AQ9NRL2 1556 aaPredicted RBP18.2■□□□□ 0.5
ATP2B3-203ENST00000359149 PPARGC1BQ86YN6 1023 aaKnown RBP18.13■□□□□ 0.49
ATP2B3-203ENST00000359149 APLP2Q06481 763 aa18.1■□□□□ 0.49
ATP2B3-203ENST00000359149 BAZ1BQ9UIG0 1483 aaKnown RBP18.06■□□□□ 0.48
ATP2B3-203ENST00000359149 WIZO95785 1651 aa18.03■□□□□ 0.48
ATP2B3-203ENST00000359149 ATP1B4Q9UN42 357 aaPredicted RBP18.01■□□□□ 0.47
ATP2B3-203ENST00000359149 CCDC88BA6NC98 1476 aa17.89■□□□□ 0.46
ATP2B3-203ENST00000359149 SMARCA4P51532 1647 aa17.89■□□□□ 0.45
ATP2B3-203ENST00000359149 CSRNP3Q8WYN3 585 aa17.88■□□□□ 0.45
ATP2B3-203ENST00000359149 ATAD2BQ9ULI0 1458 aa17.85■□□□□ 0.45
ATP2B3-203ENST00000359149 BICRAQ9NZM4 1560 aa17.8■□□□□ 0.44
ATP2B3-203ENST00000359149 SMARCA2P51531 1590 aa17.79■□□□□ 0.44
ATP2B3-203ENST00000359149 TOP2AP11388 1531 aaKnown RBP17.76■□□□□ 0.43
ATP2B3-203ENST00000359149 WRNQ14191 1432 aaPredicted RBP eCLIP17.73■□□□□ 0.43
ATP2B3-203ENST00000359149 ABCC8Q09428 1581 aa17.67■□□□□ 0.42
ATP2B3-203ENST00000359149 FBLN2P98095 1184 aa17.67■□□□□ 0.42
ATP2B3-203ENST00000359149 EIF4G1Q04637 1599 aaKnown RBP17.66■□□□□ 0.42
ATP2B3-203ENST00000359149 UNC13AQ9UPW8 1703 aa17.66■□□□□ 0.42
ATP2B3-203ENST00000359149 TRIM26Q12899 539 aaPredicted RBP17.65■□□□□ 0.42
ATP2B3-203ENST00000359149 HRCP23327 699 aa17.62■□□□□ 0.41
ATP2B3-203ENST00000359149 P3H3Q8IVL6 736 aa17.61■□□□□ 0.41
ATP2B3-203ENST00000359149 SOGA1O94964 1423 aa17.56■□□□□ 0.4
ATP2B3-203ENST00000359149 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.55■□□□□ 0.4
ATP2B3-203ENST00000359149 HNRNPUL2Q1KMD3 747 aaKnown RBP17.55■□□□□ 0.4
ATP2B3-203ENST00000359149 NCAPD3P42695 1498 aa17.53■□□□□ 0.4
ATP2B3-203ENST00000359149 ITGAEP38570 1179 aa17.53■□□□□ 0.4
ATP2B3-203ENST00000359149 CADPSQ9ULU8 1353 aa17.52■□□□□ 0.39
ATP2B3-203ENST00000359149 DNAJC5BQ9UF47 199 aa17.52■□□□□ 0.39
ATP2B3-203ENST00000359149 CCER1Q8TC90 406 aaPredicted RBP17.5■□□□□ 0.39
ATP2B3-203ENST00000359149 ARID3CA6NKF2 412 aa17.42■□□□□ 0.38
ATP2B3-203ENST00000359149 CC2D2AQ9P2K1 1620 aa17.42■□□□□ 0.38
ATP2B3-203ENST00000359149 ERCC6Q03468 1493 aa17.38■□□□□ 0.37
ATP2B3-203ENST00000359149 KIF27Q86VH2 1401 aa17.38■□□□□ 0.37
ATP2B3-203ENST00000359149 EEA1Q15075 1411 aa17.37■□□□□ 0.37
ATP2B3-203ENST00000359149 CUX2O14529 1486 aa17.34■□□□□ 0.37
ATP2B3-203ENST00000359149 RUSC2Q8N2Y8 1516 aa17.34■□□□□ 0.37
ATP2B3-203ENST00000359149 PDS5BQ9NTI5 1447 aa17.33■□□□□ 0.37
ATP2B3-203ENST00000359149 GOLGA3Q08378 1498 aa17.3■□□□□ 0.36
ATP2B3-203ENST00000359149 TDRD9Q8NDG6 1382 aaKnown RBP17.29■□□□□ 0.36
ATP2B3-203ENST00000359149 FANCD2Q9BXW9 1451 aa17.29■□□□□ 0.36
ATP2B3-203ENST00000359149 CEP162Q5TB80 1403 aa17.29■□□□□ 0.36
ATP2B3-203ENST00000359149 NESP48681 1621 aa17.28■□□□□ 0.36
ATP2B3-203ENST00000359149 CLIP1P30622 1438 aa17.28■□□□□ 0.36
ATP2B3-203ENST00000359149 CHMP7Q8WUX9 453 aaPredicted RBP17.28■□□□□ 0.36
ATP2B3-203ENST00000359149 YTHDC1Q96MU7 727 aaKnown RBP17.27■□□□□ 0.35
ATP2B3-203ENST00000359149 FAM50AQ14320 339 aaKnown RBP17.26■□□□□ 0.35
ATP2B3-203ENST00000359149 HMGXB3Q12766 1538 aa17.25■□□□□ 0.35
ATP2B3-203ENST00000359149 CEP164Q9UPV0 1460 aa17.24■□□□□ 0.35
ATP2B3-203ENST00000359149 TNIKQ9UKE5 1360 aa17.24■□□□□ 0.35
ATP2B3-203ENST00000359149 CARMIL1Q5VZK9 1371 aa17.22■□□□□ 0.35
ATP2B3-203ENST00000359149 CFTRP13569 1480 aa17.21■□□□□ 0.35
ATP2B3-203ENST00000359149 PEG3Q9GZU2 1588 aa17.19■□□□□ 0.34
ATP2B3-203ENST00000359149 ZEB1P37275 1124 aaPredicted RBP17.18■□□□□ 0.34
ATP2B3-203ENST00000359149 RAD54L2Q9Y4B4 1467 aa17.11■□□□□ 0.33
ATP2B3-203ENST00000359149 CENPBP07199 599 aaPredicted RBP17.1■□□□□ 0.33
ATP2B3-203ENST00000359149 SYNJ1O43426 1573 aa17.1■□□□□ 0.33
ATP2B3-203ENST00000359149 FGD5Q6ZNL6 1462 aa17.1■□□□□ 0.33
ATP2B3-203ENST00000359149 RAPGEF2Q9Y4G8 1499 aa17.09■□□□□ 0.33
ATP2B3-203ENST00000359149 MYT1LQ9UL68 1186 aa17.06■□□□□ 0.32
ATP2B3-203ENST00000359149 CUX1P39880 1505 aa17.01■□□□□ 0.31
ATP2B3-203ENST00000359149 IGF1RP08069 1367 aa17.01■□□□□ 0.31
ATP2B3-203ENST00000359149 ZNF777Q9ULD5 760 aaPredicted RBP16.98■□□□□ 0.31
ATP2B3-203ENST00000359149 PELP1Q8IZL8 1130 aaKnown RBP16.97■□□□□ 0.31
ATP2B3-203ENST00000359149 CDK11AQ9UQ88 783 aaPredicted RBP16.94■□□□□ 0.3
ATP2B3-203ENST00000359149 AQRO60306 1485 aaKnown RBP eCLIP16.93■□□□□ 0.3
ATP2B3-203ENST00000359149 MTUS2Q5JR59 1369 aa16.92■□□□□ 0.3
ATP2B3-203ENST00000359149 TOPBP1Q92547 1522 aa16.91■□□□□ 0.3
ATP2B3-203ENST00000359149 TRIM52Q96A61 297 aa16.9■□□□□ 0.3
ATP2B3-203ENST00000359149 TOP2BQ02880 1626 aa16.9■□□□□ 0.3
ATP2B3-203ENST00000359149 KANK4Q5T7N3 995 aaPredicted RBP16.89■□□□□ 0.29
ATP2B3-203ENST00000359149 POLA1P09884 1462 aaPredicted RBP16.88■□□□□ 0.29
ATP2B3-203ENST00000359149 GAPVD1Q14C86 1478 aa16.88■□□□□ 0.29
ATP2B3-203ENST00000359149 VPS8Q8N3P4 1428 aa16.86■□□□□ 0.29
ATP2B3-203ENST00000359149 CHIC2Q9UKJ5 165 aa16.86■□□□□ 0.29
ATP2B3-203ENST00000359149 NEUROD1Q13562 356 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms