RNA–Protein interactions for RNA: ENST00000343987.2

PLEKHM3-201, Transcript of pleckstrin homology domain containing M3, humanhuman

TSL 2

Gene PLEKHM3, Length 1,262 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHM3-201ENST00000343987 AEBP2Q6ZN18 517 aaPredicted RBP32.66■■■□□ 2.82
PLEKHM3-201ENST00000343987 CHIC1Q5VXU3 224 aa31.51■■■□□ 2.63
PLEKHM3-201ENST00000343987 SENP3Q9H4L4 574 aaPredicted RBP28.01■■■□□ 2.07
PLEKHM3-201ENST00000343987 NISCHQ9Y2I1 1504 aa27.77■■■□□ 2.04
PLEKHM3-201ENST00000343987 PHF23Q9BUL5 403 aaPredicted RBP27.61■■■□□ 2.01
PLEKHM3-201ENST00000343987 FOXD1Q16676 465 aa25.91■■□□□ 1.74
PLEKHM3-201ENST00000343987 PLPPR3Q6T4P5 718 aa25.45■■□□□ 1.66
PLEKHM3-201ENST00000343987 CCDC180Q9P1Z9 1646 aa24.81■■□□□ 1.56
PLEKHM3-201ENST00000343987 ABCC9O60706 1549 aa24.64■■□□□ 1.53
PLEKHM3-201ENST00000343987 ADRA2BP18089 450 aa24.45■■□□□ 1.5
PLEKHM3-201ENST00000343987 PPP6R1Q9UPN7 881 aa24.45■■□□□ 1.5
PLEKHM3-201ENST00000343987 PIAS4Q8N2W9 510 aaPredicted RBP24.4■■□□□ 1.5
PLEKHM3-201ENST00000343987 MSH5O43196 834 aa24.28■■□□□ 1.48
PLEKHM3-201ENST00000343987 RB1CC1Q8TDY2 1594 aa23.56■■□□□ 1.36
PLEKHM3-201ENST00000343987 NACADO15069 1562 aa23.47■■□□□ 1.35
PLEKHM3-201ENST00000343987 DCAF8L2P0C7V8 631 aa23.35■■□□□ 1.33
PLEKHM3-201ENST00000343987 MYO15BQ96JP2 1530 aa23.25■■□□□ 1.31
PLEKHM3-201ENST00000343987 DNAJC5BQ9UF47 199 aa23.05■■□□□ 1.28
PLEKHM3-201ENST00000343987 ZCCHC6Q5VYS8 1495 aaKnown RBP23.03■■□□□ 1.28
PLEKHM3-201ENST00000343987 DCAF1Q9Y4B6 1507 aa23■■□□□ 1.27
PLEKHM3-201ENST00000343987 PABPN1Q86U42 306 aaKnown RBP eCLIP23■■□□□ 1.27
PLEKHM3-201ENST00000343987 UNC13AQ9UPW8 1703 aa22.94■■□□□ 1.26
PLEKHM3-201ENST00000343987 POTEDQ86YR6 584 aa22.88■■□□□ 1.25
PLEKHM3-201ENST00000343987 BICRAQ9NZM4 1560 aa22.85■■□□□ 1.25
PLEKHM3-201ENST00000343987 SHROOM4Q9ULL8 1493 aa22.63■■□□□ 1.21
PLEKHM3-201ENST00000343987 SCAF1Q9H7N4 1312 aaKnown RBP22.61■■□□□ 1.21
PLEKHM3-201ENST00000343987 SCRIBQ14160 1630 aa22.55■■□□□ 1.2
PLEKHM3-201ENST00000343987 MAPK8IP2Q13387 824 aaPredicted RBP22.3■■□□□ 1.16
PLEKHM3-201ENST00000343987 PPP4R3CPQ6ZMV5 832 aa22.28■■□□□ 1.16
PLEKHM3-201ENST00000343987 EIF4G1Q04637 1599 aaKnown RBP22.27■■□□□ 1.16
PLEKHM3-201ENST00000343987 CC2D2AQ9P2K1 1620 aa22.27■■□□□ 1.16
PLEKHM3-201ENST00000343987 DMRT2Q9Y5R5 561 aa22.21■■□□□ 1.15
PLEKHM3-201ENST00000343987 CECR2Q9BXF3 1484 aa22.21■■□□□ 1.15
PLEKHM3-201ENST00000343987 CNKSR2Q8WXI2 1034 aa21.83■■□□□ 1.09
PLEKHM3-201ENST00000343987 NCAPD3P42695 1498 aa21.71■■□□□ 1.07
PLEKHM3-201ENST00000343987 NCBP3Q53F19 620 aaKnown RBP21.69■■□□□ 1.06
PLEKHM3-201ENST00000343987 ATAD2BQ9ULI0 1458 aa21.62■■□□□ 1.05
PLEKHM3-201ENST00000343987 SMARCA4P51532 1647 aa21.58■■□□□ 1.04
PLEKHM3-201ENST00000343987 SMARCA2P51531 1590 aa21.55■■□□□ 1.04
PLEKHM3-201ENST00000343987 BAZ1AQ9NRL2 1556 aaPredicted RBP21.53■■□□□ 1.04
PLEKHM3-201ENST00000343987 HOXD11P31277 338 aaPredicted RBP21.53■■□□□ 1.04
PLEKHM3-201ENST00000343987 RNF216Q9NWF9 866 aaPredicted RBP21.53■■□□□ 1.04
PLEKHM3-201ENST00000343987 HMGXB3Q12766 1538 aa21.49■■□□□ 1.03
PLEKHM3-201ENST00000343987 PEG3Q9GZU2 1588 aa21.43■■□□□ 1.02
PLEKHM3-201ENST00000343987 BAZ1BQ9UIG0 1483 aaKnown RBP21.38■■□□□ 1.01
PLEKHM3-201ENST00000343987 MROH2BQ7Z745 1585 aa21.37■■□□□ 1.01
PLEKHM3-201ENST00000343987 DCAF8L1A6NGE4 600 aa21.34■■□□□ 1.01
PLEKHM3-201ENST00000343987 ERCC6Q03468 1493 aa21.26■□□□□ 0.99
PLEKHM3-201ENST00000343987 CUX2O14529 1486 aa21.22■□□□□ 0.99
PLEKHM3-201ENST00000343987 NESP48681 1621 aa21.21■□□□□ 0.99
PLEKHM3-201ENST00000343987 NPM3O75607 178 aaKnown RBP21.2■□□□□ 0.98
PLEKHM3-201ENST00000343987 LAMC3Q9Y6N6 1575 aa21.13■□□□□ 0.97
PLEKHM3-201ENST00000343987 KCNA4P22459 653 aa21.11■□□□□ 0.97
PLEKHM3-201ENST00000343987 DNAJC5Q9H3Z4 198 aa21.1■□□□□ 0.97
PLEKHM3-201ENST00000343987 WIZO95785 1651 aa21.09■□□□□ 0.97
PLEKHM3-201ENST00000343987 CADPSQ9ULU8 1353 aa21.04■□□□□ 0.96
PLEKHM3-201ENST00000343987 PDS5BQ9NTI5 1447 aa21.04■□□□□ 0.96
PLEKHM3-201ENST00000343987 RSF1Q96T23 1441 aaPredicted RBP21.03■□□□□ 0.96
PLEKHM3-201ENST00000343987 THOC2Q8NI27 1593 aaKnown RBP20.94■□□□□ 0.94
PLEKHM3-201ENST00000343987 KIF21AQ7Z4S6 1674 aa20.89■□□□□ 0.94
PLEKHM3-201ENST00000343987 TOP2AP11388 1531 aaKnown RBP20.87■□□□□ 0.93
PLEKHM3-201ENST00000343987 CFTRP13569 1480 aa20.82■□□□□ 0.92
PLEKHM3-201ENST00000343987 MRC2Q9UBG0 1479 aa20.8■□□□□ 0.92
PLEKHM3-201ENST00000343987 FANCD2Q9BXW9 1451 aa20.75■□□□□ 0.91
PLEKHM3-201ENST00000343987 WDR62O43379 1518 aa20.74■□□□□ 0.91
PLEKHM3-201ENST00000343987 CEP164Q9UPV0 1460 aa20.74■□□□□ 0.91
PLEKHM3-201ENST00000343987 CCDC88BA6NC98 1476 aa20.66■□□□□ 0.9
PLEKHM3-201ENST00000343987 RNF39Q9H2S5 420 aa20.65■□□□□ 0.9
PLEKHM3-201ENST00000343987 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.61■□□□□ 0.89
PLEKHM3-201ENST00000343987 URB2Q14146 1524 aaKnown RBP20.56■□□□□ 0.88
PLEKHM3-201ENST00000343987 CACNB1Q02641 598 aaPredicted RBP20.55■□□□□ 0.88
PLEKHM3-201ENST00000343987 PRDM2Q13029 1718 aa20.51■□□□□ 0.87
PLEKHM3-201ENST00000343987 C1QBPQ07021 282 aaKnown RBP20.46■□□□□ 0.87
PLEKHM3-201ENST00000343987 ABCC8Q09428 1581 aa20.4■□□□□ 0.86
PLEKHM3-201ENST00000343987 TOPBP1Q92547 1522 aa20.37■□□□□ 0.85
PLEKHM3-201ENST00000343987 IFT140Q96RY7 1462 aa20.36■□□□□ 0.85
PLEKHM3-201ENST00000343987 OSCARQ8IYS5 282 aa20.34■□□□□ 0.85
PLEKHM3-201ENST00000343987 DNMBPQ6XZF7 1577 aa20.29■□□□□ 0.84
PLEKHM3-201ENST00000343987 ZNF608Q9ULD9 1512 aaPredicted RBP20.27■□□□□ 0.83
PLEKHM3-201ENST00000343987 SUPT5HO00267 1087 aaKnown RBP20.18■□□□□ 0.82
PLEKHM3-201ENST00000343987 POLA1P09884 1462 aaPredicted RBP20.17■□□□□ 0.82
PLEKHM3-201ENST00000343987 TARBP1Q13395 1621 aaKnown RBP20.16■□□□□ 0.82
PLEKHM3-201ENST00000343987 AQRO60306 1485 aaKnown RBP eCLIP20.12■□□□□ 0.81
PLEKHM3-201ENST00000343987 SOGA1O94964 1423 aa20.12■□□□□ 0.81
PLEKHM3-201ENST00000343987 TRIM41Q8WV44 630 aa20.12■□□□□ 0.81
PLEKHM3-201ENST00000343987 EIF4G3O43432 1585 aaKnown RBP20.12■□□□□ 0.81
PLEKHM3-201ENST00000343987 SLC4A1APQ9BWU0 796 aaKnown RBP20.1■□□□□ 0.81
PLEKHM3-201ENST00000343987 U3KPZ7 1027 aaPredicted RBP20.1■□□□□ 0.81
PLEKHM3-201ENST00000343987 SLC4A2P04920 1241 aa20.09■□□□□ 0.81
PLEKHM3-201ENST00000343987 RAD54L2Q9Y4B4 1467 aa20.08■□□□□ 0.81
PLEKHM3-201ENST00000343987 CUX1P39880 1505 aa20.06■□□□□ 0.8
PLEKHM3-201ENST00000343987 FGD5Q6ZNL6 1462 aa20.05■□□□□ 0.8
PLEKHM3-201ENST00000343987 TDRD9Q8NDG6 1382 aaKnown RBP20.04■□□□□ 0.8
PLEKHM3-201ENST00000343987 WDR97A6NE52 1622 aa20.01■□□□□ 0.79
PLEKHM3-201ENST00000343987 FBLN2P98095 1184 aa19.95■□□□□ 0.78
PLEKHM3-201ENST00000343987 RIMBP3CA6NJZ7 1639 aa19.94■□□□□ 0.78
PLEKHM3-201ENST00000343987 RIMBP3BA6NNM3 1639 aa19.94■□□□□ 0.78
PLEKHM3-201ENST00000343987 RIMBP3Q9UFD9 1639 aa19.94■□□□□ 0.78
PLEKHM3-201ENST00000343987 CHD1O14646 1710 aa19.92■□□□□ 0.78
PLEKHM3-201ENST00000343987 GRIN2BQ13224 1484 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms