RNA–Protein interactions for RNA: ENST00000337940.4

NR1I2-201, Transcript of nuclear receptor subfamily 1 group I member 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NR1I2, Length 2,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I2-201ENST00000337940 NISCHQ9Y2I1 1504 aa24.34■■□□□ 1.49
NR1I2-201ENST00000337940 SHROOM4Q9ULL8 1493 aa21.08■□□□□ 0.97
NR1I2-201ENST00000337940 SUPT5HO00267 1087 aaKnown RBP20.66■□□□□ 0.9
NR1I2-201ENST00000337940 DCAF8L2P0C7V8 631 aa20.56■□□□□ 0.88
NR1I2-201ENST00000337940 ZCCHC6Q5VYS8 1495 aaKnown RBP20.56■□□□□ 0.88
NR1I2-201ENST00000337940 CCDC180Q9P1Z9 1646 aa20.55■□□□□ 0.88
NR1I2-201ENST00000337940 CHIC1Q5VXU3 224 aa19.94■□□□□ 0.78
NR1I2-201ENST00000337940 MYO15BQ96JP2 1530 aa19.9■□□□□ 0.78
NR1I2-201ENST00000337940 DCAF1Q9Y4B6 1507 aa19.8■□□□□ 0.76
NR1I2-201ENST00000337940 SCRIBQ14160 1630 aa19.52■□□□□ 0.72
NR1I2-201ENST00000337940 LOC105371045A0A1W2PR82 267 aa19.5■□□□□ 0.71
NR1I2-201ENST00000337940 PCGF6Q9BYE7 350 aa19.44■□□□□ 0.7
NR1I2-201ENST00000337940 ABCC9O60706 1549 aa19.39■□□□□ 0.69
NR1I2-201ENST00000337940 RSF1Q96T23 1441 aaPredicted RBP19.32■□□□□ 0.68
NR1I2-201ENST00000337940 HRCP23327 699 aa19.3■□□□□ 0.68
NR1I2-201ENST00000337940 RB1CC1Q8TDY2 1594 aa19.15■□□□□ 0.66
NR1I2-201ENST00000337940 FAM9AQ8IZU1 332 aaPredicted RBP19.15■□□□□ 0.66
NR1I2-201ENST00000337940 TRIM41Q8WV44 630 aa19.13■□□□□ 0.65
NR1I2-201ENST00000337940 EHMT2Q96KQ7 1210 aa19.13■□□□□ 0.65
NR1I2-201ENST00000337940 CECR2Q9BXF3 1484 aa19.12■□□□□ 0.65
NR1I2-201ENST00000337940 PPARGC1BQ86YN6 1023 aaKnown RBP19.11■□□□□ 0.65
NR1I2-201ENST00000337940 NACADO15069 1562 aa19.05■□□□□ 0.64
NR1I2-201ENST00000337940 MROH2BQ7Z745 1585 aa19.01■□□□□ 0.63
NR1I2-201ENST00000337940 WIZO95785 1651 aa18.92■□□□□ 0.62
NR1I2-201ENST00000337940 TRIM26Q12899 539 aaPredicted RBP18.92■□□□□ 0.62
NR1I2-201ENST00000337940 BAZ1AQ9NRL2 1556 aaPredicted RBP18.67■□□□□ 0.58
NR1I2-201ENST00000337940 PABPN1Q86U42 306 aaKnown RBP eCLIP18.62■□□□□ 0.57
NR1I2-201ENST00000337940 UNC13AQ9UPW8 1703 aa18.56■□□□□ 0.56
NR1I2-201ENST00000337940 ABCC8Q09428 1581 aa18.56■□□□□ 0.56
NR1I2-201ENST00000337940 SMARCA4P51532 1647 aa18.54■□□□□ 0.56
NR1I2-201ENST00000337940 CCDC88BA6NC98 1476 aa18.52■□□□□ 0.56
NR1I2-201ENST00000337940 EIF4G1Q04637 1599 aaKnown RBP18.52■□□□□ 0.56
NR1I2-201ENST00000337940 TOP2AP11388 1531 aaKnown RBP18.5■□□□□ 0.55
NR1I2-201ENST00000337940 TTBK1Q5TCY1 1321 aaPredicted RBP18.47■□□□□ 0.55
NR1I2-201ENST00000337940 SMARCA2P51531 1590 aa18.45■□□□□ 0.54
NR1I2-201ENST00000337940 ZEB1P37275 1124 aaPredicted RBP18.39■□□□□ 0.53
NR1I2-201ENST00000337940 SOGA1O94964 1423 aa18.38■□□□□ 0.53
NR1I2-201ENST00000337940 BICRAQ9NZM4 1560 aa18.33■□□□□ 0.53
NR1I2-201ENST00000337940 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.33■□□□□ 0.52
NR1I2-201ENST00000337940 RUSC2Q8N2Y8 1516 aa18.32■□□□□ 0.52
NR1I2-201ENST00000337940 UBTFP17480 764 aaKnown RBP18.27■□□□□ 0.52
NR1I2-201ENST00000337940 CSRNP3Q8WYN3 585 aa18.24■□□□□ 0.51
NR1I2-201ENST00000337940 CEP162Q5TB80 1403 aa18.23■□□□□ 0.51
NR1I2-201ENST00000337940 CCER1Q8TC90 406 aaPredicted RBP18.22■□□□□ 0.51
NR1I2-201ENST00000337940 WRNQ14191 1432 aaPredicted RBP eCLIP18.15■□□□□ 0.5
NR1I2-201ENST00000337940 TNIKQ9UKE5 1360 aa18.14■□□□□ 0.49
NR1I2-201ENST00000337940 RANGAP1P46060 587 aaPredicted RBP18.1■□□□□ 0.49
NR1I2-201ENST00000337940 ATAD2BQ9ULI0 1458 aa18.09■□□□□ 0.49
NR1I2-201ENST00000337940 SYNJ1O43426 1573 aa18.07■□□□□ 0.48
NR1I2-201ENST00000337940 PEG3Q9GZU2 1588 aa18.07■□□□□ 0.48
NR1I2-201ENST00000337940 BAZ1BQ9UIG0 1483 aaKnown RBP18.06■□□□□ 0.48
NR1I2-201ENST00000337940 EEA1Q15075 1411 aa18.06■□□□□ 0.48
NR1I2-201ENST00000337940 GOLGA3Q08378 1498 aa18.03■□□□□ 0.48
NR1I2-201ENST00000337940 HNRNPUL2Q1KMD3 747 aaKnown RBP17.92■□□□□ 0.46
NR1I2-201ENST00000337940 CEP164Q9UPV0 1460 aa17.92■□□□□ 0.46
NR1I2-201ENST00000337940 RAPGEF2Q9Y4G8 1499 aa17.89■□□□□ 0.45
NR1I2-201ENST00000337940 CLIP1P30622 1438 aa17.89■□□□□ 0.45
NR1I2-201ENST00000337940 SCAF1Q9H7N4 1312 aaKnown RBP17.86■□□□□ 0.45
NR1I2-201ENST00000337940 KIF21BO75037 1637 aa17.84■□□□□ 0.45
NR1I2-201ENST00000337940 DIEXFQ68CQ4 756 aaKnown RBP17.82■□□□□ 0.44
NR1I2-201ENST00000337940 APLP2Q06481 763 aa17.79■□□□□ 0.44
NR1I2-201ENST00000337940 TOP2BQ02880 1626 aa17.76■□□□□ 0.43
NR1I2-201ENST00000337940 VPS8Q8N3P4 1428 aa17.76■□□□□ 0.43
NR1I2-201ENST00000337940 NEUROD1Q13562 356 aa17.69■□□□□ 0.42
NR1I2-201ENST00000337940 NCAPD3P42695 1498 aa17.68■□□□□ 0.42
NR1I2-201ENST00000337940 CUX1P39880 1505 aa17.67■□□□□ 0.42
NR1I2-201ENST00000337940 BIVM-ERCC5R4GMW8 1640 aa17.67■□□□□ 0.42
NR1I2-201ENST00000337940 ZNF316A6NFI3 1004 aaPredicted RBP17.64■□□□□ 0.41
NR1I2-201ENST00000337940 KANK4Q5T7N3 995 aaPredicted RBP17.63■□□□□ 0.41
NR1I2-201ENST00000337940 HMGXB3Q12766 1538 aa17.62■□□□□ 0.41
NR1I2-201ENST00000337940 ACIN1Q9UKV3 1341 aaKnown RBP17.62■□□□□ 0.41
NR1I2-201ENST00000337940 PRXQ9BXM0 1461 aa17.61■□□□□ 0.41
NR1I2-201ENST00000337940 ARAP1Q96P48 1450 aa17.59■□□□□ 0.41
NR1I2-201ENST00000337940 KIF27Q86VH2 1401 aa17.57■□□□□ 0.4
NR1I2-201ENST00000337940 CFTRP13569 1480 aa17.57■□□□□ 0.4
NR1I2-201ENST00000337940 YTHDC1Q96MU7 727 aaKnown RBP17.56■□□□□ 0.4
NR1I2-201ENST00000337940 ERICH3Q5RHP9 1530 aa17.54■□□□□ 0.4
NR1I2-201ENST00000337940 SLC24A1O60721 1099 aa17.52■□□□□ 0.39
NR1I2-201ENST00000337940 ITGAEP38570 1179 aa17.5■□□□□ 0.39
NR1I2-201ENST00000337940 PELP1Q8IZL8 1130 aaKnown RBP17.5■□□□□ 0.39
NR1I2-201ENST00000337940 GTF3C3Q9Y5Q9 886 aa17.5■□□□□ 0.39
NR1I2-201ENST00000337940 MIER1Q8N108 512 aa17.49■□□□□ 0.39
NR1I2-201ENST00000337940 CENPBP07199 599 aaPredicted RBP17.48■□□□□ 0.39
NR1I2-201ENST00000337940 CUX2O14529 1486 aa17.47■□□□□ 0.39
NR1I2-201ENST00000337940 ARHGAP35Q9NRY4 1499 aa17.44■□□□□ 0.38
NR1I2-201ENST00000337940 IGF1RP08069 1367 aa17.42■□□□□ 0.38
NR1I2-201ENST00000337940 CADPSQ9ULU8 1353 aa17.41■□□□□ 0.38
NR1I2-201ENST00000337940 P3H3Q8IVL6 736 aa17.41■□□□□ 0.38
NR1I2-201ENST00000337940 DHX57Q6P158 1386 aaKnown RBP17.4■□□□□ 0.38
NR1I2-201ENST00000337940 FGD5Q6ZNL6 1462 aa17.37■□□□□ 0.37
NR1I2-201ENST00000337940 ATP1B4Q9UN42 357 aaPredicted RBP17.36■□□□□ 0.37
NR1I2-201ENST00000337940 CARMIL1Q5VZK9 1371 aa17.35■□□□□ 0.37
NR1I2-201ENST00000337940 CC2D2AQ9P2K1 1620 aa17.32■□□□□ 0.36
NR1I2-201ENST00000337940 CCNB3Q8WWL7 1395 aa17.32■□□□□ 0.36
NR1I2-201ENST00000337940 RRBP1Q9P2E9 1410 aaKnown RBP17.31■□□□□ 0.36
NR1I2-201ENST00000337940 PRDM2Q13029 1718 aa17.31■□□□□ 0.36
NR1I2-201ENST00000337940 RAD54L2Q9Y4B4 1467 aa17.27■□□□□ 0.36
NR1I2-201ENST00000337940 FANCD2Q9BXW9 1451 aa17.27■□□□□ 0.35
NR1I2-201ENST00000337940 NESP48681 1621 aa17.26■□□□□ 0.35
NR1I2-201ENST00000337940 FAM50AQ14320 339 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms