RNA–Protein interactions for RNA: ENST00000253697.7

C3orf20-201, Transcript of chromosome 3 open reading frame 20, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C3orf20, Length 3,326 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf20-201ENST00000253697 NISCHQ9Y2I1 1504 aa23.46■■□□□ 1.35
C3orf20-201ENST00000253697 SHROOM4Q9ULL8 1493 aa20.75■□□□□ 0.91
C3orf20-201ENST00000253697 DCAF8L2P0C7V8 631 aa20.53■□□□□ 0.88
C3orf20-201ENST00000253697 SUPT5HO00267 1087 aaKnown RBP20.37■□□□□ 0.85
C3orf20-201ENST00000253697 ZCCHC6Q5VYS8 1495 aaKnown RBP19.75■□□□□ 0.75
C3orf20-201ENST00000253697 CCDC180Q9P1Z9 1646 aa19.65■□□□□ 0.74
C3orf20-201ENST00000253697 CHIC1Q5VXU3 224 aa19.36■□□□□ 0.69
C3orf20-201ENST00000253697 MYO15BQ96JP2 1530 aa19.15■□□□□ 0.66
C3orf20-201ENST00000253697 EHMT2Q96KQ7 1210 aa19.08■□□□□ 0.65
C3orf20-201ENST00000253697 LOC105371045A0A1W2PR82 267 aa19.06■□□□□ 0.64
C3orf20-201ENST00000253697 PCGF6Q9BYE7 350 aa19.03■□□□□ 0.64
C3orf20-201ENST00000253697 ABCC9O60706 1549 aa19.03■□□□□ 0.64
C3orf20-201ENST00000253697 SCRIBQ14160 1630 aa18.97■□□□□ 0.63
C3orf20-201ENST00000253697 FAM9AQ8IZU1 332 aaPredicted RBP18.96■□□□□ 0.63
C3orf20-201ENST00000253697 DCAF1Q9Y4B6 1507 aa18.91■□□□□ 0.62
C3orf20-201ENST00000253697 TRIM41Q8WV44 630 aa18.79■□□□□ 0.6
C3orf20-201ENST00000253697 RSF1Q96T23 1441 aaPredicted RBP18.67■□□□□ 0.58
C3orf20-201ENST00000253697 HRCP23327 699 aa18.64■□□□□ 0.58
C3orf20-201ENST00000253697 PPARGC1BQ86YN6 1023 aaKnown RBP18.6■□□□□ 0.57
C3orf20-201ENST00000253697 CECR2Q9BXF3 1484 aa18.54■□□□□ 0.56
C3orf20-201ENST00000253697 RB1CC1Q8TDY2 1594 aa18.48■□□□□ 0.55
C3orf20-201ENST00000253697 PABPN1Q86U42 306 aaKnown RBP eCLIP18.42■□□□□ 0.54
C3orf20-201ENST00000253697 TTBK1Q5TCY1 1321 aaPredicted RBP18.39■□□□□ 0.54
C3orf20-201ENST00000253697 TRIM26Q12899 539 aaPredicted RBP18.38■□□□□ 0.53
C3orf20-201ENST00000253697 NACADO15069 1562 aa18.38■□□□□ 0.53
C3orf20-201ENST00000253697 MROH2BQ7Z745 1585 aa18.36■□□□□ 0.53
C3orf20-201ENST00000253697 WIZO95785 1651 aa18.25■□□□□ 0.51
C3orf20-201ENST00000253697 RANGAP1P46060 587 aaPredicted RBP18.07■□□□□ 0.48
C3orf20-201ENST00000253697 UBTFP17480 764 aaKnown RBP18.05■□□□□ 0.48
C3orf20-201ENST00000253697 BAZ1AQ9NRL2 1556 aaPredicted RBP18.03■□□□□ 0.48
C3orf20-201ENST00000253697 ABCC8Q09428 1581 aa17.98■□□□□ 0.47
C3orf20-201ENST00000253697 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.95■□□□□ 0.46
C3orf20-201ENST00000253697 CCDC88BA6NC98 1476 aa17.92■□□□□ 0.46
C3orf20-201ENST00000253697 CCER1Q8TC90 406 aaPredicted RBP17.91■□□□□ 0.46
C3orf20-201ENST00000253697 ZEB1P37275 1124 aaPredicted RBP17.86■□□□□ 0.45
C3orf20-201ENST00000253697 SMARCA4P51532 1647 aa17.85■□□□□ 0.45
C3orf20-201ENST00000253697 SOGA1O94964 1423 aa17.84■□□□□ 0.45
C3orf20-201ENST00000253697 TOP2AP11388 1531 aaKnown RBP17.82■□□□□ 0.44
C3orf20-201ENST00000253697 CSRNP3Q8WYN3 585 aa17.8■□□□□ 0.44
C3orf20-201ENST00000253697 SMARCA2P51531 1590 aa17.74■□□□□ 0.43
C3orf20-201ENST00000253697 UNC13AQ9UPW8 1703 aa17.74■□□□□ 0.43
C3orf20-201ENST00000253697 RUSC2Q8N2Y8 1516 aa17.74■□□□□ 0.43
C3orf20-201ENST00000253697 CEP162Q5TB80 1403 aa17.69■□□□□ 0.42
C3orf20-201ENST00000253697 HNRNPUL2Q1KMD3 747 aaKnown RBP17.66■□□□□ 0.42
C3orf20-201ENST00000253697 WRNQ14191 1432 aaPredicted RBP eCLIP17.65■□□□□ 0.42
C3orf20-201ENST00000253697 APLP2Q06481 763 aa17.64■□□□□ 0.41
C3orf20-201ENST00000253697 BICRAQ9NZM4 1560 aa17.61■□□□□ 0.41
C3orf20-201ENST00000253697 BAZ1BQ9UIG0 1483 aaKnown RBP17.6■□□□□ 0.41
C3orf20-201ENST00000253697 EIF4G1Q04637 1599 aaKnown RBP17.59■□□□□ 0.41
C3orf20-201ENST00000253697 TNIKQ9UKE5 1360 aa17.53■□□□□ 0.4
C3orf20-201ENST00000253697 ATAD2BQ9ULI0 1458 aa17.52■□□□□ 0.4
C3orf20-201ENST00000253697 GOLGA3Q08378 1498 aa17.48■□□□□ 0.39
C3orf20-201ENST00000253697 EEA1Q15075 1411 aa17.44■□□□□ 0.38
C3orf20-201ENST00000253697 CLIP1P30622 1438 aa17.42■□□□□ 0.38
C3orf20-201ENST00000253697 SYNJ1O43426 1573 aa17.41■□□□□ 0.38
C3orf20-201ENST00000253697 ITGAEP38570 1179 aa17.38■□□□□ 0.37
C3orf20-201ENST00000253697 DIEXFQ68CQ4 756 aaKnown RBP17.37■□□□□ 0.37
C3orf20-201ENST00000253697 CEP164Q9UPV0 1460 aa17.36■□□□□ 0.37
C3orf20-201ENST00000253697 RAPGEF2Q9Y4G8 1499 aa17.35■□□□□ 0.37
C3orf20-201ENST00000253697 ATP1B4Q9UN42 357 aaPredicted RBP17.34■□□□□ 0.37
C3orf20-201ENST00000253697 YTHDC1Q96MU7 727 aaKnown RBP17.33■□□□□ 0.36
C3orf20-201ENST00000253697 PEG3Q9GZU2 1588 aa17.25■□□□□ 0.35
C3orf20-201ENST00000253697 P3H3Q8IVL6 736 aa17.23■□□□□ 0.35
C3orf20-201ENST00000253697 SCAF1Q9H7N4 1312 aaKnown RBP17.22■□□□□ 0.35
C3orf20-201ENST00000253697 VPS8Q8N3P4 1428 aa17.2■□□□□ 0.34
C3orf20-201ENST00000253697 KANK4Q5T7N3 995 aaPredicted RBP17.18■□□□□ 0.34
C3orf20-201ENST00000253697 ZNF316A6NFI3 1004 aaPredicted RBP17.16■□□□□ 0.34
C3orf20-201ENST00000253697 NEUROD1Q13562 356 aa17.14■□□□□ 0.34
C3orf20-201ENST00000253697 KIF27Q86VH2 1401 aa17.11■□□□□ 0.33
C3orf20-201ENST00000253697 CENPBP07199 599 aaPredicted RBP17.1■□□□□ 0.33
C3orf20-201ENST00000253697 KIF21BO75037 1637 aa17.1■□□□□ 0.33
C3orf20-201ENST00000253697 NCAPD3P42695 1498 aa17.08■□□□□ 0.33
C3orf20-201ENST00000253697 TOP2BQ02880 1626 aa17.07■□□□□ 0.32
C3orf20-201ENST00000253697 ACIN1Q9UKV3 1341 aaKnown RBP17.06■□□□□ 0.32
C3orf20-201ENST00000253697 CUX1P39880 1505 aa17.06■□□□□ 0.32
C3orf20-201ENST00000253697 CUX2O14529 1486 aa17.06■□□□□ 0.32
C3orf20-201ENST00000253697 FAM50AQ14320 339 aaKnown RBP17.03■□□□□ 0.32
C3orf20-201ENST00000253697 GTF3C3Q9Y5Q9 886 aa17.03■□□□□ 0.32
C3orf20-201ENST00000253697 MIER1Q8N108 512 aa17■□□□□ 0.31
C3orf20-201ENST00000253697 ARAP1Q96P48 1450 aa16.97■□□□□ 0.31
C3orf20-201ENST00000253697 CFTRP13569 1480 aa16.97■□□□□ 0.31
C3orf20-201ENST00000253697 PRXQ9BXM0 1461 aa16.96■□□□□ 0.31
C3orf20-201ENST00000253697 HMGXB3Q12766 1538 aa16.96■□□□□ 0.31
C3orf20-201ENST00000253697 CADPSQ9ULU8 1353 aa16.95■□□□□ 0.3
C3orf20-201ENST00000253697 CARMIL1Q5VZK9 1371 aa16.93■□□□□ 0.3
C3orf20-201ENST00000253697 IGF1RP08069 1367 aa16.9■□□□□ 0.3
C3orf20-201ENST00000253697 BIVM-ERCC5R4GMW8 1640 aa16.89■□□□□ 0.29
C3orf20-201ENST00000253697 FGD5Q6ZNL6 1462 aa16.88■□□□□ 0.29
C3orf20-201ENST00000253697 ARID3CA6NKF2 412 aa16.88■□□□□ 0.29
C3orf20-201ENST00000253697 ARHGAP35Q9NRY4 1499 aa16.85■□□□□ 0.29
C3orf20-201ENST00000253697 ERICH3Q5RHP9 1530 aa16.85■□□□□ 0.29
C3orf20-201ENST00000253697 DNAJC5BQ9UF47 199 aa16.85■□□□□ 0.29
C3orf20-201ENST00000253697 CCNB3Q8WWL7 1395 aa16.84■□□□□ 0.29
C3orf20-201ENST00000253697 NESP48681 1621 aa16.84■□□□□ 0.29
C3orf20-201ENST00000253697 RAD54L2Q9Y4B4 1467 aa16.84■□□□□ 0.29
C3orf20-201ENST00000253697 DHX57Q6P158 1386 aaKnown RBP16.82■□□□□ 0.28
C3orf20-201ENST00000253697 FANCD2Q9BXW9 1451 aa16.82■□□□□ 0.28
C3orf20-201ENST00000253697 CC2D2AQ9P2K1 1620 aa16.81■□□□□ 0.28
C3orf20-201ENST00000253697 TDRD9Q8NDG6 1382 aaKnown RBP16.78■□□□□ 0.28
C3orf20-201ENST00000253697 FHOD3Q2V2M9 1422 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms