RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 AEBP2Q6ZN18 517 aaPredicted RBP10.03□□□□□ -0.8
UFM1-201ENST00000239878 CHIC1Q5VXU3 224 aa9.47□□□□□ -0.89
UFM1-201ENST00000239878 SENP3Q9H4L4 574 aaPredicted RBP8.76□□□□□ -1.01
UFM1-201ENST00000239878 POTEDQ86YR6 584 aa8.73□□□□□ -1.01
UFM1-201ENST00000239878 NISCHQ9Y2I1 1504 aa8.64□□□□□ -1.03
UFM1-201ENST00000239878 PHF23Q9BUL5 403 aaPredicted RBP8.49□□□□□ -1.05
UFM1-201ENST00000239878 FOXD1Q16676 465 aa8.16□□□□□ -1.1
UFM1-201ENST00000239878 MSH5O43196 834 aa7.97□□□□□ -1.13
UFM1-201ENST00000239878 CCDC180Q9P1Z9 1646 aa7.76□□□□□ -1.17
UFM1-201ENST00000239878 PIAS4Q8N2W9 510 aaPredicted RBP7.47□□□□□ -1.21
UFM1-201ENST00000239878 SLC24A1O60721 1099 aa7.36□□□□□ -1.23
UFM1-201ENST00000239878 MYO15BQ96JP2 1530 aa7.3□□□□□ -1.24
UFM1-201ENST00000239878 DCAF1Q9Y4B6 1507 aa7.27□□□□□ -1.25
UFM1-201ENST00000239878 ZCCHC6Q5VYS8 1495 aaKnown RBP7.27□□□□□ -1.25
UFM1-201ENST00000239878 ABCC9O60706 1549 aa7.26□□□□□ -1.25
UFM1-201ENST00000239878 NACADO15069 1562 aa7.2□□□□□ -1.26
UFM1-201ENST00000239878 EHMT2Q96KQ7 1210 aa7.15□□□□□ -1.27
UFM1-201ENST00000239878 RB1CC1Q8TDY2 1594 aa7.14□□□□□ -1.27
UFM1-201ENST00000239878 CACNB1Q02641 598 aaPredicted RBP7.13□□□□□ -1.27
UFM1-201ENST00000239878 PPP6R1Q9UPN7 881 aa7.1□□□□□ -1.27
UFM1-201ENST00000239878 UNC13AQ9UPW8 1703 aa7.08□□□□□ -1.28
UFM1-201ENST00000239878 ADRA2BP18089 450 aa7.05□□□□□ -1.28
UFM1-201ENST00000239878 BICRAQ9NZM4 1560 aa7.03□□□□□ -1.28
UFM1-201ENST00000239878 SHROOM4Q9ULL8 1493 aa7.01□□□□□ -1.29
UFM1-201ENST00000239878 PLPPR3Q6T4P5 718 aa6.94□□□□□ -1.3
UFM1-201ENST00000239878 SCRIBQ14160 1630 aa6.91□□□□□ -1.3
UFM1-201ENST00000239878 CSRNP3Q8WYN3 585 aa6.88□□□□□ -1.31
UFM1-201ENST00000239878 RTN4Q9NQC3 1192 aaKnown RBP6.85□□□□□ -1.31
UFM1-201ENST00000239878 KCNA4P22459 653 aa6.85□□□□□ -1.31
UFM1-201ENST00000239878 DMRT2Q9Y5R5 561 aa6.85□□□□□ -1.31
UFM1-201ENST00000239878 EIF4G1Q04637 1599 aaKnown RBP6.75□□□□□ -1.33
UFM1-201ENST00000239878 PEG3Q9GZU2 1588 aa6.74□□□□□ -1.33
UFM1-201ENST00000239878 DCAF8L2P0C7V8 631 aa6.72□□□□□ -1.33
UFM1-201ENST00000239878 POTEHQ6S545 545 aa6.72□□□□□ -1.33
UFM1-201ENST00000239878 AMER1Q5JTC6 1135 aaPredicted RBP6.71□□□□□ -1.34
UFM1-201ENST00000239878 SMARCA4P51532 1647 aa6.71□□□□□ -1.34
UFM1-201ENST00000239878 PABPN1Q86U42 306 aaKnown RBP eCLIP6.7□□□□□ -1.34
UFM1-201ENST00000239878 RNF39Q9H2S5 420 aa6.7□□□□□ -1.34
UFM1-201ENST00000239878 CC2D2AQ9P2K1 1620 aa6.69□□□□□ -1.34
UFM1-201ENST00000239878 BAZ1AQ9NRL2 1556 aaPredicted RBP6.68□□□□□ -1.34
UFM1-201ENST00000239878 CECR2Q9BXF3 1484 aa6.67□□□□□ -1.34
UFM1-201ENST00000239878 HMGXB3Q12766 1538 aa6.66□□□□□ -1.34
UFM1-201ENST00000239878 MROH2BQ7Z745 1585 aa6.64□□□□□ -1.35
UFM1-201ENST00000239878 MAPK8IP2Q13387 824 aaPredicted RBP6.63□□□□□ -1.35
UFM1-201ENST00000239878 NCAPD3P42695 1498 aa6.63□□□□□ -1.35
UFM1-201ENST00000239878 SMARCA2P51531 1590 aa6.63□□□□□ -1.35
UFM1-201ENST00000239878 DNAJC5BQ9UF47 199 aa6.62□□□□□ -1.35
UFM1-201ENST00000239878 NCBP3Q53F19 620 aaKnown RBP6.61□□□□□ -1.35
UFM1-201ENST00000239878 ATAD2BQ9ULI0 1458 aa6.61□□□□□ -1.35
UFM1-201ENST00000239878 C1QBPQ07021 282 aaKnown RBP6.61□□□□□ -1.35
UFM1-201ENST00000239878 SCAF1Q9H7N4 1312 aaKnown RBP6.59□□□□□ -1.35
UFM1-201ENST00000239878 RSF1Q96T23 1441 aaPredicted RBP6.57□□□□□ -1.36
UFM1-201ENST00000239878 WIZO95785 1651 aa6.56□□□□□ -1.36
UFM1-201ENST00000239878 TOP2AP11388 1531 aaKnown RBP6.55□□□□□ -1.36
UFM1-201ENST00000239878 SLC4A1APQ9BWU0 796 aaKnown RBP6.53□□□□□ -1.36
UFM1-201ENST00000239878 BAZ1BQ9UIG0 1483 aaKnown RBP6.5□□□□□ -1.37
UFM1-201ENST00000239878 DCAF8L1A6NGE4 600 aa6.47□□□□□ -1.37
UFM1-201ENST00000239878 PRDM2Q13029 1718 aa6.46□□□□□ -1.37
UFM1-201ENST00000239878 DAXXQ9UER7 740 aaPredicted RBP6.46□□□□□ -1.38
UFM1-201ENST00000239878 LAMC3Q9Y6N6 1575 aa6.44□□□□□ -1.38
UFM1-201ENST00000239878 ZBTB22O15209 634 aa6.43□□□□□ -1.38
UFM1-201ENST00000239878 CFTRP13569 1480 aa6.41□□□□□ -1.38
UFM1-201ENST00000239878 CCDC88BA6NC98 1476 aa6.4□□□□□ -1.38
UFM1-201ENST00000239878 THOC2Q8NI27 1593 aaKnown RBP6.4□□□□□ -1.39
UFM1-201ENST00000239878 PRKCSHP14314 528 aaPredicted RBP6.4□□□□□ -1.39
UFM1-201ENST00000239878 HOXD11P31277 338 aaPredicted RBP6.37□□□□□ -1.39
UFM1-201ENST00000239878 KIF21AQ7Z4S6 1674 aa6.37□□□□□ -1.39
UFM1-201ENST00000239878 NESP48681 1621 aa6.36□□□□□ -1.39
UFM1-201ENST00000239878 CADPSQ9ULU8 1353 aa6.36□□□□□ -1.39
UFM1-201ENST00000239878 WDR62O43379 1518 aa6.34□□□□□ -1.39
UFM1-201ENST00000239878 PELP1Q8IZL8 1130 aaKnown RBP6.32□□□□□ -1.4
UFM1-201ENST00000239878 CUX2O14529 1486 aa6.3□□□□□ -1.4
UFM1-201ENST00000239878 FANCD2Q9BXW9 1451 aa6.29□□□□□ -1.4
UFM1-201ENST00000239878 MRC2Q9UBG0 1479 aa6.28□□□□□ -1.4
UFM1-201ENST00000239878 PDS5BQ9NTI5 1447 aa6.28□□□□□ -1.4
UFM1-201ENST00000239878 URB2Q14146 1524 aaKnown RBP6.28□□□□□ -1.4
UFM1-201ENST00000239878 WDR97A6NE52 1622 aa6.27□□□□□ -1.41
UFM1-201ENST00000239878 BIVM-ERCC5R4GMW8 1640 aa6.27□□□□□ -1.41
UFM1-201ENST00000239878 TAOK2Q9UL54 1235 aa6.27□□□□□ -1.41
UFM1-201ENST00000239878 DNMBPQ6XZF7 1577 aa6.27□□□□□ -1.41
UFM1-201ENST00000239878 CEP164Q9UPV0 1460 aa6.26□□□□□ -1.41
UFM1-201ENST00000239878 CUX1P39880 1505 aa6.24□□□□□ -1.41
UFM1-201ENST00000239878 TARBP1Q13395 1621 aaKnown RBP6.24□□□□□ -1.41
UFM1-201ENST00000239878 TIMELESSQ9UNS1 1208 aa6.24□□□□□ -1.41
UFM1-201ENST00000239878 TOPBP1Q92547 1522 aa6.23□□□□□ -1.41
UFM1-201ENST00000239878 TOP2BQ02880 1626 aa6.23□□□□□ -1.41
UFM1-201ENST00000239878 ABCC8Q09428 1581 aa6.23□□□□□ -1.41
UFM1-201ENST00000239878 ARXQ96QS3 562 aa6.22□□□□□ -1.41
UFM1-201ENST00000239878 ERCC6Q03468 1493 aa6.21□□□□□ -1.42
UFM1-201ENST00000239878 SYNJ1O43426 1573 aa6.21□□□□□ -1.42
UFM1-201ENST00000239878 PLCB2Q00722 1185 aa6.2□□□□□ -1.42
UFM1-201ENST00000239878 ABCA5Q8WWZ7 1642 aa6.18□□□□□ -1.42
UFM1-201ENST00000239878 POLA1P09884 1462 aaPredicted RBP6.18□□□□□ -1.42
UFM1-201ENST00000239878 NPM3O75607 178 aaKnown RBP6.18□□□□□ -1.42
UFM1-201ENST00000239878 MYT1Q01538 1121 aa6.17□□□□□ -1.42
UFM1-201ENST00000239878 BCANQ96GW7 911 aa6.17□□□□□ -1.42
UFM1-201ENST00000239878 IFT140Q96RY7 1462 aa6.17□□□□□ -1.42
UFM1-201ENST00000239878 ABCA10Q8WWZ4 1543 aa6.16□□□□□ -1.42
UFM1-201ENST00000239878 RNF216Q9NWF9 866 aaPredicted RBP6.16□□□□□ -1.42
UFM1-201ENST00000239878 EIF4G3O43432 1585 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms