RNA–Protein interactions for RNA: ENSMUST00000225246.1

Ssr1-203, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,825 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-203ENSMUST00000225246 NischQ80TM9 1593 aa24.69■■□□□ 1.54
Ssr1-203ENSMUST00000225246 Gm35339A0A140LHH9 1649 aa24.29■■□□□ 1.48
Ssr1-203ENSMUST00000225246 Abcc9P70170 1546 aa24.08■■□□□ 1.45
Ssr1-203ENSMUST00000225246 Abcc8B2RUS7 1588 aa23.43■■□□□ 1.34
Ssr1-203ENSMUST00000225246 Rtl1Q7M732 1744 aa23.34■■□□□ 1.33
Ssr1-203ENSMUST00000225246 Ccdc180J3QNE4 1664 aa22.91■■□□□ 1.26
Ssr1-203ENSMUST00000225246 Rhox8Q6VSS7 320 aa22.9■■□□□ 1.26
Ssr1-203ENSMUST00000225246 Zcchc6Q5BLK4 1491 aaKnown RBP22.34■■□□□ 1.17
Ssr1-203ENSMUST00000225246 Rpgrip1Q9EPQ2 1331 aa22.28■■□□□ 1.16
Ssr1-203ENSMUST00000225246 Dcaf1Q80TR8 1506 aa22.08■■□□□ 1.13
Ssr1-203ENSMUST00000225246 HrcG5E8J6 738 aa21.78■■□□□ 1.08
Ssr1-203ENSMUST00000225246 Acin1Q9JIX8 1338 aaKnown RBP21.69■■□□□ 1.06
Ssr1-203ENSMUST00000225246 Rb1cc1Q9ESK9 1588 aa21.64■■□□□ 1.05
Ssr1-203ENSMUST00000225246 ScribQ80U72 1612 aa21.61■■□□□ 1.05
Ssr1-203ENSMUST00000225246 Baz1aO88379 1555 aa21.47■■□□□ 1.03
Ssr1-203ENSMUST00000225246 Kdm5dQ62240 1548 aa21.28■■□□□ 1
Ssr1-203ENSMUST00000225246 Ccdc136Q3TVA9 1136 aa21.18■□□□□ 0.98
Ssr1-203ENSMUST00000225246 Crybg2B7ZCC2 1516 aa21.16■□□□□ 0.98
Ssr1-203ENSMUST00000225246 NacadQ5SWP3 1504 aa21.12■□□□□ 0.97
Ssr1-203ENSMUST00000225246 Smarca2Q6DIC0 1577 aa21.04■□□□□ 0.96
Ssr1-203ENSMUST00000225246 Trim41Q5NCC3 630 aa21.01■□□□□ 0.95
Ssr1-203ENSMUST00000225246 Ehmt2Q9Z148 1263 aaKnown RBP21.01■□□□□ 0.95
Ssr1-203ENSMUST00000225246 Cep164Q5DU05 1446 aa21■□□□□ 0.95
Ssr1-203ENSMUST00000225246 Pcgf6Q99NA9 353 aa20.88■□□□□ 0.93
Ssr1-203ENSMUST00000225246 Sycp2Q9CUU3 1500 aa20.65■□□□□ 0.9
Ssr1-203ENSMUST00000225246 Rsf1E9PWW9 1441 aaKnown RBP20.52■□□□□ 0.87
Ssr1-203ENSMUST00000225246 Brd4Q9ESU6 1400 aaKnown RBP20.51■□□□□ 0.87
Ssr1-203ENSMUST00000225246 Golga3P55937 1487 aa20.41■□□□□ 0.86
Ssr1-203ENSMUST00000225246 Supt5hO55201 1082 aaKnown RBP20.39■□□□□ 0.86
Ssr1-203ENSMUST00000225246 Chic1Q8CBW7 227 aa20.38■□□□□ 0.85
Ssr1-203ENSMUST00000225246 Cecr2E9Q2Z1 1453 aa20.31■□□□□ 0.84
Ssr1-203ENSMUST00000225246 Ccdc88bQ4QRL3 1481 aa20.31■□□□□ 0.84
Ssr1-203ENSMUST00000225246 NefmP08553 848 aa20.29■□□□□ 0.84
Ssr1-203ENSMUST00000225246 Synj1Q8CHC4 1574 aa20.25■□□□□ 0.83
Ssr1-203ENSMUST00000225246 Cngb1E1AZ71 1325 aa20.25■□□□□ 0.83
Ssr1-203ENSMUST00000225246 Top2bQ64511 1612 aa20.18■□□□□ 0.82
Ssr1-203ENSMUST00000225246 Dnajc5bQ9CQ94 199 aa20.16■□□□□ 0.82
Ssr1-203ENSMUST00000225246 CftrP26361 1476 aa20.13■□□□□ 0.81
Ssr1-203ENSMUST00000225246 Gab3Q8BSM5 595 aa20.13■□□□□ 0.81
Ssr1-203ENSMUST00000225246 BicraF8VPZ9 1578 aa20.11■□□□□ 0.81
Ssr1-203ENSMUST00000225246 Mier1Q5UAK0 511 aa20.1■□□□□ 0.81
Ssr1-203ENSMUST00000225246 Cttnbp2B9EJA2 1648 aa20.02■□□□□ 0.8
Ssr1-203ENSMUST00000225246 Neurod1Q60867 357 aa20■□□□□ 0.79
Ssr1-203ENSMUST00000225246 Rapgef2Q8CHG7 1496 aa19.93■□□□□ 0.78
Ssr1-203ENSMUST00000225246 Zeb1Q64318 1117 aa19.92■□□□□ 0.78
Ssr1-203ENSMUST00000225246 Sall2Q9QX96 1004 aa19.85■□□□□ 0.77
Ssr1-203ENSMUST00000225246 Cc2d2aQ8CFW7 1633 aa19.83■□□□□ 0.76
Ssr1-203ENSMUST00000225246 Fmn1Q05860 1466 aa19.82■□□□□ 0.76
Ssr1-203ENSMUST00000225246 Esf1Q3V1V3 845 aaKnown RBP19.81■□□□□ 0.76
Ssr1-203ENSMUST00000225246 Smarca4Q3TKT4 1613 aaKnown RBP19.81■□□□□ 0.76
Ssr1-203ENSMUST00000225246 Top2aQ01320 1528 aaKnown RBP19.8■□□□□ 0.76
Ssr1-203ENSMUST00000225246 Las1lA2BE28 776 aaKnown RBP19.76■□□□□ 0.75
Ssr1-203ENSMUST00000225246 Anks4bQ8K3X6 423 aa19.7■□□□□ 0.74
Ssr1-203ENSMUST00000225246 Cep162Q6ZQ06 1403 aa19.7■□□□□ 0.74
Ssr1-203ENSMUST00000225246 Eif4g1Q6NZJ6 1600 aaKnown RBP19.61■□□□□ 0.73
Ssr1-203ENSMUST00000225246 UbtfP25976 765 aaKnown RBP19.57■□□□□ 0.72
Ssr1-203ENSMUST00000225246 ClspnQ80YR7 1315 aa19.54■□□□□ 0.72
Ssr1-203ENSMUST00000225246 Thoc2B1AZI6 1594 aaKnown RBP19.52■□□□□ 0.71
Ssr1-203ENSMUST00000225246 Aebp2Q9Z248 504 aaKnown RBP19.5■□□□□ 0.71
Ssr1-203ENSMUST00000225246 Pds5bQ4VA53 1446 aaKnown RBP19.47■□□□□ 0.71
Ssr1-203ENSMUST00000225246 Iqgap2Q3UQ44 1575 aa19.47■□□□□ 0.71
Ssr1-203ENSMUST00000225246 Ncapd3Q6ZQK0 1506 aa19.44■□□□□ 0.7
Ssr1-203ENSMUST00000225246 TnnQ80Z71 1560 aa19.44■□□□□ 0.7
Ssr1-203ENSMUST00000225246 Wdr66E9Q743 1299 aa19.4■□□□□ 0.7
Ssr1-203ENSMUST00000225246 Clip1Q922J3 1391 aa19.4■□□□□ 0.7
Ssr1-203ENSMUST00000225246 Cdk11bP24788 784 aaKnown RBP19.38■□□□□ 0.69
Ssr1-203ENSMUST00000225246 TonslQ6NZL6 1363 aa19.37■□□□□ 0.69
Ssr1-203ENSMUST00000225246 1700123L14RikQ3V2K7 440 aa19.35■□□□□ 0.69
Ssr1-203ENSMUST00000225246 Nop58Q6DFW4 536 aaKnown RBP19.34■□□□□ 0.69
Ssr1-203ENSMUST00000225246 Atad2bE9Q166 1460 aaKnown RBP19.33■□□□□ 0.69
Ssr1-203ENSMUST00000225246 Myt1lP97500 1187 aa19.31■□□□□ 0.68
Ssr1-203ENSMUST00000225246 Csrnp3P59055 597 aa19.3■□□□□ 0.68
Ssr1-203ENSMUST00000225246 NrkQ9R0G8 1455 aa19.29■□□□□ 0.68
Ssr1-203ENSMUST00000225246 Arhgap35Q91YM2 1499 aa19.28■□□□□ 0.68
Ssr1-203ENSMUST00000225246 Aplp2Q06335 707 aa19.27■□□□□ 0.68
Ssr1-203ENSMUST00000225246 Npm2Q80W85 207 aa19.26■□□□□ 0.67
Ssr1-203ENSMUST00000225246 Kdm5bQ80Y84 1544 aa19.23■□□□□ 0.67
Ssr1-203ENSMUST00000225246 Ccdc18Q640L5 1455 aa19.22■□□□□ 0.67
Ssr1-203ENSMUST00000225246 Eea1Q8BL66 1411 aa19.18■□□□□ 0.66
Ssr1-203ENSMUST00000225246 Arap1Q4LDD4 1452 aa19.18■□□□□ 0.66
Ssr1-203ENSMUST00000225246 Plekhg3Q4VAC9 1341 aa19.18■□□□□ 0.66
Ssr1-203ENSMUST00000225246 Map3k1P53349 1493 aa19.17■□□□□ 0.66
Ssr1-203ENSMUST00000225246 Arhgef5E9Q7D5 1581 aa19.17■□□□□ 0.66
Ssr1-203ENSMUST00000225246 Lamc3Q9R0B6 1581 aa19.16■□□□□ 0.66
Ssr1-203ENSMUST00000225246 TchhA0A0B4J1F9 1599 aa19.14■□□□□ 0.66
Ssr1-203ENSMUST00000225246 PtprkP35822 1457 aa19.13■□□□□ 0.65
Ssr1-203ENSMUST00000225246 Shroom4Q1W617 1475 aa19.1■□□□□ 0.65
Ssr1-203ENSMUST00000225246 Myt1Q8CFC2 1127 aa19.07■□□□□ 0.64
Ssr1-203ENSMUST00000225246 Ercc6F8VPZ5 1481 aa19.06■□□□□ 0.64
Ssr1-203ENSMUST00000225246 Wdr62Q3U3T8 1523 aa19.05■□□□□ 0.64
Ssr1-203ENSMUST00000225246 Frmpd1A2AKB4 1549 aa19.05■□□□□ 0.64
Ssr1-203ENSMUST00000225246 Tiam1Q60610 1591 aa19.04■□□□□ 0.64
Ssr1-203ENSMUST00000225246 Camsap1A2AHC3 1581 aa19.03■□□□□ 0.64
Ssr1-203ENSMUST00000225246 Erich3F6QRE9 1637 aa19.01■□□□□ 0.63
Ssr1-203ENSMUST00000225246 Setd5Q5XJV7 1441 aa19.01■□□□□ 0.63
Ssr1-203ENSMUST00000225246 CenpbP27790 599 aa18.99■□□□□ 0.63
Ssr1-203ENSMUST00000225246 Baz1bQ9Z277 1479 aa18.97■□□□□ 0.63
Ssr1-203ENSMUST00000225246 Fam135aQ6NS59 1506 aa18.97■□□□□ 0.63
Ssr1-203ENSMUST00000225246 Ppargc1bQ8VHJ7 1014 aa18.95■□□□□ 0.62
Ssr1-203ENSMUST00000225246 AqrQ8CFQ3 1481 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms