RNA–Protein interactions for RNA: ENSMUST00000216677.1

Ncapd3-205, Transcript of Condensin-2 complex subunit D3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ncapd3, Length 5,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncapd3-205ENSMUST00000216677 Rhox8Q6VSS7 320 aa18.6■□□□□ 0.57
Ncapd3-205ENSMUST00000216677 Rpgrip1Q9EPQ2 1331 aa17.61■□□□□ 0.41
Ncapd3-205ENSMUST00000216677 Ehmt2Q9Z148 1263 aaKnown RBP16.97■□□□□ 0.31
Ncapd3-205ENSMUST00000216677 NischQ80TM9 1593 aa16.7■□□□□ 0.26
Ncapd3-205ENSMUST00000216677 Las1lA2BE28 776 aaKnown RBP16.66■□□□□ 0.26
Ncapd3-205ENSMUST00000216677 Ccdc136Q3TVA9 1136 aa16.63■□□□□ 0.25
Ncapd3-205ENSMUST00000216677 Cngb1E1AZ71 1325 aa16.47■□□□□ 0.23
Ncapd3-205ENSMUST00000216677 Acin1Q9JIX8 1338 aaKnown RBP16.42■□□□□ 0.22
Ncapd3-205ENSMUST00000216677 Wdr66E9Q743 1299 aa16.36■□□□□ 0.21
Ncapd3-205ENSMUST00000216677 Zeb1Q64318 1117 aa16.35■□□□□ 0.21
Ncapd3-205ENSMUST00000216677 Trim41Q5NCC3 630 aa16.33■□□□□ 0.2
Ncapd3-205ENSMUST00000216677 Gab3Q8BSM5 595 aa16.25■□□□□ 0.19
Ncapd3-205ENSMUST00000216677 Esf1Q3V1V3 845 aaKnown RBP16.22■□□□□ 0.19
Ncapd3-205ENSMUST00000216677 Ccdc180J3QNE4 1664 aa16.12■□□□□ 0.17
Ncapd3-205ENSMUST00000216677 HrcG5E8J6 738 aa16.04■□□□□ 0.16
Ncapd3-205ENSMUST00000216677 NefmP08553 848 aa16.04■□□□□ 0.16
Ncapd3-205ENSMUST00000216677 Pelp1Q9DBD5 1123 aaKnown RBP16■□□□□ 0.15
Ncapd3-205ENSMUST00000216677 Rtl1Q7M732 1744 aa15.93■□□□□ 0.14
Ncapd3-205ENSMUST00000216677 Pcgf6Q99NA9 353 aa15.92■□□□□ 0.14
Ncapd3-205ENSMUST00000216677 Npm2Q80W85 207 aa15.91■□□□□ 0.14
Ncapd3-205ENSMUST00000216677 CenpbP27790 599 aa15.9■□□□□ 0.14
Ncapd3-205ENSMUST00000216677 Myt1lP97500 1187 aa15.86■□□□□ 0.13
Ncapd3-205ENSMUST00000216677 Ube2uB1AUC4 352 aa15.83■□□□□ 0.13
Ncapd3-205ENSMUST00000216677 UbtfP25976 765 aaKnown RBP15.77■□□□□ 0.11
Ncapd3-205ENSMUST00000216677 Abcc9P70170 1546 aa15.67■□□□□ 0.1
Ncapd3-205ENSMUST00000216677 Cdk11bP24788 784 aaKnown RBP15.63■□□□□ 0.09
Ncapd3-205ENSMUST00000216677 Stra8P70278 393 aa15.62■□□□□ 0.09
Ncapd3-205ENSMUST00000216677 Supt5hO55201 1082 aaKnown RBP15.56■□□□□ 0.08
Ncapd3-205ENSMUST00000216677 Myt1Q8CFC2 1127 aa15.52■□□□□ 0.07
Ncapd3-205ENSMUST00000216677 Nop58Q6DFW4 536 aaKnown RBP15.47■□□□□ 0.07
Ncapd3-205ENSMUST00000216677 Tnnt3Q9QZ47 272 aa15.37■□□□□ 0.05
Ncapd3-205ENSMUST00000216677 Zcchc6Q5BLK4 1491 aaKnown RBP15.37■□□□□ 0.05
Ncapd3-205ENSMUST00000216677 Slc24a1Q91WD8 1130 aa15.36■□□□□ 0.05
Ncapd3-205ENSMUST00000216677 Mier1Q5UAK0 511 aa15.31■□□□□ 0.04
Ncapd3-205ENSMUST00000216677 Amer1Q7TS75 1132 aa15.27■□□□□ 0.03
Ncapd3-205ENSMUST00000216677 Abcc8B2RUS7 1588 aa15.26■□□□□ 0.03
Ncapd3-205ENSMUST00000216677 TonslQ6NZL6 1363 aa15.25■□□□□ 0.03
Ncapd3-205ENSMUST00000216677 Ppargc1bQ8VHJ7 1014 aa15.25■□□□□ 0.03
Ncapd3-205ENSMUST00000216677 NclP09405 707 aaKnown RBP15.18■□□□□ 0.02
Ncapd3-205ENSMUST00000216677 Il27Q8K3I6 234 aa15.18■□□□□ 0.02
Ncapd3-205ENSMUST00000216677 Dcaf1Q80TR8 1506 aa15.18■□□□□ 0.02
Ncapd3-205ENSMUST00000216677 Fam50aQ9WV03 339 aaKnown RBP15.15■□□□□ 0.02
Ncapd3-205ENSMUST00000216677 Neurod1Q60867 357 aa15.12■□□□□ 0.01
Ncapd3-205ENSMUST00000216677 NrdcQ8BHG1 1161 aa15.11■□□□□ 0.01
Ncapd3-205ENSMUST00000216677 Ap3b1Q9Z1T1 1105 aa15.11■□□□□ 0.01
Ncapd3-205ENSMUST00000216677 ClspnQ80YR7 1315 aa15.11■□□□□ 0.01
Ncapd3-205ENSMUST00000216677 Rtl5Q5DTT4 599 aa15.01□□□□□ -0.01
Ncapd3-205ENSMUST00000216677 Ttbk1Q6PCN3 1308 aa15□□□□□ -0.01
Ncapd3-205ENSMUST00000216677 Eif5bQ05D44 1216 aaKnown RBP14.99□□□□□ -0.01
Ncapd3-205ENSMUST00000216677 Sall2Q9QX96 1004 aa14.99□□□□□ -0.01
Ncapd3-205ENSMUST00000216677 Anks4bQ8K3X6 423 aa14.99□□□□□ -0.01
Ncapd3-205ENSMUST00000216677 Anp32bQ9EST5 272 aaKnown RBP14.98□□□□□ -0.01
Ncapd3-205ENSMUST00000216677 Cep164Q5DU05 1446 aa14.97□□□□□ -0.01
Ncapd3-205ENSMUST00000216677 NeflP08551 543 aa14.92□□□□□ -0.02
Ncapd3-205ENSMUST00000216677 Gm35339A0A140LHH9 1649 aa14.92□□□□□ -0.02
Ncapd3-205ENSMUST00000216677 4933416C03RikQ3V063 378 aa14.92□□□□□ -0.02
Ncapd3-205ENSMUST00000216677 Plekhg3Q4VAC9 1341 aa14.89□□□□□ -0.03
Ncapd3-205ENSMUST00000216677 Anp32aO35381 247 aa14.87□□□□□ -0.03
Ncapd3-205ENSMUST00000216677 Csrnp3P59055 597 aa14.86□□□□□ -0.03
Ncapd3-205ENSMUST00000216677 Aplp2Q06335 707 aa14.84□□□□□ -0.03
Ncapd3-205ENSMUST00000216677 Chic1Q8CBW7 227 aa14.84□□□□□ -0.03
Ncapd3-205ENSMUST00000216677 Brd4Q9ESU6 1400 aaKnown RBP14.79□□□□□ -0.04
Ncapd3-205ENSMUST00000216677 DiexfQ8BTT6 772 aaKnown RBP14.77□□□□□ -0.05
Ncapd3-205ENSMUST00000216677 Gm38655A0A286YDK6 273 aa14.73□□□□□ -0.05
Ncapd3-205ENSMUST00000216677 Lmod2Q3UHZ5 550 aa14.73□□□□□ -0.05
Ncapd3-205ENSMUST00000216677 Eid3Q3V124 375 aa14.72□□□□□ -0.05
Ncapd3-205ENSMUST00000216677 Clip1Q922J3 1391 aa14.71□□□□□ -0.05
Ncapd3-205ENSMUST00000216677 Rb1cc1Q9ESK9 1588 aa14.68□□□□□ -0.06
Ncapd3-205ENSMUST00000216677 Mapk8ip2Q9ERE9 830 aa14.67□□□□□ -0.06
Ncapd3-205ENSMUST00000216677 Os9Q8K2C7 672 aa14.62□□□□□ -0.07
Ncapd3-205ENSMUST00000216677 Npm1Q61937 292 aaKnown RBP14.59□□□□□ -0.07
Ncapd3-205ENSMUST00000216677 Ccer2J3QPU5 274 aa14.58□□□□□ -0.08
Ncapd3-205ENSMUST00000216677 4930567H17RikQ3V0K5 233 aa14.57□□□□□ -0.08
Ncapd3-205ENSMUST00000216677 1700123L14RikQ3V2K7 440 aa14.56□□□□□ -0.08
Ncapd3-205ENSMUST00000216677 Calr4Q3TQS0 420 aa14.54□□□□□ -0.08
Ncapd3-205ENSMUST00000216677 DaxxO35613 739 aa14.51□□□□□ -0.09
Ncapd3-205ENSMUST00000216677 Aebp2Q9Z248 504 aaKnown RBP14.5□□□□□ -0.09
Ncapd3-205ENSMUST00000216677 Ppp4r2Q0VGB7 417 aa14.45□□□□□ -0.1
Ncapd3-205ENSMUST00000216677 Zbtb7cQ8VCZ7 619 aa14.41□□□□□ -0.1
Ncapd3-205ENSMUST00000216677 Baz1aO88379 1555 aa14.4□□□□□ -0.1
Ncapd3-205ENSMUST00000216677 Wdr43Q6ZQL4 677 aaKnown RBP14.39□□□□□ -0.11
Ncapd3-205ENSMUST00000216677 Golga3P55937 1487 aa14.37□□□□□ -0.11
Ncapd3-205ENSMUST00000216677 Hnrnpul2Q00PI9 745 aaKnown RBP14.35□□□□□ -0.11
Ncapd3-205ENSMUST00000216677 Mrs2Q5NCE8 434 aa14.34□□□□□ -0.11
Ncapd3-205ENSMUST00000216677 BlmO88700 1416 aa14.34□□□□□ -0.11
Ncapd3-205ENSMUST00000216677 Zbtb4Q5F293 982 aa14.34□□□□□ -0.11
Ncapd3-205ENSMUST00000216677 NacadQ5SWP3 1504 aa14.32□□□□□ -0.12
Ncapd3-205ENSMUST00000216677 Upf2A2AT37 1269 aaKnown RBP14.31□□□□□ -0.12
Ncapd3-205ENSMUST00000216677 Fam71e1A1L3C1 212 aa14.31□□□□□ -0.12
Ncapd3-205ENSMUST00000216677 Nlrp6Q91WS2 869 aa14.3□□□□□ -0.12
Ncapd3-205ENSMUST00000216677 Rsf1E9PWW9 1441 aaKnown RBP14.29□□□□□ -0.12
Ncapd3-205ENSMUST00000216677 Setd5Q5XJV7 1441 aa14.29□□□□□ -0.12
Ncapd3-205ENSMUST00000216677 Chic2Q9D9G3 165 aa14.26□□□□□ -0.13
Ncapd3-205ENSMUST00000216677 Hdac5Q9Z2V6 1113 aa14.25□□□□□ -0.13
Ncapd3-205ENSMUST00000216677 Ccdc9Q8VC31 543 aaKnown RBP14.24□□□□□ -0.13
Ncapd3-205ENSMUST00000216677 Erich6D3Z6S9 713 aa14.2□□□□□ -0.14
Ncapd3-205ENSMUST00000216677 Polr3glQ8R0C0 218 aa14.18□□□□□ -0.14
Ncapd3-205ENSMUST00000216677 Hsp90aa1P07901 733 aaKnown RBP14.18□□□□□ -0.14
Ncapd3-205ENSMUST00000216677 Eea1Q8BL66 1411 aa14.17□□□□□ -0.14
Ncapd3-205ENSMUST00000216677 ArxO35085 564 aa14.16□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms