RNA–Protein interactions for RNA: ENSMUST00000212756.1

Cdc42bpa-218, Transcript of Serine/threonine-protein kinase MRCK alpha, mousemouse

TSL 5 BASIC

Gene Cdc42bpa, Length 5,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc42bpa-218ENSMUST00000212756 Rhox8Q6VSS7 320 aa14.12□□□□□ -0.15
Cdc42bpa-218ENSMUST00000212756 NischQ80TM9 1593 aa13.07□□□□□ -0.32
Cdc42bpa-218ENSMUST00000212756 Esf1Q3V1V3 845 aaKnown RBP12.68□□□□□ -0.38
Cdc42bpa-218ENSMUST00000212756 Trim41Q5NCC3 630 aa12.59□□□□□ -0.39
Cdc42bpa-218ENSMUST00000212756 Ccdc136Q3TVA9 1136 aa12.53□□□□□ -0.4
Cdc42bpa-218ENSMUST00000212756 Cngb1E1AZ71 1325 aa12.47□□□□□ -0.41
Cdc42bpa-218ENSMUST00000212756 Zeb1Q64318 1117 aa12.33□□□□□ -0.44
Cdc42bpa-218ENSMUST00000212756 Abcc9P70170 1546 aa12.28□□□□□ -0.44
Cdc42bpa-218ENSMUST00000212756 Npm2Q80W85 207 aa12.26□□□□□ -0.45
Cdc42bpa-218ENSMUST00000212756 Rpgrip1Q9EPQ2 1331 aa12.22□□□□□ -0.45
Cdc42bpa-218ENSMUST00000212756 Gab3Q8BSM5 595 aa12.07□□□□□ -0.48
Cdc42bpa-218ENSMUST00000212756 Abcc8B2RUS7 1588 aa12.05□□□□□ -0.48
Cdc42bpa-218ENSMUST00000212756 Ube2uB1AUC4 352 aa12.03□□□□□ -0.48
Cdc42bpa-218ENSMUST00000212756 Zcchc6Q5BLK4 1491 aaKnown RBP12.02□□□□□ -0.49
Cdc42bpa-218ENSMUST00000212756 Myt1lP97500 1187 aa11.98□□□□□ -0.49
Cdc42bpa-218ENSMUST00000212756 Gm35339A0A140LHH9 1649 aa11.97□□□□□ -0.49
Cdc42bpa-218ENSMUST00000212756 Las1lA2BE28 776 aaKnown RBP11.89□□□□□ -0.51
Cdc42bpa-218ENSMUST00000212756 Il27Q8K3I6 234 aa11.87□□□□□ -0.51
Cdc42bpa-218ENSMUST00000212756 Rtl1Q7M732 1744 aa11.83□□□□□ -0.52
Cdc42bpa-218ENSMUST00000212756 Ccdc180J3QNE4 1664 aa11.81□□□□□ -0.52
Cdc42bpa-218ENSMUST00000212756 HrcG5E8J6 738 aa11.81□□□□□ -0.52
Cdc42bpa-218ENSMUST00000212756 Ehmt2Q9Z148 1263 aaKnown RBP11.8□□□□□ -0.52
Cdc42bpa-218ENSMUST00000212756 Npm1Q61937 292 aaKnown RBP11.72□□□□□ -0.53
Cdc42bpa-218ENSMUST00000212756 Wdr66E9Q743 1299 aa11.64□□□□□ -0.55
Cdc42bpa-218ENSMUST00000212756 NacadQ5SWP3 1504 aa11.59□□□□□ -0.55
Cdc42bpa-218ENSMUST00000212756 Brd4Q9ESU6 1400 aaKnown RBP11.59□□□□□ -0.55
Cdc42bpa-218ENSMUST00000212756 NefmP08553 848 aa11.55□□□□□ -0.56
Cdc42bpa-218ENSMUST00000212756 UbtfP25976 765 aaKnown RBP11.53□□□□□ -0.56
Cdc42bpa-218ENSMUST00000212756 Rb1cc1Q9ESK9 1588 aa11.47□□□□□ -0.57
Cdc42bpa-218ENSMUST00000212756 Ubl4bQ9CQ84 188 aa11.44□□□□□ -0.58
Cdc42bpa-218ENSMUST00000212756 NclP09405 707 aaKnown RBP11.37□□□□□ -0.59
Cdc42bpa-218ENSMUST00000212756 Ap3b1Q9Z1T1 1105 aa11.37□□□□□ -0.59
Cdc42bpa-218ENSMUST00000212756 Stra8P70278 393 aa11.35□□□□□ -0.59
Cdc42bpa-218ENSMUST00000212756 Fam50aQ9WV03 339 aaKnown RBP11.35□□□□□ -0.59
Cdc42bpa-218ENSMUST00000212756 Ercc6F8VPZ5 1481 aa11.33□□□□□ -0.6
Cdc42bpa-218ENSMUST00000212756 Anp32bQ9EST5 272 aaKnown RBP11.3□□□□□ -0.6
Cdc42bpa-218ENSMUST00000212756 Acin1Q9JIX8 1338 aaKnown RBP11.29□□□□□ -0.6
Cdc42bpa-218ENSMUST00000212756 Dcaf1Q80TR8 1506 aa11.29□□□□□ -0.6
Cdc42bpa-218ENSMUST00000212756 Pelp1Q9DBD5 1123 aaKnown RBP11.28□□□□□ -0.6
Cdc42bpa-218ENSMUST00000212756 Hdac5Q9Z2V6 1113 aa11.27□□□□□ -0.6
Cdc42bpa-218ENSMUST00000212756 Baz1aO88379 1555 aa11.27□□□□□ -0.61
Cdc42bpa-218ENSMUST00000212756 Os9Q8K2C7 672 aa11.26□□□□□ -0.61
Cdc42bpa-218ENSMUST00000212756 Rsf1E9PWW9 1441 aaKnown RBP11.22□□□□□ -0.61
Cdc42bpa-218ENSMUST00000212756 Pds5bQ4VA53 1446 aaKnown RBP11.21□□□□□ -0.62
Cdc42bpa-218ENSMUST00000212756 Gm13697A2AK42 830 aa11.2□□□□□ -0.62
Cdc42bpa-218ENSMUST00000212756 Kdm5dQ62240 1548 aa11.18□□□□□ -0.62
Cdc42bpa-218ENSMUST00000212756 Ttbk1Q6PCN3 1308 aa11.18□□□□□ -0.62
Cdc42bpa-218ENSMUST00000212756 Lmod2Q3UHZ5 550 aa11.14□□□□□ -0.63
Cdc42bpa-218ENSMUST00000212756 Ifnlr1Q8CGK5 535 aa11.14□□□□□ -0.63
Cdc42bpa-218ENSMUST00000212756 Cdk11bP24788 784 aaKnown RBP11.13□□□□□ -0.63
Cdc42bpa-218ENSMUST00000212756 Kif15Q6P9L6 1387 aa11.13□□□□□ -0.63
Cdc42bpa-218ENSMUST00000212756 Cep164Q5DU05 1446 aa11.12□□□□□ -0.63
Cdc42bpa-218ENSMUST00000212756 Ccdc18Q640L5 1455 aa11.11□□□□□ -0.63
Cdc42bpa-218ENSMUST00000212756 Hnrnpul2Q00PI9 745 aaKnown RBP11.1□□□□□ -0.63
Cdc42bpa-218ENSMUST00000212756 Neurod1Q60867 357 aa11.09□□□□□ -0.63
Cdc42bpa-218ENSMUST00000212756 NrdcQ8BHG1 1161 aa11.08□□□□□ -0.64
Cdc42bpa-218ENSMUST00000212756 Clip1Q922J3 1391 aa11.06□□□□□ -0.64
Cdc42bpa-218ENSMUST00000212756 Slc24a1Q91WD8 1130 aa11.06□□□□□ -0.64
Cdc42bpa-218ENSMUST00000212756 Fkbp15Q6P9Q6 1216 aaKnown RBP11.05□□□□□ -0.64
Cdc42bpa-218ENSMUST00000212756 Ccer2J3QPU5 274 aa11.04□□□□□ -0.64
Cdc42bpa-218ENSMUST00000212756 Golga3P55937 1487 aa11.04□□□□□ -0.64
Cdc42bpa-218ENSMUST00000212756 Myt1Q8CFC2 1127 aa11.03□□□□□ -0.64
Cdc42bpa-218ENSMUST00000212756 Plekhg3Q4VAC9 1341 aa11.02□□□□□ -0.64
Cdc42bpa-218ENSMUST00000212756 TonslQ6NZL6 1363 aa11.01□□□□□ -0.65
Cdc42bpa-218ENSMUST00000212756 Sycp2Q9CUU3 1500 aa11.01□□□□□ -0.65
Cdc42bpa-218ENSMUST00000212756 Amer1Q7TS75 1132 aa11□□□□□ -0.65
Cdc42bpa-218ENSMUST00000212756 Clstn2Q9ER65 966 aa11□□□□□ -0.65
Cdc42bpa-218ENSMUST00000212756 Zbtb7cQ8VCZ7 619 aa10.99□□□□□ -0.65
Cdc42bpa-218ENSMUST00000212756 Chic1Q8CBW7 227 aa10.98□□□□□ -0.65
Cdc42bpa-218ENSMUST00000212756 Crybg2B7ZCC2 1516 aa10.98□□□□□ -0.65
Cdc42bpa-218ENSMUST00000212756 Gm13695A2AK44 830 aa10.97□□□□□ -0.65
Cdc42bpa-218ENSMUST00000212756 Erich6D3Z6S9 713 aa10.93□□□□□ -0.66
Cdc42bpa-218ENSMUST00000212756 CenpbP27790 599 aa10.93□□□□□ -0.66
Cdc42bpa-218ENSMUST00000212756 Atp1b4Q99ME6 356 aa10.93□□□□□ -0.66
Cdc42bpa-218ENSMUST00000212756 Safb2Q80YR5 991 aaKnown RBP10.91□□□□□ -0.66
Cdc42bpa-218ENSMUST00000212756 Mier1Q5UAK0 511 aa10.89□□□□□ -0.67
Cdc42bpa-218ENSMUST00000212756 NeflP08551 543 aa10.88□□□□□ -0.67
Cdc42bpa-218ENSMUST00000212756 Setd5Q5XJV7 1441 aa10.88□□□□□ -0.67
Cdc42bpa-218ENSMUST00000212756 Atad2bE9Q166 1460 aaKnown RBP10.87□□□□□ -0.67
Cdc42bpa-218ENSMUST00000212756 Phldb1Q6PDH0 1371 aaKnown RBP10.87□□□□□ -0.67
Cdc42bpa-218ENSMUST00000212756 Tnnt3Q9QZ47 272 aa10.85□□□□□ -0.67
Cdc42bpa-218ENSMUST00000212756 BlmO88700 1416 aa10.85□□□□□ -0.67
Cdc42bpa-218ENSMUST00000212756 Plppr3Q7TPB0 716 aa10.84□□□□□ -0.67
Cdc42bpa-218ENSMUST00000212756 Arhgap27A2AB59 869 aa10.82□□□□□ -0.68
Cdc42bpa-218ENSMUST00000212756 Eea1Q8BL66 1411 aa10.79□□□□□ -0.68
Cdc42bpa-218ENSMUST00000212756 Fmn1Q05860 1466 aa10.78□□□□□ -0.68
Cdc42bpa-218ENSMUST00000212756 Nlrp6Q91WS2 869 aa10.74□□□□□ -0.69
Cdc42bpa-218ENSMUST00000212756 Nop58Q6DFW4 536 aaKnown RBP10.73□□□□□ -0.69
Cdc42bpa-218ENSMUST00000212756 Cux2P70298 1426 aa10.73□□□□□ -0.69
Cdc42bpa-218ENSMUST00000212756 ScribQ80U72 1612 aa10.71□□□□□ -0.7
Cdc42bpa-218ENSMUST00000212756 CftrP26361 1476 aa10.7□□□□□ -0.7
Cdc42bpa-218ENSMUST00000212756 Chic2Q9D9G3 165 aa10.7□□□□□ -0.7
Cdc42bpa-218ENSMUST00000212756 Smarca4Q3TKT4 1613 aaKnown RBP10.69□□□□□ -0.7
Cdc42bpa-218ENSMUST00000212756 Pcgf6Q99NA9 353 aa10.69□□□□□ -0.7
Cdc42bpa-218ENSMUST00000212756 ClspnQ80YR7 1315 aa10.66□□□□□ -0.7
Cdc42bpa-218ENSMUST00000212756 Mtus2Q3UHD3 1353 aa10.65□□□□□ -0.7
Cdc42bpa-218ENSMUST00000212756 Ppp1r18Q8BQ30 594 aa10.65□□□□□ -0.7
Cdc42bpa-218ENSMUST00000212756 Smarca2Q6DIC0 1577 aa10.64□□□□□ -0.71
Cdc42bpa-218ENSMUST00000212756 AknaQ80VW7 1404 aa10.63□□□□□ -0.71
Cdc42bpa-218ENSMUST00000212756 Eif5bQ05D44 1216 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 79.7 ms