RNA–Protein interactions for RNA: ENSMUST00000211140.1

Ptpre-207, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ptpre, Length 5,753 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-207ENSMUST00000211140 Rhox8Q6VSS7 320 aa30.19■■■□□ 2.42
Ptpre-207ENSMUST00000211140 Rpgrip1Q9EPQ2 1331 aa28.06■■■□□ 2.08
Ptpre-207ENSMUST00000211140 Ehmt2Q9Z148 1263 aaKnown RBP27.55■■■□□ 2
Ptpre-207ENSMUST00000211140 Las1lA2BE28 776 aaKnown RBP27.12■■□□□ 1.93
Ptpre-207ENSMUST00000211140 Cngb1E1AZ71 1325 aa27.11■■□□□ 1.93
Ptpre-207ENSMUST00000211140 Wdr66E9Q743 1299 aa26.87■■□□□ 1.89
Ptpre-207ENSMUST00000211140 Ccdc136Q3TVA9 1136 aa26.7■■□□□ 1.87
Ptpre-207ENSMUST00000211140 Zeb1Q64318 1117 aa26.59■■□□□ 1.85
Ptpre-207ENSMUST00000211140 Pelp1Q9DBD5 1123 aaKnown RBP26.54■■□□□ 1.84
Ptpre-207ENSMUST00000211140 Esf1Q3V1V3 845 aaKnown RBP26.47■■□□□ 1.83
Ptpre-207ENSMUST00000211140 Ube2uB1AUC4 352 aa26.37■■□□□ 1.81
Ptpre-207ENSMUST00000211140 Gab3Q8BSM5 595 aa26.35■■□□□ 1.81
Ptpre-207ENSMUST00000211140 Trim41Q5NCC3 630 aa26.06■■□□□ 1.76
Ptpre-207ENSMUST00000211140 Npm2Q80W85 207 aa26.05■■□□□ 1.76
Ptpre-207ENSMUST00000211140 Myt1lP97500 1187 aa25.9■■□□□ 1.74
Ptpre-207ENSMUST00000211140 Acin1Q9JIX8 1338 aaKnown RBP25.87■■□□□ 1.73
Ptpre-207ENSMUST00000211140 CenpbP27790 599 aa25.85■■□□□ 1.73
Ptpre-207ENSMUST00000211140 Amer1Q7TS75 1132 aa25.66■■□□□ 1.7
Ptpre-207ENSMUST00000211140 NischQ80TM9 1593 aa25.64■■□□□ 1.7
Ptpre-207ENSMUST00000211140 NefmP08553 848 aa25.62■■□□□ 1.69
Ptpre-207ENSMUST00000211140 UbtfP25976 765 aaKnown RBP25.52■■□□□ 1.68
Ptpre-207ENSMUST00000211140 Stra8P70278 393 aa25.44■■□□□ 1.66
Ptpre-207ENSMUST00000211140 Slc24a1Q91WD8 1130 aa25.37■■□□□ 1.65
Ptpre-207ENSMUST00000211140 Cdk11bP24788 784 aaKnown RBP25.13■■□□□ 1.61
Ptpre-207ENSMUST00000211140 Ccdc180J3QNE4 1664 aa25.11■■□□□ 1.61
Ptpre-207ENSMUST00000211140 Pcgf6Q99NA9 353 aa25.07■■□□□ 1.6
Ptpre-207ENSMUST00000211140 HrcG5E8J6 738 aa24.97■■□□□ 1.59
Ptpre-207ENSMUST00000211140 Ttbk1Q6PCN3 1308 aa24.94■■□□□ 1.58
Ptpre-207ENSMUST00000211140 Nop58Q6DFW4 536 aaKnown RBP24.81■■□□□ 1.56
Ptpre-207ENSMUST00000211140 Myt1Q8CFC2 1127 aa24.81■■□□□ 1.56
Ptpre-207ENSMUST00000211140 Tnnt3Q9QZ47 272 aa24.79■■□□□ 1.56
Ptpre-207ENSMUST00000211140 Il27Q8K3I6 234 aa24.75■■□□□ 1.55
Ptpre-207ENSMUST00000211140 4933416C03RikQ3V063 378 aa24.75■■□□□ 1.55
Ptpre-207ENSMUST00000211140 NrdcQ8BHG1 1161 aa24.74■■□□□ 1.55
Ptpre-207ENSMUST00000211140 Rtl1Q7M732 1744 aa24.71■■□□□ 1.55
Ptpre-207ENSMUST00000211140 Fam50aQ9WV03 339 aaKnown RBP24.66■■□□□ 1.54
Ptpre-207ENSMUST00000211140 NclP09405 707 aaKnown RBP24.65■■□□□ 1.54
Ptpre-207ENSMUST00000211140 Ppargc1bQ8VHJ7 1014 aa24.65■■□□□ 1.54
Ptpre-207ENSMUST00000211140 4930567H17RikQ3V0K5 233 aa24.64■■□□□ 1.53
Ptpre-207ENSMUST00000211140 Neurod1Q60867 357 aa24.62■■□□□ 1.53
Ptpre-207ENSMUST00000211140 Eif5bQ05D44 1216 aaKnown RBP24.61■■□□□ 1.53
Ptpre-207ENSMUST00000211140 Anp32bQ9EST5 272 aaKnown RBP24.61■■□□□ 1.53
Ptpre-207ENSMUST00000211140 Supt5hO55201 1082 aaKnown RBP24.61■■□□□ 1.53
Ptpre-207ENSMUST00000211140 Ap3b1Q9Z1T1 1105 aa24.6■■□□□ 1.53
Ptpre-207ENSMUST00000211140 NeflP08551 543 aa24.58■■□□□ 1.52
Ptpre-207ENSMUST00000211140 TonslQ6NZL6 1363 aa24.44■■□□□ 1.5
Ptpre-207ENSMUST00000211140 Zcchc6Q5BLK4 1491 aaKnown RBP24.33■■□□□ 1.49
Ptpre-207ENSMUST00000211140 Os9Q8K2C7 672 aa24.32■■□□□ 1.48
Ptpre-207ENSMUST00000211140 Mier1Q5UAK0 511 aa24.25■■□□□ 1.47
Ptpre-207ENSMUST00000211140 Rtl5Q5DTT4 599 aa24.22■■□□□ 1.47
Ptpre-207ENSMUST00000211140 ClspnQ80YR7 1315 aa23.99■■□□□ 1.43
Ptpre-207ENSMUST00000211140 Anp32aO35381 247 aa23.93■■□□□ 1.42
Ptpre-207ENSMUST00000211140 Abcc9P70170 1546 aa23.88■■□□□ 1.41
Ptpre-207ENSMUST00000211140 Plekhg3Q4VAC9 1341 aa23.85■■□□□ 1.41
Ptpre-207ENSMUST00000211140 Lmod2Q3UHZ5 550 aa23.84■■□□□ 1.41
Ptpre-207ENSMUST00000211140 Zbtb7cQ8VCZ7 619 aa23.8■■□□□ 1.4
Ptpre-207ENSMUST00000211140 DiexfQ8BTT6 772 aaKnown RBP23.8■■□□□ 1.4
Ptpre-207ENSMUST00000211140 DaxxO35613 739 aa23.8■■□□□ 1.4
Ptpre-207ENSMUST00000211140 Gm35339A0A140LHH9 1649 aa23.78■■□□□ 1.4
Ptpre-207ENSMUST00000211140 Mapk8ip2Q9ERE9 830 aa23.68■■□□□ 1.38
Ptpre-207ENSMUST00000211140 Gm38655A0A286YDK6 273 aa23.68■■□□□ 1.38
Ptpre-207ENSMUST00000211140 Hnrnpul2Q00PI9 745 aaKnown RBP23.64■■□□□ 1.37
Ptpre-207ENSMUST00000211140 Zbtb4Q5F293 982 aa23.61■■□□□ 1.37
Ptpre-207ENSMUST00000211140 Sall2Q9QX96 1004 aa23.57■■□□□ 1.36
Ptpre-207ENSMUST00000211140 Csrnp3P59055 597 aa23.56■■□□□ 1.36
Ptpre-207ENSMUST00000211140 Npm1Q61937 292 aaKnown RBP23.55■■□□□ 1.36
Ptpre-207ENSMUST00000211140 Eid3Q3V124 375 aa23.54■■□□□ 1.36
Ptpre-207ENSMUST00000211140 Nlrp6Q91WS2 869 aa23.54■■□□□ 1.36
Ptpre-207ENSMUST00000211140 Anks4bQ8K3X6 423 aa23.53■■□□□ 1.36
Ptpre-207ENSMUST00000211140 Chic1Q8CBW7 227 aa23.51■■□□□ 1.35
Ptpre-207ENSMUST00000211140 Polr3glQ8R0C0 218 aa23.45■■□□□ 1.34
Ptpre-207ENSMUST00000211140 ArxO35085 564 aa23.43■■□□□ 1.34
Ptpre-207ENSMUST00000211140 Erich6D3Z6S9 713 aa23.42■■□□□ 1.34
Ptpre-207ENSMUST00000211140 Prdm10Q3UTQ7 1184 aa23.4■■□□□ 1.34
Ptpre-207ENSMUST00000211140 Gm13697A2AK42 830 aa23.4■■□□□ 1.34
Ptpre-207ENSMUST00000211140 Aplp2Q06335 707 aa23.38■■□□□ 1.33
Ptpre-207ENSMUST00000211140 Dcaf1Q80TR8 1506 aa23.34■■□□□ 1.33
Ptpre-207ENSMUST00000211140 Clip1Q922J3 1391 aa23.33■■□□□ 1.32
Ptpre-207ENSMUST00000211140 Atp1b4Q99ME6 356 aa23.31■■□□□ 1.32
Ptpre-207ENSMUST00000211140 Calr4Q3TQS0 420 aa23.29■■□□□ 1.32
Ptpre-207ENSMUST00000211140 Ifnlr1Q8CGK5 535 aa23.29■■□□□ 1.32
Ptpre-207ENSMUST00000211140 Ppp4r2Q0VGB7 417 aa23.27■■□□□ 1.32
Ptpre-207ENSMUST00000211140 Cep164Q5DU05 1446 aa23.22■■□□□ 1.31
Ptpre-207ENSMUST00000211140 Ccer2J3QPU5 274 aa23.16■■□□□ 1.3
Ptpre-207ENSMUST00000211140 Hdac5Q9Z2V6 1113 aa23.14■■□□□ 1.3
Ptpre-207ENSMUST00000211140 Brd4Q9ESU6 1400 aaKnown RBP23.12■■□□□ 1.29
Ptpre-207ENSMUST00000211140 Upf2A2AT37 1269 aaKnown RBP23.08■■□□□ 1.28
Ptpre-207ENSMUST00000211140 Wdr43Q6ZQL4 677 aaKnown RBP23.08■■□□□ 1.28
Ptpre-207ENSMUST00000211140 Fkbp15Q6P9Q6 1216 aaKnown RBP23.06■■□□□ 1.28
Ptpre-207ENSMUST00000211140 Abcc8B2RUS7 1588 aa23.06■■□□□ 1.28
Ptpre-207ENSMUST00000211140 Rad21Q61550 635 aaKnown RBP23.06■■□□□ 1.28
Ptpre-207ENSMUST00000211140 Gm13695A2AK44 830 aa23.03■■□□□ 1.28
Ptpre-207ENSMUST00000211140 Rangap1P46061 589 aaKnown RBP23.02■■□□□ 1.28
Ptpre-207ENSMUST00000211140 Mrs2Q5NCE8 434 aa23.02■■□□□ 1.28
Ptpre-207ENSMUST00000211140 Chic2Q9D9G3 165 aa22.95■■□□□ 1.26
Ptpre-207ENSMUST00000211140 Hsp90aa1P07901 733 aaKnown RBP22.92■■□□□ 1.26
Ptpre-207ENSMUST00000211140 CatipB9EKE5 520 aa22.89■■□□□ 1.25
Ptpre-207ENSMUST00000211140 DekQ7TNV0 380 aaKnown RBP22.83■■□□□ 1.25
Ptpre-207ENSMUST00000211140 BlmO88700 1416 aa22.81■■□□□ 1.24
Ptpre-207ENSMUST00000211140 Ccdc9Q8VC31 543 aaKnown RBP22.8■■□□□ 1.24
Retrieved 100 of 22,080 RNA–protein pairs in 42 ms