RNA–Protein interactions for RNA: ENSMUST00000211140.1

Ptpre-207, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ptpre, Length 5,753 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-207ENSMUST00000211140 Rhox8Q6VSS7 320 aa30,19■■■□□ 2,42
Ptpre-207ENSMUST00000211140 Rpgrip1Q9EPQ2 1331 aa28,06■■■□□ 2,08
Ptpre-207ENSMUST00000211140 Ehmt2Q9Z148 1263 aaKnown RBP27,55■■■□□ 2
Ptpre-207ENSMUST00000211140 Las1lA2BE28 776 aaKnown RBP27,12■■□□□ 1,93
Ptpre-207ENSMUST00000211140 Cngb1E1AZ71 1325 aa27,11■■□□□ 1,93
Ptpre-207ENSMUST00000211140 Wdr66E9Q743 1299 aa26,87■■□□□ 1,89
Ptpre-207ENSMUST00000211140 Ccdc136Q3TVA9 1136 aa26,7■■□□□ 1,87
Ptpre-207ENSMUST00000211140 Zeb1Q64318 1117 aa26,59■■□□□ 1,85
Ptpre-207ENSMUST00000211140 Pelp1Q9DBD5 1123 aaKnown RBP26,54■■□□□ 1,84
Ptpre-207ENSMUST00000211140 Esf1Q3V1V3 845 aaKnown RBP26,47■■□□□ 1,83
Ptpre-207ENSMUST00000211140 Ube2uB1AUC4 352 aa26,37■■□□□ 1,81
Ptpre-207ENSMUST00000211140 Gab3Q8BSM5 595 aa26,35■■□□□ 1,81
Ptpre-207ENSMUST00000211140 Trim41Q5NCC3 630 aa26,06■■□□□ 1,76
Ptpre-207ENSMUST00000211140 Npm2Q80W85 207 aa26,05■■□□□ 1,76
Ptpre-207ENSMUST00000211140 Myt1lP97500 1187 aa25,9■■□□□ 1,74
Ptpre-207ENSMUST00000211140 Acin1Q9JIX8 1338 aaKnown RBP25,87■■□□□ 1,73
Ptpre-207ENSMUST00000211140 CenpbP27790 599 aa25,85■■□□□ 1,73
Ptpre-207ENSMUST00000211140 Amer1Q7TS75 1132 aa25,66■■□□□ 1,7
Ptpre-207ENSMUST00000211140 NischQ80TM9 1593 aa25,64■■□□□ 1,7
Ptpre-207ENSMUST00000211140 NefmP08553 848 aa25,62■■□□□ 1,69
Ptpre-207ENSMUST00000211140 UbtfP25976 765 aaKnown RBP25,52■■□□□ 1,68
Ptpre-207ENSMUST00000211140 Stra8P70278 393 aa25,44■■□□□ 1,66
Ptpre-207ENSMUST00000211140 Slc24a1Q91WD8 1130 aa25,37■■□□□ 1,65
Ptpre-207ENSMUST00000211140 Cdk11bP24788 784 aaKnown RBP25,13■■□□□ 1,61
Ptpre-207ENSMUST00000211140 Ccdc180J3QNE4 1664 aa25,11■■□□□ 1,61
Ptpre-207ENSMUST00000211140 Pcgf6Q99NA9 353 aa25,07■■□□□ 1,6
Ptpre-207ENSMUST00000211140 HrcG5E8J6 738 aa24,97■■□□□ 1,59
Ptpre-207ENSMUST00000211140 Ttbk1Q6PCN3 1308 aa24,94■■□□□ 1,58
Ptpre-207ENSMUST00000211140 Nop58Q6DFW4 536 aaKnown RBP24,81■■□□□ 1,56
Ptpre-207ENSMUST00000211140 Myt1Q8CFC2 1127 aa24,81■■□□□ 1,56
Ptpre-207ENSMUST00000211140 Tnnt3Q9QZ47 272 aa24,79■■□□□ 1,56
Ptpre-207ENSMUST00000211140 Il27Q8K3I6 234 aa24,75■■□□□ 1,55
Ptpre-207ENSMUST00000211140 4933416C03RikQ3V063 378 aa24,75■■□□□ 1,55
Ptpre-207ENSMUST00000211140 NrdcQ8BHG1 1161 aa24,74■■□□□ 1,55
Ptpre-207ENSMUST00000211140 Rtl1Q7M732 1744 aa24,71■■□□□ 1,55
Ptpre-207ENSMUST00000211140 Fam50aQ9WV03 339 aaKnown RBP24,66■■□□□ 1,54
Ptpre-207ENSMUST00000211140 NclP09405 707 aaKnown RBP24,65■■□□□ 1,54
Ptpre-207ENSMUST00000211140 Ppargc1bQ8VHJ7 1014 aa24,65■■□□□ 1,54
Ptpre-207ENSMUST00000211140 4930567H17RikQ3V0K5 233 aa24,64■■□□□ 1,53
Ptpre-207ENSMUST00000211140 Neurod1Q60867 357 aa24,62■■□□□ 1,53
Ptpre-207ENSMUST00000211140 Eif5bQ05D44 1216 aaKnown RBP24,61■■□□□ 1,53
Ptpre-207ENSMUST00000211140 Anp32bQ9EST5 272 aaKnown RBP24,61■■□□□ 1,53
Ptpre-207ENSMUST00000211140 Supt5hO55201 1082 aaKnown RBP24,61■■□□□ 1,53
Ptpre-207ENSMUST00000211140 Ap3b1Q9Z1T1 1105 aa24,6■■□□□ 1,53
Ptpre-207ENSMUST00000211140 NeflP08551 543 aa24,58■■□□□ 1,52
Ptpre-207ENSMUST00000211140 TonslQ6NZL6 1363 aa24,44■■□□□ 1,5
Ptpre-207ENSMUST00000211140 Zcchc6Q5BLK4 1491 aaKnown RBP24,33■■□□□ 1,49
Ptpre-207ENSMUST00000211140 Os9Q8K2C7 672 aa24,32■■□□□ 1,48
Ptpre-207ENSMUST00000211140 Mier1Q5UAK0 511 aa24,25■■□□□ 1,47
Ptpre-207ENSMUST00000211140 Rtl5Q5DTT4 599 aa24,22■■□□□ 1,47
Ptpre-207ENSMUST00000211140 ClspnQ80YR7 1315 aa23,99■■□□□ 1,43
Ptpre-207ENSMUST00000211140 Anp32aO35381 247 aa23,93■■□□□ 1,42
Ptpre-207ENSMUST00000211140 Abcc9P70170 1546 aa23,88■■□□□ 1,41
Ptpre-207ENSMUST00000211140 Plekhg3Q4VAC9 1341 aa23,85■■□□□ 1,41
Ptpre-207ENSMUST00000211140 Lmod2Q3UHZ5 550 aa23,84■■□□□ 1,41
Ptpre-207ENSMUST00000211140 Zbtb7cQ8VCZ7 619 aa23,8■■□□□ 1,4
Ptpre-207ENSMUST00000211140 DiexfQ8BTT6 772 aaKnown RBP23,8■■□□□ 1,4
Ptpre-207ENSMUST00000211140 DaxxO35613 739 aa23,8■■□□□ 1,4
Ptpre-207ENSMUST00000211140 Gm35339A0A140LHH9 1649 aa23,78■■□□□ 1,4
Ptpre-207ENSMUST00000211140 Mapk8ip2Q9ERE9 830 aa23,68■■□□□ 1,38
Ptpre-207ENSMUST00000211140 Gm38655A0A286YDK6 273 aa23,68■■□□□ 1,38
Ptpre-207ENSMUST00000211140 Hnrnpul2Q00PI9 745 aaKnown RBP23,64■■□□□ 1,37
Ptpre-207ENSMUST00000211140 Zbtb4Q5F293 982 aa23,61■■□□□ 1,37
Ptpre-207ENSMUST00000211140 Sall2Q9QX96 1004 aa23,57■■□□□ 1,36
Ptpre-207ENSMUST00000211140 Csrnp3P59055 597 aa23,56■■□□□ 1,36
Ptpre-207ENSMUST00000211140 Npm1Q61937 292 aaKnown RBP23,55■■□□□ 1,36
Ptpre-207ENSMUST00000211140 Eid3Q3V124 375 aa23,54■■□□□ 1,36
Ptpre-207ENSMUST00000211140 Nlrp6Q91WS2 869 aa23,54■■□□□ 1,36
Ptpre-207ENSMUST00000211140 Anks4bQ8K3X6 423 aa23,53■■□□□ 1,36
Ptpre-207ENSMUST00000211140 Chic1Q8CBW7 227 aa23,51■■□□□ 1,35
Ptpre-207ENSMUST00000211140 Polr3glQ8R0C0 218 aa23,45■■□□□ 1,34
Ptpre-207ENSMUST00000211140 ArxO35085 564 aa23,43■■□□□ 1,34
Ptpre-207ENSMUST00000211140 Erich6D3Z6S9 713 aa23,42■■□□□ 1,34
Ptpre-207ENSMUST00000211140 Prdm10Q3UTQ7 1184 aa23,4■■□□□ 1,34
Ptpre-207ENSMUST00000211140 Gm13697A2AK42 830 aa23,4■■□□□ 1,34
Ptpre-207ENSMUST00000211140 Aplp2Q06335 707 aa23,38■■□□□ 1,33
Ptpre-207ENSMUST00000211140 Dcaf1Q80TR8 1506 aa23,34■■□□□ 1,33
Ptpre-207ENSMUST00000211140 Clip1Q922J3 1391 aa23,33■■□□□ 1,32
Ptpre-207ENSMUST00000211140 Atp1b4Q99ME6 356 aa23,31■■□□□ 1,32
Ptpre-207ENSMUST00000211140 Calr4Q3TQS0 420 aa23,29■■□□□ 1,32
Ptpre-207ENSMUST00000211140 Ifnlr1Q8CGK5 535 aa23,29■■□□□ 1,32
Ptpre-207ENSMUST00000211140 Ppp4r2Q0VGB7 417 aa23,27■■□□□ 1,32
Ptpre-207ENSMUST00000211140 Cep164Q5DU05 1446 aa23,22■■□□□ 1,31
Ptpre-207ENSMUST00000211140 Ccer2J3QPU5 274 aa23,16■■□□□ 1,3
Ptpre-207ENSMUST00000211140 Hdac5Q9Z2V6 1113 aa23,14■■□□□ 1,3
Ptpre-207ENSMUST00000211140 Brd4Q9ESU6 1400 aaKnown RBP23,12■■□□□ 1,29
Ptpre-207ENSMUST00000211140 Upf2A2AT37 1269 aaKnown RBP23,08■■□□□ 1,28
Ptpre-207ENSMUST00000211140 Wdr43Q6ZQL4 677 aaKnown RBP23,08■■□□□ 1,28
Ptpre-207ENSMUST00000211140 Fkbp15Q6P9Q6 1216 aaKnown RBP23,06■■□□□ 1,28
Ptpre-207ENSMUST00000211140 Abcc8B2RUS7 1588 aa23,06■■□□□ 1,28
Ptpre-207ENSMUST00000211140 Rad21Q61550 635 aaKnown RBP23,06■■□□□ 1,28
Ptpre-207ENSMUST00000211140 Gm13695A2AK44 830 aa23,03■■□□□ 1,28
Ptpre-207ENSMUST00000211140 Rangap1P46061 589 aaKnown RBP23,02■■□□□ 1,28
Ptpre-207ENSMUST00000211140 Mrs2Q5NCE8 434 aa23,02■■□□□ 1,28
Ptpre-207ENSMUST00000211140 Chic2Q9D9G3 165 aa22,95■■□□□ 1,26
Ptpre-207ENSMUST00000211140 Hsp90aa1P07901 733 aaKnown RBP22,92■■□□□ 1,26
Ptpre-207ENSMUST00000211140 CatipB9EKE5 520 aa22,89■■□□□ 1,25
Ptpre-207ENSMUST00000211140 DekQ7TNV0 380 aaKnown RBP22,83■■□□□ 1,25
Ptpre-207ENSMUST00000211140 BlmO88700 1416 aa22,81■■□□□ 1,24
Ptpre-207ENSMUST00000211140 Ccdc9Q8VC31 543 aaKnown RBP22,8■■□□□ 1,24
Retrieved 100 of 22,080 RNA–protein pairs in 11,3 ms