RNA–Protein interactions for RNA: ENSMUST00000204105.1

Casc1-208, Transcript of Protein CASC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Casc1, Length 2,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1-208ENSMUST00000204105 Ube2uB1AUC4 352 aa19.88■□□□□ 0.77
Casc1-208ENSMUST00000204105 DiexfQ8BTT6 772 aaKnown RBP18.73■□□□□ 0.59
Casc1-208ENSMUST00000204105 Ttbk1Q6PCN3 1308 aa18.08■□□□□ 0.49
Casc1-208ENSMUST00000204105 CatipB9EKE5 520 aa18.04■□□□□ 0.48
Casc1-208ENSMUST00000204105 Ehmt2Q9Z148 1263 aaKnown RBP17.99■□□□□ 0.47
Casc1-208ENSMUST00000204105 ArxO35085 564 aa17.66■□□□□ 0.42
Casc1-208ENSMUST00000204105 Plppr3Q7TPB0 716 aa17.5■□□□□ 0.39
Casc1-208ENSMUST00000204105 NischQ80TM9 1593 aa17.41■□□□□ 0.38
Casc1-208ENSMUST00000204105 Rhox8Q6VSS7 320 aa17.28■□□□□ 0.36
Casc1-208ENSMUST00000204105 Mapk8ip2Q9ERE9 830 aa17.23■□□□□ 0.35
Casc1-208ENSMUST00000204105 Ppargc1bQ8VHJ7 1014 aa17.16■□□□□ 0.34
Casc1-208ENSMUST00000204105 Kcna4Q61423 654 aa17.12■□□□□ 0.33
Casc1-208ENSMUST00000204105 Gm35339A0A140LHH9 1649 aa17.11■□□□□ 0.33
Casc1-208ENSMUST00000204105 Abcc9P70170 1546 aa16.93■□□□□ 0.3
Casc1-208ENSMUST00000204105 Arid3aQ62431 601 aa16.8■□□□□ 0.28
Casc1-208ENSMUST00000204105 Bcl11aQ9QYE3 773 aa16.79■□□□□ 0.28
Casc1-208ENSMUST00000204105 Prdm16A2A935 1275 aa16.66■□□□□ 0.26
Casc1-208ENSMUST00000204105 Aplp2Q06335 707 aa16.65■□□□□ 0.26
Casc1-208ENSMUST00000204105 UbtfP25976 765 aaKnown RBP16.65■□□□□ 0.26
Casc1-208ENSMUST00000204105 Taok2Q6ZQ29 1240 aa16.65■□□□□ 0.26
Casc1-208ENSMUST00000204105 Slc4a1apE9PX68 744 aa16.64■□□□□ 0.25
Casc1-208ENSMUST00000204105 Chic1Q8CBW7 227 aa16.64■□□□□ 0.25
Casc1-208ENSMUST00000204105 Vsig10D3YX43 558 aa16.58■□□□□ 0.24
Casc1-208ENSMUST00000204105 Abcc8B2RUS7 1588 aa16.52■□□□□ 0.23
Casc1-208ENSMUST00000204105 Fam71e1A1L3C1 212 aa16.48■□□□□ 0.23
Casc1-208ENSMUST00000204105 Amer1Q7TS75 1132 aa16.48■□□□□ 0.23
Casc1-208ENSMUST00000204105 Prdm10Q3UTQ7 1184 aa16.41■□□□□ 0.22
Casc1-208ENSMUST00000204105 Ncbp3Q8BZR9 615 aaKnown RBP16.35■□□□□ 0.21
Casc1-208ENSMUST00000204105 Q8BT18 775 aa16.3■□□□□ 0.2
Casc1-208ENSMUST00000204105 Rsph4aQ8BYM7 716 aa16.09■□□□□ 0.17
Casc1-208ENSMUST00000204105 Rtl1Q7M732 1744 aa16.06■□□□□ 0.16
Casc1-208ENSMUST00000204105 Npm2Q80W85 207 aa16.03■□□□□ 0.16
Casc1-208ENSMUST00000204105 Pelp1Q9DBD5 1123 aaKnown RBP16.01■□□□□ 0.15
Casc1-208ENSMUST00000204105 Myt1Q8CFC2 1127 aa15.95■□□□□ 0.14
Casc1-208ENSMUST00000204105 4930567H17RikQ3V0K5 233 aa15.93■□□□□ 0.14
Casc1-208ENSMUST00000204105 Gtf3c5Q8R2T8 520 aa15.92■□□□□ 0.14
Casc1-208ENSMUST00000204105 Ripply1Q2WG77 201 aa15.88■□□□□ 0.13
Casc1-208ENSMUST00000204105 Ecm2Q5FW85 670 aa15.82■□□□□ 0.12
Casc1-208ENSMUST00000204105 Ccdc180J3QNE4 1664 aa15.77■□□□□ 0.12
Casc1-208ENSMUST00000204105 BccipQ9CWI3 316 aa15.74■□□□□ 0.11
Casc1-208ENSMUST00000204105 TimelessQ9R1X4 1197 aa15.74■□□□□ 0.11
Casc1-208ENSMUST00000204105 PrkcshO08795 521 aa15.73■□□□□ 0.11
Casc1-208ENSMUST00000204105 Os9Q8K2C7 672 aa15.63■□□□□ 0.09
Casc1-208ENSMUST00000204105 Eif5bQ05D44 1216 aaKnown RBP15.59■□□□□ 0.09
Casc1-208ENSMUST00000204105 Phf23Q8BSN5 401 aa15.58■□□□□ 0.09
Casc1-208ENSMUST00000204105 Pde4cQ3UEI1 686 aa15.55■□□□□ 0.08
Casc1-208ENSMUST00000204105 Zcchc6Q5BLK4 1491 aaKnown RBP15.54■□□□□ 0.08
Casc1-208ENSMUST00000204105 AcrbpQ3V140 540 aa15.49■□□□□ 0.07
Casc1-208ENSMUST00000204105 ScribQ80U72 1612 aa15.42■□□□□ 0.06
Casc1-208ENSMUST00000204105 Tshz2Q68FE9 1030 aa15.42■□□□□ 0.06
Casc1-208ENSMUST00000204105 Rtn4Q99P72 1162 aaKnown RBP15.37■□□□□ 0.05
Casc1-208ENSMUST00000204105 HrcG5E8J6 738 aa15.37■□□□□ 0.05
Casc1-208ENSMUST00000204105 Dcaf1Q80TR8 1506 aa15.36■□□□□ 0.05
Casc1-208ENSMUST00000204105 Gab3Q8BSM5 595 aa15.34■□□□□ 0.05
Casc1-208ENSMUST00000204105 Dmrt2Q8BG36 561 aa15.34■□□□□ 0.05
Casc1-208ENSMUST00000204105 Ube2q2Q8K2Z8 378 aa15.34■□□□□ 0.05
Casc1-208ENSMUST00000204105 Zbtb7cQ8VCZ7 619 aa15.34■□□□□ 0.05
Casc1-208ENSMUST00000204105 Znf326O88291 580 aa15.31■□□□□ 0.04
Casc1-208ENSMUST00000204105 Rpgrip1Q9EPQ2 1331 aa15.3■□□□□ 0.04
Casc1-208ENSMUST00000204105 Rb1cc1Q9ESK9 1588 aa15.29■□□□□ 0.04
Casc1-208ENSMUST00000204105 Plcd4Q8K3R3 807 aa15.28■□□□□ 0.04
Casc1-208ENSMUST00000204105 Fbxo3Q9DC63 480 aa15.25■□□□□ 0.03
Casc1-208ENSMUST00000204105 Igsf3Q6ZQA6 1194 aa15.19■□□□□ 0.02
Casc1-208ENSMUST00000204105 Esf1Q3V1V3 845 aaKnown RBP15.13■□□□□ 0.01
Casc1-208ENSMUST00000204105 Cnksr2Q80YA9 1032 aa15.12■□□□□ 0.01
Casc1-208ENSMUST00000204105 Kdm5dQ62240 1548 aa15.11■□□□□ 0.01
Casc1-208ENSMUST00000204105 Cdk11bP24788 784 aaKnown RBP15.1■□□□□ 0.01
Casc1-208ENSMUST00000204105 CenpbP27790 599 aa15.1■□□□□ 0.01
Casc1-208ENSMUST00000204105 Nlrp6Q91WS2 869 aa15.08■□□□□ 0.01
Casc1-208ENSMUST00000204105 Baz1aO88379 1555 aa15.08■□□□□ 0.01
Casc1-208ENSMUST00000204105 4933416C03RikQ3V063 378 aa15.05■□□□□ 0
Casc1-208ENSMUST00000204105 Senp3Q9EP97 568 aaKnown RBP15.05■□□□□ -0
Casc1-208ENSMUST00000204105 Znf316Q6PGE4 1016 aa15.04■□□□□ -0
Casc1-208ENSMUST00000204105 Scaf1Q5U4C3 1256 aaKnown RBP15.04■□□□□ -0
Casc1-208ENSMUST00000204105 Stag3O70576 1240 aa15.01□□□□□ -0.01
Casc1-208ENSMUST00000204105 Ccdc136Q3TVA9 1136 aa15.01□□□□□ -0.01
Casc1-208ENSMUST00000204105 Gtf3c3Q3TMP1 882 aa15□□□□□ -0.01
Casc1-208ENSMUST00000204105 Cers3Q1A3B0 383 aa14.97□□□□□ -0.01
Casc1-208ENSMUST00000204105 Pknox2Q8BG99 474 aa14.95□□□□□ -0.02
Casc1-208ENSMUST00000204105 Irx6Q9ER75 438 aa14.92□□□□□ -0.02
Casc1-208ENSMUST00000204105 Acin1Q9JIX8 1338 aaKnown RBP14.91□□□□□ -0.02
Casc1-208ENSMUST00000204105 NacadQ5SWP3 1504 aa14.91□□□□□ -0.02
Casc1-208ENSMUST00000204105 Gm13697A2AK42 830 aa14.89□□□□□ -0.03
Casc1-208ENSMUST00000204105 Samd1D3YXK1 519 aa14.83□□□□□ -0.04
Casc1-208ENSMUST00000204105 Rad21Q61550 635 aaKnown RBP14.83□□□□□ -0.04
Casc1-208ENSMUST00000204105 MyclP10166 368 aa14.81□□□□□ -0.04
Casc1-208ENSMUST00000204105 NclP09405 707 aaKnown RBP14.8□□□□□ -0.04
Casc1-208ENSMUST00000204105 Smarca2Q6DIC0 1577 aa14.78□□□□□ -0.04
Casc1-208ENSMUST00000204105 NefmP08553 848 aa14.75□□□□□ -0.05
Casc1-208ENSMUST00000204105 Skap1Q3UUV5 355 aa14.75□□□□□ -0.05
Casc1-208ENSMUST00000204105 Arid4bA2CG63 1314 aaKnown RBP14.73□□□□□ -0.05
Casc1-208ENSMUST00000204105 Ciz1Q8VEH2 845 aa14.73□□□□□ -0.05
Casc1-208ENSMUST00000204105 Pcgf6Q99NA9 353 aa14.71□□□□□ -0.06
Casc1-208ENSMUST00000204105 Crybg2B7ZCC2 1516 aa14.7□□□□□ -0.06
Casc1-208ENSMUST00000204105 Gm38655A0A286YDK6 273 aa14.69□□□□□ -0.06
Casc1-208ENSMUST00000204105 Kiaa1211Q5PR69 1207 aa14.68□□□□□ -0.06
Casc1-208ENSMUST00000204105 Trim41Q5NCC3 630 aa14.67□□□□□ -0.06
Casc1-208ENSMUST00000204105 Prm3Q62100 101 aa14.66□□□□□ -0.06
Casc1-208ENSMUST00000204105 Zbtb38Q3LR78 1197 aa14.63□□□□□ -0.07
Casc1-208ENSMUST00000204105 Cdca7Q9D0M2 382 aa14.61□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 43.7 ms