RNA–Protein interactions for RNA: ENSMUST00000200648.1

Gm30648-202, mousemouse

TSL 1 (best) BASIC

Gene Gm30648, Length 1,957 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm30648-202ENSMUST00000200648 Ube2uB1AUC4 352 aa20.71■□□□□ 0.91
Gm30648-202ENSMUST00000200648 DiexfQ8BTT6 772 aaKnown RBP19.95■□□□□ 0.78
Gm30648-202ENSMUST00000200648 CatipB9EKE5 520 aa19.21■□□□□ 0.67
Gm30648-202ENSMUST00000200648 Mapk8ip2Q9ERE9 830 aa19.15■□□□□ 0.66
Gm30648-202ENSMUST00000200648 Ttbk1Q6PCN3 1308 aa19.14■□□□□ 0.65
Gm30648-202ENSMUST00000200648 Chic1Q8CBW7 227 aa18.88■□□□□ 0.61
Gm30648-202ENSMUST00000200648 Ehmt2Q9Z148 1263 aaKnown RBP18.73■□□□□ 0.59
Gm30648-202ENSMUST00000200648 Plppr3Q7TPB0 716 aa18.61■□□□□ 0.57
Gm30648-202ENSMUST00000200648 ArxO35085 564 aa18.61■□□□□ 0.57
Gm30648-202ENSMUST00000200648 Rhox8Q6VSS7 320 aa18.56■□□□□ 0.56
Gm30648-202ENSMUST00000200648 Amer1Q7TS75 1132 aa17.91■□□□□ 0.46
Gm30648-202ENSMUST00000200648 Bcl11aQ9QYE3 773 aa17.86■□□□□ 0.45
Gm30648-202ENSMUST00000200648 Aplp2Q06335 707 aa17.77■□□□□ 0.43
Gm30648-202ENSMUST00000200648 Kcna4Q61423 654 aa17.77■□□□□ 0.43
Gm30648-202ENSMUST00000200648 Ppargc1bQ8VHJ7 1014 aa17.63■□□□□ 0.41
Gm30648-202ENSMUST00000200648 Arid3aQ62431 601 aa17.55■□□□□ 0.4
Gm30648-202ENSMUST00000200648 Myt1Q8CFC2 1127 aa17.53■□□□□ 0.4
Gm30648-202ENSMUST00000200648 Slc4a1apE9PX68 744 aa17.52■□□□□ 0.4
Gm30648-202ENSMUST00000200648 UbtfP25976 765 aaKnown RBP17.5■□□□□ 0.39
Gm30648-202ENSMUST00000200648 Vsig10D3YX43 558 aa17.37■□□□□ 0.37
Gm30648-202ENSMUST00000200648 Taok2Q6ZQ29 1240 aa17.37■□□□□ 0.37
Gm30648-202ENSMUST00000200648 Prdm16A2A935 1275 aa17.35■□□□□ 0.37
Gm30648-202ENSMUST00000200648 Ncbp3Q8BZR9 615 aaKnown RBP17.35■□□□□ 0.37
Gm30648-202ENSMUST00000200648 Q8BT18 775 aa17.25■□□□□ 0.35
Gm30648-202ENSMUST00000200648 Gtf3c5Q8R2T8 520 aa17.15■□□□□ 0.34
Gm30648-202ENSMUST00000200648 Rsph4aQ8BYM7 716 aa17.15■□□□□ 0.34
Gm30648-202ENSMUST00000200648 Prdm10Q3UTQ7 1184 aa17.03■□□□□ 0.32
Gm30648-202ENSMUST00000200648 Fam71e1A1L3C1 212 aa17■□□□□ 0.31
Gm30648-202ENSMUST00000200648 BccipQ9CWI3 316 aa16.98■□□□□ 0.31
Gm30648-202ENSMUST00000200648 4930567H17RikQ3V0K5 233 aa16.95■□□□□ 0.3
Gm30648-202ENSMUST00000200648 TimelessQ9R1X4 1197 aa16.91■□□□□ 0.3
Gm30648-202ENSMUST00000200648 Phf23Q8BSN5 401 aa16.9■□□□□ 0.3
Gm30648-202ENSMUST00000200648 Pelp1Q9DBD5 1123 aaKnown RBP16.89■□□□□ 0.3
Gm30648-202ENSMUST00000200648 Eif5bQ05D44 1216 aaKnown RBP16.77■□□□□ 0.27
Gm30648-202ENSMUST00000200648 CenpbP27790 599 aa16.71■□□□□ 0.27
Gm30648-202ENSMUST00000200648 Ripply1Q2WG77 201 aa16.67■□□□□ 0.26
Gm30648-202ENSMUST00000200648 Npm2Q80W85 207 aa16.64■□□□□ 0.25
Gm30648-202ENSMUST00000200648 PrkcshO08795 521 aa16.61■□□□□ 0.25
Gm30648-202ENSMUST00000200648 HrcG5E8J6 738 aa16.57■□□□□ 0.24
Gm30648-202ENSMUST00000200648 Ube2q2Q8K2Z8 378 aa16.45■□□□□ 0.22
Gm30648-202ENSMUST00000200648 Pcgf6Q99NA9 353 aa16.4■□□□□ 0.22
Gm30648-202ENSMUST00000200648 Os9Q8K2C7 672 aa16.39■□□□□ 0.21
Gm30648-202ENSMUST00000200648 Znf326O88291 580 aa16.38■□□□□ 0.21
Gm30648-202ENSMUST00000200648 Cdk11bP24788 784 aaKnown RBP16.38■□□□□ 0.21
Gm30648-202ENSMUST00000200648 Ecm2Q5FW85 670 aa16.38■□□□□ 0.21
Gm30648-202ENSMUST00000200648 Pknox2Q8BG99 474 aa16.32■□□□□ 0.2
Gm30648-202ENSMUST00000200648 Znf316Q6PGE4 1016 aa16.31■□□□□ 0.2
Gm30648-202ENSMUST00000200648 Scaf1Q5U4C3 1256 aaKnown RBP16.26■□□□□ 0.19
Gm30648-202ENSMUST00000200648 Zbtb7cQ8VCZ7 619 aa16.2■□□□□ 0.18
Gm30648-202ENSMUST00000200648 Fbxo3Q9DC63 480 aa16.13■□□□□ 0.17
Gm30648-202ENSMUST00000200648 Plcd4Q8K3R3 807 aa16.11■□□□□ 0.17
Gm30648-202ENSMUST00000200648 Igsf3Q6ZQA6 1194 aa16.09■□□□□ 0.17
Gm30648-202ENSMUST00000200648 Pde4cQ3UEI1 686 aa16.01■□□□□ 0.15
Gm30648-202ENSMUST00000200648 Gm38655A0A286YDK6 273 aa15.99■□□□□ 0.15
Gm30648-202ENSMUST00000200648 AcrbpQ3V140 540 aa15.96■□□□□ 0.15
Gm30648-202ENSMUST00000200648 Cnksr2Q80YA9 1032 aa15.95■□□□□ 0.14
Gm30648-202ENSMUST00000200648 NrdcQ8BHG1 1161 aa15.95■□□□□ 0.14
Gm30648-202ENSMUST00000200648 NclP09405 707 aaKnown RBP15.93■□□□□ 0.14
Gm30648-202ENSMUST00000200648 Irx6Q9ER75 438 aa15.93■□□□□ 0.14
Gm30648-202ENSMUST00000200648 Samd1D3YXK1 519 aa15.93■□□□□ 0.14
Gm30648-202ENSMUST00000200648 Gab3Q8BSM5 595 aa15.93■□□□□ 0.14
Gm30648-202ENSMUST00000200648 4933416C03RikQ3V063 378 aa15.92■□□□□ 0.14
Gm30648-202ENSMUST00000200648 Tshz2Q68FE9 1030 aa15.89■□□□□ 0.13
Gm30648-202ENSMUST00000200648 Cers3Q1A3B0 383 aa15.87■□□□□ 0.13
Gm30648-202ENSMUST00000200648 Fgd1P52734 960 aa15.86■□□□□ 0.13
Gm30648-202ENSMUST00000200648 Rtn4Q99P72 1162 aaKnown RBP15.86■□□□□ 0.13
Gm30648-202ENSMUST00000200648 NefmP08553 848 aa15.86■□□□□ 0.13
Gm30648-202ENSMUST00000200648 Gtf3c3Q3TMP1 882 aa15.84■□□□□ 0.13
Gm30648-202ENSMUST00000200648 Las1lA2BE28 776 aaKnown RBP15.79■□□□□ 0.12
Gm30648-202ENSMUST00000200648 Esf1Q3V1V3 845 aaKnown RBP15.75■□□□□ 0.11
Gm30648-202ENSMUST00000200648 Arid4bA2CG63 1314 aaKnown RBP15.75■□□□□ 0.11
Gm30648-202ENSMUST00000200648 Skap1Q3UUV5 355 aa15.72■□□□□ 0.11
Gm30648-202ENSMUST00000200648 Rpgrip1Q9EPQ2 1331 aa15.7■□□□□ 0.1
Gm30648-202ENSMUST00000200648 Ythdc1E9Q5K9 736 aaKnown RBP15.67■□□□□ 0.1
Gm30648-202ENSMUST00000200648 Stag3O70576 1240 aa15.64■□□□□ 0.09
Gm30648-202ENSMUST00000200648 Dmrt2Q8BG36 561 aa15.64■□□□□ 0.09
Gm30648-202ENSMUST00000200648 Gm13697A2AK42 830 aa15.62■□□□□ 0.09
Gm30648-202ENSMUST00000200648 Rangap1P46061 589 aaKnown RBP15.61■□□□□ 0.09
Gm30648-202ENSMUST00000200648 Ciz1Q8VEH2 845 aa15.58■□□□□ 0.08
Gm30648-202ENSMUST00000200648 MyclP10166 368 aa15.54■□□□□ 0.08
Gm30648-202ENSMUST00000200648 Rad21Q61550 635 aaKnown RBP15.53■□□□□ 0.08
Gm30648-202ENSMUST00000200648 Nlrp6Q91WS2 869 aa15.5■□□□□ 0.07
Gm30648-202ENSMUST00000200648 Gpatch11Q3UFS4 262 aa15.49■□□□□ 0.07
Gm30648-202ENSMUST00000200648 Kiaa1211Q5PR69 1207 aa15.47■□□□□ 0.07
Gm30648-202ENSMUST00000200648 HomezQ80W88 542 aa15.47■□□□□ 0.07
Gm30648-202ENSMUST00000200648 Supt5hO55201 1082 aaKnown RBP15.41■□□□□ 0.06
Gm30648-202ENSMUST00000200648 Znf692Q3U381 531 aa15.4■□□□□ 0.06
Gm30648-202ENSMUST00000200648 Ccdc136Q3TVA9 1136 aa15.38■□□□□ 0.05
Gm30648-202ENSMUST00000200648 Hsp90b1P08113 802 aaKnown RBP15.37■□□□□ 0.05
Gm30648-202ENSMUST00000200648 Podxl2Q8CAE9 603 aa15.35■□□□□ 0.05
Gm30648-202ENSMUST00000200648 Brd2Q7JJ13 798 aaKnown RBP15.35■□□□□ 0.05
Gm30648-202ENSMUST00000200648 Gtf3c6Q9D8P7 227 aa15.35■□□□□ 0.05
Gm30648-202ENSMUST00000200648 Irx3P81067 507 aa15.33■□□□□ 0.04
Gm30648-202ENSMUST00000200648 Styxl1Q9DAR2 321 aa15.27■□□□□ 0.04
Gm30648-202ENSMUST00000200648 Hs1bp3Q3TC93 395 aa15.27■□□□□ 0.03
Gm30648-202ENSMUST00000200648 Npm1Q61937 292 aaKnown RBP15.27■□□□□ 0.03
Gm30648-202ENSMUST00000200648 Zfp777B9EKF4 885 aa15.25■□□□□ 0.03
Gm30648-202ENSMUST00000200648 DaxxO35613 739 aa15.25■□□□□ 0.03
Gm30648-202ENSMUST00000200648 Anp32bQ9EST5 272 aaKnown RBP15.24■□□□□ 0.03
Gm30648-202ENSMUST00000200648 Senp3Q9EP97 568 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms