RNA–Protein interactions for RNA: ENSMUST00000198180.4

Csde1-211, Transcript of Cold shock domain-containing protein E1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Csde1, Length 3,849 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Csde1-211ENSMUST00000198180 Rhox8Q6VSS7 320 aa14.21□□□□□ -0.13
Csde1-211ENSMUST00000198180 NischQ80TM9 1593 aa13.92□□□□□ -0.18
Csde1-211ENSMUST00000198180 Abcc9P70170 1546 aa13.23□□□□□ -0.29
Csde1-211ENSMUST00000198180 Gm35339A0A140LHH9 1649 aa13.1□□□□□ -0.31
Csde1-211ENSMUST00000198180 Abcc8B2RUS7 1588 aa13.01□□□□□ -0.33
Csde1-211ENSMUST00000198180 Ccdc136Q3TVA9 1136 aa13□□□□□ -0.33
Csde1-211ENSMUST00000198180 Ehmt2Q9Z148 1263 aaKnown RBP12.75□□□□□ -0.37
Csde1-211ENSMUST00000198180 Cngb1E1AZ71 1325 aa12.55□□□□□ -0.4
Csde1-211ENSMUST00000198180 Trim41Q5NCC3 630 aa12.52□□□□□ -0.4
Csde1-211ENSMUST00000198180 Esf1Q3V1V3 845 aaKnown RBP12.48□□□□□ -0.41
Csde1-211ENSMUST00000198180 Gab3Q8BSM5 595 aa12.44□□□□□ -0.42
Csde1-211ENSMUST00000198180 Ccdc180J3QNE4 1664 aa12.42□□□□□ -0.42
Csde1-211ENSMUST00000198180 Rtl1Q7M732 1744 aa12.4□□□□□ -0.42
Csde1-211ENSMUST00000198180 Zcchc6Q5BLK4 1491 aaKnown RBP12.4□□□□□ -0.42
Csde1-211ENSMUST00000198180 Rpgrip1Q9EPQ2 1331 aa12.28□□□□□ -0.44
Csde1-211ENSMUST00000198180 HrcG5E8J6 738 aa12.23□□□□□ -0.45
Csde1-211ENSMUST00000198180 Rb1cc1Q9ESK9 1588 aa12.2□□□□□ -0.46
Csde1-211ENSMUST00000198180 Myt1lP97500 1187 aa12.09□□□□□ -0.47
Csde1-211ENSMUST00000198180 Npm2Q80W85 207 aa12.06□□□□□ -0.48
Csde1-211ENSMUST00000198180 Acin1Q9JIX8 1338 aaKnown RBP12.03□□□□□ -0.48
Csde1-211ENSMUST00000198180 Dcaf1Q80TR8 1506 aa12.03□□□□□ -0.48
Csde1-211ENSMUST00000198180 NacadQ5SWP3 1504 aa12.03□□□□□ -0.48
Csde1-211ENSMUST00000198180 Kdm5dQ62240 1548 aa12.02□□□□□ -0.49
Csde1-211ENSMUST00000198180 Zeb1Q64318 1117 aa11.96□□□□□ -0.49
Csde1-211ENSMUST00000198180 Baz1aO88379 1555 aa11.96□□□□□ -0.5
Csde1-211ENSMUST00000198180 ScribQ80U72 1612 aa11.95□□□□□ -0.5
Csde1-211ENSMUST00000198180 Il27Q8K3I6 234 aa11.93□□□□□ -0.5
Csde1-211ENSMUST00000198180 Chic1Q8CBW7 227 aa11.9□□□□□ -0.5
Csde1-211ENSMUST00000198180 UbtfP25976 765 aaKnown RBP11.88□□□□□ -0.51
Csde1-211ENSMUST00000198180 Mapk8ip2Q9ERE9 830 aa11.84□□□□□ -0.51
Csde1-211ENSMUST00000198180 Brd4Q9ESU6 1400 aaKnown RBP11.81□□□□□ -0.52
Csde1-211ENSMUST00000198180 Wdr66E9Q743 1299 aa11.77□□□□□ -0.53
Csde1-211ENSMUST00000198180 Cep164Q5DU05 1446 aa11.72□□□□□ -0.53
Csde1-211ENSMUST00000198180 Las1lA2BE28 776 aaKnown RBP11.7□□□□□ -0.54
Csde1-211ENSMUST00000198180 Ap3b1Q9Z1T1 1105 aa11.68□□□□□ -0.54
Csde1-211ENSMUST00000198180 Sycp2Q9CUU3 1500 aa11.65□□□□□ -0.54
Csde1-211ENSMUST00000198180 Ube2uB1AUC4 352 aa11.63□□□□□ -0.55
Csde1-211ENSMUST00000198180 NefmP08553 848 aa11.63□□□□□ -0.55
Csde1-211ENSMUST00000198180 Mier1Q5UAK0 511 aa11.6□□□□□ -0.55
Csde1-211ENSMUST00000198180 Rsf1E9PWW9 1441 aaKnown RBP11.59□□□□□ -0.55
Csde1-211ENSMUST00000198180 Pcgf6Q99NA9 353 aa11.59□□□□□ -0.55
Csde1-211ENSMUST00000198180 Cecr2E9Q2Z1 1453 aa11.57□□□□□ -0.56
Csde1-211ENSMUST00000198180 Golga3P55937 1487 aa11.57□□□□□ -0.56
Csde1-211ENSMUST00000198180 Plekhg3Q4VAC9 1341 aa11.55□□□□□ -0.56
Csde1-211ENSMUST00000198180 Smarca2Q6DIC0 1577 aa11.53□□□□□ -0.56
Csde1-211ENSMUST00000198180 Crybg2B7ZCC2 1516 aa11.52□□□□□ -0.57
Csde1-211ENSMUST00000198180 Supt5hO55201 1082 aaKnown RBP11.51□□□□□ -0.57
Csde1-211ENSMUST00000198180 Ppargc1bQ8VHJ7 1014 aa11.51□□□□□ -0.57
Csde1-211ENSMUST00000198180 Ccdc88bQ4QRL3 1481 aa11.5□□□□□ -0.57
Csde1-211ENSMUST00000198180 Npm1Q61937 292 aaKnown RBP11.49□□□□□ -0.57
Csde1-211ENSMUST00000198180 Fam50aQ9WV03 339 aaKnown RBP11.45□□□□□ -0.58
Csde1-211ENSMUST00000198180 Lmod2Q3UHZ5 550 aa11.42□□□□□ -0.58
Csde1-211ENSMUST00000198180 Ubl4bQ9CQ84 188 aa11.4□□□□□ -0.58
Csde1-211ENSMUST00000198180 CftrP26361 1476 aa11.4□□□□□ -0.59
Csde1-211ENSMUST00000198180 Clip1Q922J3 1391 aa11.39□□□□□ -0.59
Csde1-211ENSMUST00000198180 Synj1Q8CHC4 1574 aa11.37□□□□□ -0.59
Csde1-211ENSMUST00000198180 Kif15Q6P9L6 1387 aa11.33□□□□□ -0.59
Csde1-211ENSMUST00000198180 Eid3Q3V124 375 aa11.31□□□□□ -0.6
Csde1-211ENSMUST00000198180 TonslQ6NZL6 1363 aa11.29□□□□□ -0.6
Csde1-211ENSMUST00000198180 Pds5bQ4VA53 1446 aaKnown RBP11.24□□□□□ -0.61
Csde1-211ENSMUST00000198180 Sall2Q9QX96 1004 aa11.22□□□□□ -0.61
Csde1-211ENSMUST00000198180 NclP09405 707 aaKnown RBP11.22□□□□□ -0.61
Csde1-211ENSMUST00000198180 Neurod1Q60867 357 aa11.22□□□□□ -0.61
Csde1-211ENSMUST00000198180 Smarca4Q3TKT4 1613 aaKnown RBP11.21□□□□□ -0.61
Csde1-211ENSMUST00000198180 Ercc6F8VPZ5 1481 aa11.21□□□□□ -0.61
Csde1-211ENSMUST00000198180 BicraF8VPZ9 1578 aa11.21□□□□□ -0.62
Csde1-211ENSMUST00000198180 Fmn1Q05860 1466 aa11.21□□□□□ -0.62
Csde1-211ENSMUST00000198180 Setd5Q5XJV7 1441 aa11.19□□□□□ -0.62
Csde1-211ENSMUST00000198180 Cdk11bP24788 784 aaKnown RBP11.17□□□□□ -0.62
Csde1-211ENSMUST00000198180 Slc24a1Q91WD8 1130 aa11.17□□□□□ -0.62
Csde1-211ENSMUST00000198180 Cep162Q6ZQ06 1403 aa11.17□□□□□ -0.62
Csde1-211ENSMUST00000198180 Atad2bE9Q166 1460 aaKnown RBP11.17□□□□□ -0.62
Csde1-211ENSMUST00000198180 Nop58Q6DFW4 536 aaKnown RBP11.16□□□□□ -0.62
Csde1-211ENSMUST00000198180 Cttnbp2B9EJA2 1648 aa11.15□□□□□ -0.62
Csde1-211ENSMUST00000198180 BlmO88700 1416 aa11.15□□□□□ -0.62
Csde1-211ENSMUST00000198180 Ccdc18Q640L5 1455 aa11.12□□□□□ -0.63
Csde1-211ENSMUST00000198180 Rapgef2Q8CHG7 1496 aa11.11□□□□□ -0.63
Csde1-211ENSMUST00000198180 Iqgap2Q3UQ44 1575 aa11.1□□□□□ -0.63
Csde1-211ENSMUST00000198180 Fkbp15Q6P9Q6 1216 aaKnown RBP11.1□□□□□ -0.63
Csde1-211ENSMUST00000198180 Zbtb7cQ8VCZ7 619 aa11.09□□□□□ -0.63
Csde1-211ENSMUST00000198180 Eea1Q8BL66 1411 aa11.09□□□□□ -0.63
Csde1-211ENSMUST00000198180 Aebp2Q9Z248 504 aaKnown RBP11.08□□□□□ -0.64
Csde1-211ENSMUST00000198180 ClspnQ80YR7 1315 aa11.08□□□□□ -0.64
Csde1-211ENSMUST00000198180 Chic2Q9D9G3 165 aa11.07□□□□□ -0.64
Csde1-211ENSMUST00000198180 Cc2d2aQ8CFW7 1633 aa11.04□□□□□ -0.64
Csde1-211ENSMUST00000198180 Ifnlr1Q8CGK5 535 aa11.02□□□□□ -0.64
Csde1-211ENSMUST00000198180 Cux2P70298 1426 aa11.02□□□□□ -0.65
Csde1-211ENSMUST00000198180 Phldb1Q6PDH0 1371 aaKnown RBP10.97□□□□□ -0.65
Csde1-211ENSMUST00000198180 Baz1bQ9Z277 1479 aa10.94□□□□□ -0.66
Csde1-211ENSMUST00000198180 Hnrnpul2Q00PI9 745 aaKnown RBP10.93□□□□□ -0.66
Csde1-211ENSMUST00000198180 Stra8P70278 393 aa10.92□□□□□ -0.66
Csde1-211ENSMUST00000198180 Top2aQ01320 1528 aaKnown RBP10.91□□□□□ -0.66
Csde1-211ENSMUST00000198180 Zbtb4Q5F293 982 aa10.91□□□□□ -0.66
Csde1-211ENSMUST00000198180 Top2bQ64511 1612 aa10.9□□□□□ -0.66
Csde1-211ENSMUST00000198180 Frmpd1A2AKB4 1549 aa10.9□□□□□ -0.66
Csde1-211ENSMUST00000198180 Arhgap27A2AB59 869 aa10.9□□□□□ -0.67
Csde1-211ENSMUST00000198180 Aebp1Q640N1 1128 aa10.88□□□□□ -0.67
Csde1-211ENSMUST00000198180 LrpprcQ6PB66 1392 aaKnown RBP10.87□□□□□ -0.67
Csde1-211ENSMUST00000198180 Ccer2J3QPU5 274 aa10.86□□□□□ -0.67
Csde1-211ENSMUST00000198180 Eif5bQ05D44 1216 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 161.2 ms