RNA–Protein interactions for RNA: ENSMUST00000197706.4

Prom1-214, Transcript of Prominin-1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prom1, Length 2,583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1-214ENSMUST00000197706 NischQ80TM9 1593 aa16.37■□□□□ 0.21
Prom1-214ENSMUST00000197706 Abcc9P70170 1546 aa15.9■□□□□ 0.14
Prom1-214ENSMUST00000197706 Gm35339A0A140LHH9 1649 aa15.89■□□□□ 0.13
Prom1-214ENSMUST00000197706 Rhox8Q6VSS7 320 aa15.5■□□□□ 0.07
Prom1-214ENSMUST00000197706 Abcc8B2RUS7 1588 aa15.48■□□□□ 0.07
Prom1-214ENSMUST00000197706 Rtl1Q7M732 1744 aa15.35■□□□□ 0.05
Prom1-214ENSMUST00000197706 Ccdc180J3QNE4 1664 aa15.19■□□□□ 0.02
Prom1-214ENSMUST00000197706 Rpgrip1Q9EPQ2 1331 aa14.91□□□□□ -0.02
Prom1-214ENSMUST00000197706 Zcchc6Q5BLK4 1491 aaKnown RBP14.85□□□□□ -0.03
Prom1-214ENSMUST00000197706 Acin1Q9JIX8 1338 aaKnown RBP14.61□□□□□ -0.07
Prom1-214ENSMUST00000197706 HrcG5E8J6 738 aa14.53□□□□□ -0.08
Prom1-214ENSMUST00000197706 Dcaf1Q80TR8 1506 aa14.46□□□□□ -0.09
Prom1-214ENSMUST00000197706 Ehmt2Q9Z148 1263 aaKnown RBP14.43□□□□□ -0.1
Prom1-214ENSMUST00000197706 Ccdc136Q3TVA9 1136 aa14.36□□□□□ -0.11
Prom1-214ENSMUST00000197706 Rb1cc1Q9ESK9 1588 aa14.35□□□□□ -0.11
Prom1-214ENSMUST00000197706 ScribQ80U72 1612 aa14.27□□□□□ -0.12
Prom1-214ENSMUST00000197706 Baz1aO88379 1555 aa14.19□□□□□ -0.14
Prom1-214ENSMUST00000197706 Pcgf6Q99NA9 353 aa14.18□□□□□ -0.14
Prom1-214ENSMUST00000197706 Trim41Q5NCC3 630 aa14.17□□□□□ -0.14
Prom1-214ENSMUST00000197706 Kdm5dQ62240 1548 aa14.09□□□□□ -0.15
Prom1-214ENSMUST00000197706 Cep164Q5DU05 1446 aa13.99□□□□□ -0.17
Prom1-214ENSMUST00000197706 NacadQ5SWP3 1504 aa13.93□□□□□ -0.18
Prom1-214ENSMUST00000197706 Smarca2Q6DIC0 1577 aa13.9□□□□□ -0.18
Prom1-214ENSMUST00000197706 Supt5hO55201 1082 aaKnown RBP13.88□□□□□ -0.19
Prom1-214ENSMUST00000197706 Crybg2B7ZCC2 1516 aa13.88□□□□□ -0.19
Prom1-214ENSMUST00000197706 Chic1Q8CBW7 227 aa13.75□□□□□ -0.21
Prom1-214ENSMUST00000197706 Rsf1E9PWW9 1441 aaKnown RBP13.73□□□□□ -0.21
Prom1-214ENSMUST00000197706 Cngb1E1AZ71 1325 aa13.7□□□□□ -0.22
Prom1-214ENSMUST00000197706 Gab3Q8BSM5 595 aa13.69□□□□□ -0.22
Prom1-214ENSMUST00000197706 Sycp2Q9CUU3 1500 aa13.63□□□□□ -0.23
Prom1-214ENSMUST00000197706 Neurod1Q60867 357 aa13.63□□□□□ -0.23
Prom1-214ENSMUST00000197706 NefmP08553 848 aa13.61□□□□□ -0.23
Prom1-214ENSMUST00000197706 Ccdc88bQ4QRL3 1481 aa13.6□□□□□ -0.23
Prom1-214ENSMUST00000197706 Zeb1Q64318 1117 aa13.6□□□□□ -0.23
Prom1-214ENSMUST00000197706 Brd4Q9ESU6 1400 aaKnown RBP13.6□□□□□ -0.23
Prom1-214ENSMUST00000197706 Mier1Q5UAK0 511 aa13.59□□□□□ -0.23
Prom1-214ENSMUST00000197706 Golga3P55937 1487 aa13.56□□□□□ -0.24
Prom1-214ENSMUST00000197706 Cecr2E9Q2Z1 1453 aa13.55□□□□□ -0.24
Prom1-214ENSMUST00000197706 Sall2Q9QX96 1004 aa13.47□□□□□ -0.25
Prom1-214ENSMUST00000197706 Synj1Q8CHC4 1574 aa13.46□□□□□ -0.25
Prom1-214ENSMUST00000197706 Esf1Q3V1V3 845 aaKnown RBP13.37□□□□□ -0.27
Prom1-214ENSMUST00000197706 CftrP26361 1476 aa13.36□□□□□ -0.27
Prom1-214ENSMUST00000197706 Las1lA2BE28 776 aaKnown RBP13.33□□□□□ -0.28
Prom1-214ENSMUST00000197706 Top2bQ64511 1612 aa13.33□□□□□ -0.28
Prom1-214ENSMUST00000197706 BicraF8VPZ9 1578 aa13.29□□□□□ -0.28
Prom1-214ENSMUST00000197706 UbtfP25976 765 aaKnown RBP13.29□□□□□ -0.28
Prom1-214ENSMUST00000197706 Anks4bQ8K3X6 423 aa13.29□□□□□ -0.28
Prom1-214ENSMUST00000197706 Rapgef2Q8CHG7 1496 aa13.25□□□□□ -0.29
Prom1-214ENSMUST00000197706 Aebp2Q9Z248 504 aaKnown RBP13.25□□□□□ -0.29
Prom1-214ENSMUST00000197706 Wdr66E9Q743 1299 aa13.22□□□□□ -0.29
Prom1-214ENSMUST00000197706 Cttnbp2B9EJA2 1648 aa13.21□□□□□ -0.29
Prom1-214ENSMUST00000197706 Cc2d2aQ8CFW7 1633 aa13.18□□□□□ -0.3
Prom1-214ENSMUST00000197706 1700123L14RikQ3V2K7 440 aa13.18□□□□□ -0.3
Prom1-214ENSMUST00000197706 Csrnp3P59055 597 aa13.17□□□□□ -0.3
Prom1-214ENSMUST00000197706 ClspnQ80YR7 1315 aa13.16□□□□□ -0.3
Prom1-214ENSMUST00000197706 Cep162Q6ZQ06 1403 aa13.14□□□□□ -0.31
Prom1-214ENSMUST00000197706 Fmn1Q05860 1466 aa13.14□□□□□ -0.31
Prom1-214ENSMUST00000197706 Top2aQ01320 1528 aaKnown RBP13.12□□□□□ -0.31
Prom1-214ENSMUST00000197706 Cdk11bP24788 784 aaKnown RBP13.12□□□□□ -0.31
Prom1-214ENSMUST00000197706 Myt1lP97500 1187 aa13.12□□□□□ -0.31
Prom1-214ENSMUST00000197706 Nop58Q6DFW4 536 aaKnown RBP13.1□□□□□ -0.31
Prom1-214ENSMUST00000197706 Smarca4Q3TKT4 1613 aaKnown RBP13.08□□□□□ -0.32
Prom1-214ENSMUST00000197706 Ppargc1bQ8VHJ7 1014 aa13.07□□□□□ -0.32
Prom1-214ENSMUST00000197706 TonslQ6NZL6 1363 aa13.06□□□□□ -0.32
Prom1-214ENSMUST00000197706 Npm2Q80W85 207 aa13.01□□□□□ -0.33
Prom1-214ENSMUST00000197706 Clip1Q922J3 1391 aa13.01□□□□□ -0.33
Prom1-214ENSMUST00000197706 Plekhg3Q4VAC9 1341 aa12.99□□□□□ -0.33
Prom1-214ENSMUST00000197706 Aplp2Q06335 707 aa12.99□□□□□ -0.33
Prom1-214ENSMUST00000197706 Ncapd3Q6ZQK0 1506 aa12.97□□□□□ -0.33
Prom1-214ENSMUST00000197706 Eif4g1Q6NZJ6 1600 aaKnown RBP12.95□□□□□ -0.34
Prom1-214ENSMUST00000197706 Iqgap2Q3UQ44 1575 aa12.88□□□□□ -0.35
Prom1-214ENSMUST00000197706 CenpbP27790 599 aa12.85□□□□□ -0.35
Prom1-214ENSMUST00000197706 Arhgap35Q91YM2 1499 aa12.84□□□□□ -0.35
Prom1-214ENSMUST00000197706 Gm38655A0A286YDK6 273 aa12.81□□□□□ -0.36
Prom1-214ENSMUST00000197706 Arap1Q4LDD4 1452 aa12.81□□□□□ -0.36
Prom1-214ENSMUST00000197706 Eea1Q8BL66 1411 aa12.8□□□□□ -0.36
Prom1-214ENSMUST00000197706 TnnQ80Z71 1560 aa12.8□□□□□ -0.36
Prom1-214ENSMUST00000197706 Kdm5bQ80Y84 1544 aa12.79□□□□□ -0.36
Prom1-214ENSMUST00000197706 Eid3Q3V124 375 aa12.79□□□□□ -0.36
Prom1-214ENSMUST00000197706 PtprkP35822 1457 aa12.79□□□□□ -0.36
Prom1-214ENSMUST00000197706 NrkQ9R0G8 1455 aa12.77□□□□□ -0.36
Prom1-214ENSMUST00000197706 Myt1Q8CFC2 1127 aa12.77□□□□□ -0.37
Prom1-214ENSMUST00000197706 Ap3b1Q9Z1T1 1105 aa12.76□□□□□ -0.37
Prom1-214ENSMUST00000197706 Atad2bE9Q166 1460 aaKnown RBP12.76□□□□□ -0.37
Prom1-214ENSMUST00000197706 Arhgef5E9Q7D5 1581 aa12.75□□□□□ -0.37
Prom1-214ENSMUST00000197706 Ccdc18Q640L5 1455 aa12.74□□□□□ -0.37
Prom1-214ENSMUST00000197706 Setd5Q5XJV7 1441 aa12.73□□□□□ -0.37
Prom1-214ENSMUST00000197706 Hnrnpul2Q00PI9 745 aaKnown RBP12.69□□□□□ -0.38
Prom1-214ENSMUST00000197706 Il27Q8K3I6 234 aa12.67□□□□□ -0.38
Prom1-214ENSMUST00000197706 Tnnt3Q9QZ47 272 aa12.67□□□□□ -0.38
Prom1-214ENSMUST00000197706 Baz1bQ9Z277 1479 aa12.67□□□□□ -0.38
Prom1-214ENSMUST00000197706 Shroom4Q1W617 1475 aa12.66□□□□□ -0.38
Prom1-214ENSMUST00000197706 Map3k1P53349 1493 aa12.66□□□□□ -0.38
Prom1-214ENSMUST00000197706 TchhA0A0B4J1F9 1599 aa12.65□□□□□ -0.38
Prom1-214ENSMUST00000197706 Tiam1Q60610 1591 aa12.65□□□□□ -0.38
Prom1-214ENSMUST00000197706 Pds5bQ4VA53 1446 aaKnown RBP12.64□□□□□ -0.39
Prom1-214ENSMUST00000197706 Lamc3Q9R0B6 1581 aa12.64□□□□□ -0.39
Prom1-214ENSMUST00000197706 Naip1Q9QWK5 1403 aa12.63□□□□□ -0.39
Prom1-214ENSMUST00000197706 SafbD3YXK2 937 aaKnown RBP12.63□□□□□ -0.39
Prom1-214ENSMUST00000197706 Frmpd1A2AKB4 1549 aa12.62□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms