RNA–Protein interactions for RNA: ENSMUST00000197488.4

Csde1-206, Transcript of Cold shock domain-containing protein E1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Csde1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Csde1-206ENSMUST00000197488 Rhox8Q6VSS7 320 aa11.58□□□□□ -0.56
Csde1-206ENSMUST00000197488 NischQ80TM9 1593 aa11.51□□□□□ -0.57
Csde1-206ENSMUST00000197488 Abcc9P70170 1546 aa11.05□□□□□ -0.64
Csde1-206ENSMUST00000197488 Ehmt2Q9Z148 1263 aaKnown RBP11.01□□□□□ -0.65
Csde1-206ENSMUST00000197488 Mapk8ip2Q9ERE9 830 aa10.94□□□□□ -0.66
Csde1-206ENSMUST00000197488 Chic1Q8CBW7 227 aa10.88□□□□□ -0.67
Csde1-206ENSMUST00000197488 Rpgrip1Q9EPQ2 1331 aa10.79□□□□□ -0.68
Csde1-206ENSMUST00000197488 Gm35339A0A140LHH9 1649 aa10.78□□□□□ -0.68
Csde1-206ENSMUST00000197488 Abcc8B2RUS7 1588 aa10.77□□□□□ -0.68
Csde1-206ENSMUST00000197488 Ccdc180J3QNE4 1664 aa10.71□□□□□ -0.69
Csde1-206ENSMUST00000197488 Ccdc136Q3TVA9 1136 aa10.69□□□□□ -0.7
Csde1-206ENSMUST00000197488 Rtl1Q7M732 1744 aa10.68□□□□□ -0.7
Csde1-206ENSMUST00000197488 Acin1Q9JIX8 1338 aaKnown RBP10.64□□□□□ -0.71
Csde1-206ENSMUST00000197488 Pcgf6Q99NA9 353 aa10.45□□□□□ -0.74
Csde1-206ENSMUST00000197488 Trim41Q5NCC3 630 aa10.42□□□□□ -0.74
Csde1-206ENSMUST00000197488 Zcchc6Q5BLK4 1491 aaKnown RBP10.39□□□□□ -0.75
Csde1-206ENSMUST00000197488 HrcG5E8J6 738 aa10.36□□□□□ -0.75
Csde1-206ENSMUST00000197488 Supt5hO55201 1082 aaKnown RBP10.29□□□□□ -0.76
Csde1-206ENSMUST00000197488 Gab3Q8BSM5 595 aa10.29□□□□□ -0.76
Csde1-206ENSMUST00000197488 Zeb1Q64318 1117 aa10.28□□□□□ -0.76
Csde1-206ENSMUST00000197488 Dcaf1Q80TR8 1506 aa10.21□□□□□ -0.77
Csde1-206ENSMUST00000197488 Cngb1E1AZ71 1325 aa10.21□□□□□ -0.78
Csde1-206ENSMUST00000197488 Rb1cc1Q9ESK9 1588 aa10.12□□□□□ -0.79
Csde1-206ENSMUST00000197488 Phf23Q8BSN5 401 aa10.1□□□□□ -0.79
Csde1-206ENSMUST00000197488 Neurod1Q60867 357 aa10.07□□□□□ -0.8
Csde1-206ENSMUST00000197488 Wdr66E9Q743 1299 aa10□□□□□ -0.81
Csde1-206ENSMUST00000197488 Mier1Q5UAK0 511 aa9.98□□□□□ -0.81
Csde1-206ENSMUST00000197488 Ppargc1bQ8VHJ7 1014 aa9.98□□□□□ -0.81
Csde1-206ENSMUST00000197488 Cep164Q5DU05 1446 aa9.96□□□□□ -0.82
Csde1-206ENSMUST00000197488 Esf1Q3V1V3 845 aaKnown RBP9.94□□□□□ -0.82
Csde1-206ENSMUST00000197488 UbtfP25976 765 aaKnown RBP9.94□□□□□ -0.82
Csde1-206ENSMUST00000197488 Sall2Q9QX96 1004 aa9.93□□□□□ -0.82
Csde1-206ENSMUST00000197488 Baz1aO88379 1555 aa9.92□□□□□ -0.82
Csde1-206ENSMUST00000197488 NefmP08553 848 aa9.91□□□□□ -0.82
Csde1-206ENSMUST00000197488 ScribQ80U72 1612 aa9.9□□□□□ -0.82
Csde1-206ENSMUST00000197488 Kdm5dQ62240 1548 aa9.88□□□□□ -0.83
Csde1-206ENSMUST00000197488 Las1lA2BE28 776 aaKnown RBP9.86□□□□□ -0.83
Csde1-206ENSMUST00000197488 Myt1lP97500 1187 aa9.86□□□□□ -0.83
Csde1-206ENSMUST00000197488 Rsf1E9PWW9 1441 aaKnown RBP9.85□□□□□ -0.83
Csde1-206ENSMUST00000197488 Csrnp3P59055 597 aa9.8□□□□□ -0.84
Csde1-206ENSMUST00000197488 Aebp2Q9Z248 504 aaKnown RBP9.76□□□□□ -0.85
Csde1-206ENSMUST00000197488 Gm38655A0A286YDK6 273 aa9.76□□□□□ -0.85
Csde1-206ENSMUST00000197488 Ccdc88bQ4QRL3 1481 aa9.75□□□□□ -0.85
Csde1-206ENSMUST00000197488 NacadQ5SWP3 1504 aa9.73□□□□□ -0.85
Csde1-206ENSMUST00000197488 1700123L14RikQ3V2K7 440 aa9.72□□□□□ -0.85
Csde1-206ENSMUST00000197488 Cdk11bP24788 784 aaKnown RBP9.71□□□□□ -0.85
Csde1-206ENSMUST00000197488 Nop58Q6DFW4 536 aaKnown RBP9.71□□□□□ -0.86
Csde1-206ENSMUST00000197488 Npm2Q80W85 207 aa9.7□□□□□ -0.86
Csde1-206ENSMUST00000197488 Anks4bQ8K3X6 423 aa9.67□□□□□ -0.86
Csde1-206ENSMUST00000197488 Smarca2Q6DIC0 1577 aa9.67□□□□□ -0.86
Csde1-206ENSMUST00000197488 Brd4Q9ESU6 1400 aaKnown RBP9.65□□□□□ -0.86
Csde1-206ENSMUST00000197488 Plekhg3Q4VAC9 1341 aa9.64□□□□□ -0.87
Csde1-206ENSMUST00000197488 Golga3P55937 1487 aa9.62□□□□□ -0.87
Csde1-206ENSMUST00000197488 Cecr2E9Q2Z1 1453 aa9.62□□□□□ -0.87
Csde1-206ENSMUST00000197488 ClspnQ80YR7 1315 aa9.6□□□□□ -0.87
Csde1-206ENSMUST00000197488 TonslQ6NZL6 1363 aa9.6□□□□□ -0.87
Csde1-206ENSMUST00000197488 Plppr3Q7TPB0 716 aa9.6□□□□□ -0.87
Csde1-206ENSMUST00000197488 Ap3b1Q9Z1T1 1105 aa9.59□□□□□ -0.87
Csde1-206ENSMUST00000197488 Eid3Q3V124 375 aa9.57□□□□□ -0.88
Csde1-206ENSMUST00000197488 CenpbP27790 599 aa9.57□□□□□ -0.88
Csde1-206ENSMUST00000197488 Il27Q8K3I6 234 aa9.5□□□□□ -0.89
Csde1-206ENSMUST00000197488 Synj1Q8CHC4 1574 aa9.5□□□□□ -0.89
Csde1-206ENSMUST00000197488 Crybg2B7ZCC2 1516 aa9.49□□□□□ -0.89
Csde1-206ENSMUST00000197488 Sycp2Q9CUU3 1500 aa9.49□□□□□ -0.89
Csde1-206ENSMUST00000197488 Clip1Q922J3 1391 aa9.46□□□□□ -0.89
Csde1-206ENSMUST00000197488 Aplp2Q06335 707 aa9.46□□□□□ -0.9
Csde1-206ENSMUST00000197488 SafbD3YXK2 937 aaKnown RBP9.42□□□□□ -0.9
Csde1-206ENSMUST00000197488 CftrP26361 1476 aa9.42□□□□□ -0.9
Csde1-206ENSMUST00000197488 Slc24a1Q91WD8 1130 aa9.41□□□□□ -0.9
Csde1-206ENSMUST00000197488 Fam50aQ9WV03 339 aaKnown RBP9.4□□□□□ -0.9
Csde1-206ENSMUST00000197488 Hnrnpul2Q00PI9 745 aaKnown RBP9.38□□□□□ -0.91
Csde1-206ENSMUST00000197488 Cep162Q6ZQ06 1403 aa9.38□□□□□ -0.91
Csde1-206ENSMUST00000197488 Rapgef2Q8CHG7 1496 aa9.37□□□□□ -0.91
Csde1-206ENSMUST00000197488 Ube2uB1AUC4 352 aa9.36□□□□□ -0.91
Csde1-206ENSMUST00000197488 NclP09405 707 aaKnown RBP9.36□□□□□ -0.91
Csde1-206ENSMUST00000197488 Lmod2Q3UHZ5 550 aa9.35□□□□□ -0.91
Csde1-206ENSMUST00000197488 Cc2d2aQ8CFW7 1633 aa9.33□□□□□ -0.92
Csde1-206ENSMUST00000197488 Fam71e1A1L3C1 212 aa9.32□□□□□ -0.92
Csde1-206ENSMUST00000197488 Tnnt3Q9QZ47 272 aa9.27□□□□□ -0.92
Csde1-206ENSMUST00000197488 Fmn1Q05860 1466 aa9.27□□□□□ -0.93
Csde1-206ENSMUST00000197488 Myt1Q8CFC2 1127 aa9.25□□□□□ -0.93
Csde1-206ENSMUST00000197488 Top2bQ64511 1612 aa9.25□□□□□ -0.93
Csde1-206ENSMUST00000197488 Eif5bQ05D44 1216 aaKnown RBP9.24□□□□□ -0.93
Csde1-206ENSMUST00000197488 Setd5Q5XJV7 1441 aa9.24□□□□□ -0.93
Csde1-206ENSMUST00000197488 BicraF8VPZ9 1578 aa9.23□□□□□ -0.93
Csde1-206ENSMUST00000197488 Cttnbp2B9EJA2 1648 aa9.22□□□□□ -0.93
Csde1-206ENSMUST00000197488 BlmO88700 1416 aa9.21□□□□□ -0.94
Csde1-206ENSMUST00000197488 Top2aQ01320 1528 aaKnown RBP9.2□□□□□ -0.94
Csde1-206ENSMUST00000197488 Ncapd3Q6ZQK0 1506 aa9.19□□□□□ -0.94
Csde1-206ENSMUST00000197488 Eea1Q8BL66 1411 aa9.19□□□□□ -0.94
Csde1-206ENSMUST00000197488 Stra8P70278 393 aa9.18□□□□□ -0.94
Csde1-206ENSMUST00000197488 Hspa5P20029 655 aaKnown RBP9.17□□□□□ -0.94
Csde1-206ENSMUST00000197488 Smarca4Q3TKT4 1613 aaKnown RBP9.15□□□□□ -0.94
Csde1-206ENSMUST00000197488 Anp32aO35381 247 aa9.15□□□□□ -0.94
Csde1-206ENSMUST00000197488 Calr4Q3TQS0 420 aa9.14□□□□□ -0.95
Csde1-206ENSMUST00000197488 Sin3aQ60520 1274 aaKnown RBP9.14□□□□□ -0.95
Csde1-206ENSMUST00000197488 DiexfQ8BTT6 772 aaKnown RBP9.14□□□□□ -0.95
Csde1-206ENSMUST00000197488 Chic2Q9D9G3 165 aa9.13□□□□□ -0.95
Csde1-206ENSMUST00000197488 Ttbk1Q6PCN3 1308 aa9.13□□□□□ -0.95
Csde1-206ENSMUST00000197488 Senp3Q9EP97 568 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 168.8 ms