RNA–Protein interactions for RNA: ENSMUST00000197407.4

Nub1-202, Transcript of NEDD8 ultimate buster 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Nub1, Length 3,546 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1-202ENSMUST00000197407 Rpgrip1Q9EPQ2 1331 aa21.92■■□□□ 1.1
Nub1-202ENSMUST00000197407 Rhox8Q6VSS7 320 aa21.65■■□□□ 1.06
Nub1-202ENSMUST00000197407 NischQ80TM9 1593 aa21.49■■□□□ 1.03
Nub1-202ENSMUST00000197407 Acin1Q9JIX8 1338 aaKnown RBP20.91■□□□□ 0.94
Nub1-202ENSMUST00000197407 Pcgf6Q99NA9 353 aa20.71■□□□□ 0.91
Nub1-202ENSMUST00000197407 Rtl1Q7M732 1744 aa20.55■□□□□ 0.88
Nub1-202ENSMUST00000197407 Ccdc180J3QNE4 1664 aa20.54■□□□□ 0.88
Nub1-202ENSMUST00000197407 Abcc9P70170 1546 aa20.52■□□□□ 0.87
Nub1-202ENSMUST00000197407 Ehmt2Q9Z148 1263 aaKnown RBP20.38■□□□□ 0.85
Nub1-202ENSMUST00000197407 Las1lA2BE28 776 aaKnown RBP20.31■□□□□ 0.84
Nub1-202ENSMUST00000197407 Abcc8B2RUS7 1588 aa20.15■□□□□ 0.82
Nub1-202ENSMUST00000197407 Gm35339A0A140LHH9 1649 aa20.04■□□□□ 0.8
Nub1-202ENSMUST00000197407 Supt5hO55201 1082 aaKnown RBP20■□□□□ 0.79
Nub1-202ENSMUST00000197407 Neurod1Q60867 357 aa19.98■□□□□ 0.79
Nub1-202ENSMUST00000197407 Ccdc136Q3TVA9 1136 aa19.95■□□□□ 0.78
Nub1-202ENSMUST00000197407 Myt1Q8CFC2 1127 aa19.89■□□□□ 0.78
Nub1-202ENSMUST00000197407 Dcaf1Q80TR8 1506 aa19.81■□□□□ 0.76
Nub1-202ENSMUST00000197407 Trim41Q5NCC3 630 aa19.81■□□□□ 0.76
Nub1-202ENSMUST00000197407 CenpbP27790 599 aa19.79■□□□□ 0.76
Nub1-202ENSMUST00000197407 HrcG5E8J6 738 aa19.69■□□□□ 0.74
Nub1-202ENSMUST00000197407 1700123L14RikQ3V2K7 440 aa19.57■□□□□ 0.72
Nub1-202ENSMUST00000197407 Zeb1Q64318 1117 aa19.5■□□□□ 0.71
Nub1-202ENSMUST00000197407 DiexfQ8BTT6 772 aaKnown RBP19.45■□□□□ 0.7
Nub1-202ENSMUST00000197407 Anks4bQ8K3X6 423 aa19.42■□□□□ 0.7
Nub1-202ENSMUST00000197407 Zcchc6Q5BLK4 1491 aaKnown RBP19.4■□□□□ 0.7
Nub1-202ENSMUST00000197407 Csrnp3P59055 597 aa19.38■□□□□ 0.69
Nub1-202ENSMUST00000197407 Cngb1E1AZ71 1325 aa19.37■□□□□ 0.69
Nub1-202ENSMUST00000197407 NefmP08553 848 aa19.26■□□□□ 0.67
Nub1-202ENSMUST00000197407 Aplp2Q06335 707 aa19.25■□□□□ 0.67
Nub1-202ENSMUST00000197407 Sall2Q9QX96 1004 aa19.16■□□□□ 0.66
Nub1-202ENSMUST00000197407 Gab3Q8BSM5 595 aa19.06■□□□□ 0.64
Nub1-202ENSMUST00000197407 Cdk11bP24788 784 aaKnown RBP19.05■□□□□ 0.64
Nub1-202ENSMUST00000197407 Bcl11aQ9QYE3 773 aa19.01■□□□□ 0.63
Nub1-202ENSMUST00000197407 Wdr66E9Q743 1299 aa18.96■□□□□ 0.63
Nub1-202ENSMUST00000197407 Nop58Q6DFW4 536 aaKnown RBP18.94■□□□□ 0.62
Nub1-202ENSMUST00000197407 Esf1Q3V1V3 845 aaKnown RBP18.88■□□□□ 0.61
Nub1-202ENSMUST00000197407 Rb1cc1Q9ESK9 1588 aa18.82■□□□□ 0.6
Nub1-202ENSMUST00000197407 Mier1Q5UAK0 511 aa18.81■□□□□ 0.6
Nub1-202ENSMUST00000197407 Gm38655A0A286YDK6 273 aa18.8■□□□□ 0.6
Nub1-202ENSMUST00000197407 ClspnQ80YR7 1315 aa18.65■□□□□ 0.58
Nub1-202ENSMUST00000197407 Cep164Q5DU05 1446 aa18.63■□□□□ 0.57
Nub1-202ENSMUST00000197407 Fam71e1A1L3C1 212 aa18.58■□□□□ 0.57
Nub1-202ENSMUST00000197407 ScribQ80U72 1612 aa18.58■□□□□ 0.57
Nub1-202ENSMUST00000197407 Amer1Q7TS75 1132 aa18.57■□□□□ 0.56
Nub1-202ENSMUST00000197407 Kdm5dQ62240 1548 aa18.56■□□□□ 0.56
Nub1-202ENSMUST00000197407 Aebp2Q9Z248 504 aaKnown RBP18.53■□□□□ 0.56
Nub1-202ENSMUST00000197407 Tnnt3Q9QZ47 272 aa18.48■□□□□ 0.55
Nub1-202ENSMUST00000197407 Ppargc1bQ8VHJ7 1014 aa18.48■□□□□ 0.55
Nub1-202ENSMUST00000197407 Chic1Q8CBW7 227 aa18.46■□□□□ 0.55
Nub1-202ENSMUST00000197407 Baz1aO88379 1555 aa18.46■□□□□ 0.54
Nub1-202ENSMUST00000197407 NacadQ5SWP3 1504 aa18.44■□□□□ 0.54
Nub1-202ENSMUST00000197407 PrkcshO08795 521 aa18.44■□□□□ 0.54
Nub1-202ENSMUST00000197407 Myt1lP97500 1187 aa18.43■□□□□ 0.54
Nub1-202ENSMUST00000197407 Pelp1Q9DBD5 1123 aaKnown RBP18.41■□□□□ 0.54
Nub1-202ENSMUST00000197407 Rtl5Q5DTT4 599 aa18.37■□□□□ 0.53
Nub1-202ENSMUST00000197407 Mapk8ip2Q9ERE9 830 aa18.35■□□□□ 0.53
Nub1-202ENSMUST00000197407 Anp32aO35381 247 aa18.28■□□□□ 0.52
Nub1-202ENSMUST00000197407 UbtfP25976 765 aaKnown RBP18.28■□□□□ 0.52
Nub1-202ENSMUST00000197407 Npm2Q80W85 207 aa18.26■□□□□ 0.51
Nub1-202ENSMUST00000197407 SafbD3YXK2 937 aaKnown RBP18.25■□□□□ 0.51
Nub1-202ENSMUST00000197407 TonslQ6NZL6 1363 aa18.22■□□□□ 0.51
Nub1-202ENSMUST00000197407 Ifnlr1Q8CGK5 535 aa18.21■□□□□ 0.51
Nub1-202ENSMUST00000197407 Hnrnpul2Q00PI9 745 aaKnown RBP18.21■□□□□ 0.51
Nub1-202ENSMUST00000197407 Il27Q8K3I6 234 aa18.1■□□□□ 0.49
Nub1-202ENSMUST00000197407 Brd4Q9ESU6 1400 aaKnown RBP18.08■□□□□ 0.49
Nub1-202ENSMUST00000197407 Stra8P70278 393 aa18.05■□□□□ 0.48
Nub1-202ENSMUST00000197407 Rsf1E9PWW9 1441 aaKnown RBP18.04■□□□□ 0.48
Nub1-202ENSMUST00000197407 Ap3b1Q9Z1T1 1105 aa17.97■□□□□ 0.47
Nub1-202ENSMUST00000197407 Cecr2E9Q2Z1 1453 aa17.96■□□□□ 0.47
Nub1-202ENSMUST00000197407 Sycp2Q9CUU3 1500 aa17.94■□□□□ 0.46
Nub1-202ENSMUST00000197407 Ttbk1Q6PCN3 1308 aa17.93■□□□□ 0.46
Nub1-202ENSMUST00000197407 Ccdc88bQ4QRL3 1481 aa17.91■□□□□ 0.46
Nub1-202ENSMUST00000197407 Smarca2Q6DIC0 1577 aa17.89■□□□□ 0.45
Nub1-202ENSMUST00000197407 Hdac5Q9Z2V6 1113 aa17.86■□□□□ 0.45
Nub1-202ENSMUST00000197407 Golga3P55937 1487 aa17.83■□□□□ 0.45
Nub1-202ENSMUST00000197407 Calr4Q3TQS0 420 aa17.83■□□□□ 0.44
Nub1-202ENSMUST00000197407 Plekhg3Q4VAC9 1341 aa17.79■□□□□ 0.44
Nub1-202ENSMUST00000197407 Nolc1E9Q5C9 702 aaKnown RBP17.78■□□□□ 0.44
Nub1-202ENSMUST00000197407 Crybg2B7ZCC2 1516 aa17.77■□□□□ 0.44
Nub1-202ENSMUST00000197407 Supt16hQ920B9 1047 aa17.76■□□□□ 0.43
Nub1-202ENSMUST00000197407 Ccdc9Q8VC31 543 aaKnown RBP17.71■□□□□ 0.43
Nub1-202ENSMUST00000197407 Upf2A2AT37 1269 aaKnown RBP17.67■□□□□ 0.42
Nub1-202ENSMUST00000197407 Znf710Q3U288 666 aa17.67■□□□□ 0.42
Nub1-202ENSMUST00000197407 Ccdc27Q3V036 639 aa17.65■□□□□ 0.42
Nub1-202ENSMUST00000197407 Ppp4r2Q0VGB7 417 aa17.64■□□□□ 0.41
Nub1-202ENSMUST00000197407 Synj1Q8CHC4 1574 aa17.63■□□□□ 0.41
Nub1-202ENSMUST00000197407 Gtf3c3Q3TMP1 882 aa17.62■□□□□ 0.41
Nub1-202ENSMUST00000197407 Wdr43Q6ZQL4 677 aaKnown RBP17.61■□□□□ 0.41
Nub1-202ENSMUST00000197407 CftrP26361 1476 aa17.6■□□□□ 0.41
Nub1-202ENSMUST00000197407 Irx3P81067 507 aa17.58■□□□□ 0.4
Nub1-202ENSMUST00000197407 NrdcQ8BHG1 1161 aa17.58■□□□□ 0.4
Nub1-202ENSMUST00000197407 Pknox2Q8BG99 474 aa17.57■□□□□ 0.4
Nub1-202ENSMUST00000197407 Fgd1P52734 960 aa17.56■□□□□ 0.4
Nub1-202ENSMUST00000197407 Ube2uB1AUC4 352 aa17.55■□□□□ 0.4
Nub1-202ENSMUST00000197407 Eid3Q3V124 375 aa17.54■□□□□ 0.4
Nub1-202ENSMUST00000197407 Slc24a1Q91WD8 1130 aa17.52■□□□□ 0.4
Nub1-202ENSMUST00000197407 Clip1Q922J3 1391 aa17.49■□□□□ 0.39
Nub1-202ENSMUST00000197407 Hsp90aa1P07901 733 aaKnown RBP17.48■□□□□ 0.39
Nub1-202ENSMUST00000197407 NclP09405 707 aaKnown RBP17.48■□□□□ 0.39
Nub1-202ENSMUST00000197407 Fam50aQ9WV03 339 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 85.6 ms