RNA–Protein interactions for RNA: ENSMUST00000192503.1

Pcdha3-201, Transcript of Protocadherin alpha 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha3, Length 5,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3-201ENSMUST00000192503 Rhox8Q6VSS7 320 aa26.66■■□□□ 1.86
Pcdha3-201ENSMUST00000192503 Rpgrip1Q9EPQ2 1331 aa25.72■■□□□ 1.71
Pcdha3-201ENSMUST00000192503 Las1lA2BE28 776 aaKnown RBP24.82■■□□□ 1.56
Pcdha3-201ENSMUST00000192503 Cngb1E1AZ71 1325 aa24.66■■□□□ 1.54
Pcdha3-201ENSMUST00000192503 Ehmt2Q9Z148 1263 aaKnown RBP24.53■■□□□ 1.52
Pcdha3-201ENSMUST00000192503 Pelp1Q9DBD5 1123 aaKnown RBP24.08■■□□□ 1.44
Pcdha3-201ENSMUST00000192503 Wdr66E9Q743 1299 aa24.02■■□□□ 1.44
Pcdha3-201ENSMUST00000192503 Zeb1Q64318 1117 aa23.82■■□□□ 1.4
Pcdha3-201ENSMUST00000192503 Acin1Q9JIX8 1338 aaKnown RBP23.59■■□□□ 1.37
Pcdha3-201ENSMUST00000192503 CenpbP27790 599 aa23.59■■□□□ 1.37
Pcdha3-201ENSMUST00000192503 Ccdc136Q3TVA9 1136 aa23.57■■□□□ 1.36
Pcdha3-201ENSMUST00000192503 Gab3Q8BSM5 595 aa23.29■■□□□ 1.32
Pcdha3-201ENSMUST00000192503 Esf1Q3V1V3 845 aaKnown RBP23.22■■□□□ 1.31
Pcdha3-201ENSMUST00000192503 Trim41Q5NCC3 630 aa23.22■■□□□ 1.31
Pcdha3-201ENSMUST00000192503 NefmP08553 848 aa23.2■■□□□ 1.3
Pcdha3-201ENSMUST00000192503 Ube2uB1AUC4 352 aa23.19■■□□□ 1.3
Pcdha3-201ENSMUST00000192503 Amer1Q7TS75 1132 aa23.17■■□□□ 1.3
Pcdha3-201ENSMUST00000192503 Myt1Q8CFC2 1127 aa23.09■■□□□ 1.29
Pcdha3-201ENSMUST00000192503 Stra8P70278 393 aa22.97■■□□□ 1.27
Pcdha3-201ENSMUST00000192503 Pcgf6Q99NA9 353 aa22.93■■□□□ 1.26
Pcdha3-201ENSMUST00000192503 Npm2Q80W85 207 aa22.93■■□□□ 1.26
Pcdha3-201ENSMUST00000192503 Myt1lP97500 1187 aa22.81■■□□□ 1.24
Pcdha3-201ENSMUST00000192503 NischQ80TM9 1593 aa22.78■■□□□ 1.24
Pcdha3-201ENSMUST00000192503 Cdk11bP24788 784 aaKnown RBP22.78■■□□□ 1.24
Pcdha3-201ENSMUST00000192503 Ccdc180J3QNE4 1664 aa22.74■■□□□ 1.23
Pcdha3-201ENSMUST00000192503 UbtfP25976 765 aaKnown RBP22.68■■□□□ 1.22
Pcdha3-201ENSMUST00000192503 HrcG5E8J6 738 aa22.61■■□□□ 1.21
Pcdha3-201ENSMUST00000192503 Tnnt3Q9QZ47 272 aa22.54■■□□□ 1.2
Pcdha3-201ENSMUST00000192503 Slc24a1Q91WD8 1130 aa22.53■■□□□ 1.2
Pcdha3-201ENSMUST00000192503 Nop58Q6DFW4 536 aaKnown RBP22.47■■□□□ 1.19
Pcdha3-201ENSMUST00000192503 Ttbk1Q6PCN3 1308 aa22.43■■□□□ 1.18
Pcdha3-201ENSMUST00000192503 Rtl1Q7M732 1744 aa22.39■■□□□ 1.17
Pcdha3-201ENSMUST00000192503 Supt5hO55201 1082 aaKnown RBP22.36■■□□□ 1.17
Pcdha3-201ENSMUST00000192503 4933416C03RikQ3V063 378 aa22.33■■□□□ 1.16
Pcdha3-201ENSMUST00000192503 4930567H17RikQ3V0K5 233 aa22.3■■□□□ 1.16
Pcdha3-201ENSMUST00000192503 Rtl5Q5DTT4 599 aa22.23■■□□□ 1.15
Pcdha3-201ENSMUST00000192503 NrdcQ8BHG1 1161 aa22.13■■□□□ 1.13
Pcdha3-201ENSMUST00000192503 DiexfQ8BTT6 772 aaKnown RBP22.08■■□□□ 1.13
Pcdha3-201ENSMUST00000192503 NeflP08551 543 aa22.02■■□□□ 1.12
Pcdha3-201ENSMUST00000192503 NclP09405 707 aaKnown RBP21.99■■□□□ 1.11
Pcdha3-201ENSMUST00000192503 Ppargc1bQ8VHJ7 1014 aa21.98■■□□□ 1.11
Pcdha3-201ENSMUST00000192503 Anp32bQ9EST5 272 aaKnown RBP21.97■■□□□ 1.11
Pcdha3-201ENSMUST00000192503 Eif5bQ05D44 1216 aaKnown RBP21.96■■□□□ 1.11
Pcdha3-201ENSMUST00000192503 TonslQ6NZL6 1363 aa21.96■■□□□ 1.11
Pcdha3-201ENSMUST00000192503 Mier1Q5UAK0 511 aa21.82■■□□□ 1.08
Pcdha3-201ENSMUST00000192503 Fam50aQ9WV03 339 aaKnown RBP21.81■■□□□ 1.08
Pcdha3-201ENSMUST00000192503 Anp32aO35381 247 aa21.79■■□□□ 1.08
Pcdha3-201ENSMUST00000192503 ClspnQ80YR7 1315 aa21.75■■□□□ 1.07
Pcdha3-201ENSMUST00000192503 Neurod1Q60867 357 aa21.74■■□□□ 1.07
Pcdha3-201ENSMUST00000192503 Ap3b1Q9Z1T1 1105 aa21.63■■□□□ 1.05
Pcdha3-201ENSMUST00000192503 Anks4bQ8K3X6 423 aa21.62■■□□□ 1.05
Pcdha3-201ENSMUST00000192503 Il27Q8K3I6 234 aa21.6■■□□□ 1.05
Pcdha3-201ENSMUST00000192503 Aplp2Q06335 707 aa21.54■■□□□ 1.04
Pcdha3-201ENSMUST00000192503 DaxxO35613 739 aa21.5■■□□□ 1.03
Pcdha3-201ENSMUST00000192503 Csrnp3P59055 597 aa21.5■■□□□ 1.03
Pcdha3-201ENSMUST00000192503 Zcchc6Q5BLK4 1491 aaKnown RBP21.45■■□□□ 1.02
Pcdha3-201ENSMUST00000192503 Sall2Q9QX96 1004 aa21.4■■□□□ 1.02
Pcdha3-201ENSMUST00000192503 Gm38655A0A286YDK6 273 aa21.39■■□□□ 1.01
Pcdha3-201ENSMUST00000192503 Os9Q8K2C7 672 aa21.34■■□□□ 1.01
Pcdha3-201ENSMUST00000192503 Dcaf1Q80TR8 1506 aa21.32■■□□□ 1
Pcdha3-201ENSMUST00000192503 Abcc9P70170 1546 aa21.2■□□□□ 0.98
Pcdha3-201ENSMUST00000192503 Plekhg3Q4VAC9 1341 aa21.16■□□□□ 0.98
Pcdha3-201ENSMUST00000192503 Calr4Q3TQS0 420 aa21.1■□□□□ 0.97
Pcdha3-201ENSMUST00000192503 Mapk8ip2Q9ERE9 830 aa21.08■□□□□ 0.97
Pcdha3-201ENSMUST00000192503 Ccdc9Q8VC31 543 aaKnown RBP21.04■□□□□ 0.96
Pcdha3-201ENSMUST00000192503 Ppp4r2Q0VGB7 417 aa21.03■□□□□ 0.96
Pcdha3-201ENSMUST00000192503 Lmod2Q3UHZ5 550 aa21■□□□□ 0.95
Pcdha3-201ENSMUST00000192503 1700123L14RikQ3V2K7 440 aa20.97■□□□□ 0.95
Pcdha3-201ENSMUST00000192503 Eid3Q3V124 375 aa20.97■□□□□ 0.95
Pcdha3-201ENSMUST00000192503 Cep164Q5DU05 1446 aa20.94■□□□□ 0.94
Pcdha3-201ENSMUST00000192503 Wdr43Q6ZQL4 677 aaKnown RBP20.93■□□□□ 0.94
Pcdha3-201ENSMUST00000192503 Hsp90aa1P07901 733 aaKnown RBP20.91■□□□□ 0.94
Pcdha3-201ENSMUST00000192503 Nlrp6Q91WS2 869 aa20.86■□□□□ 0.93
Pcdha3-201ENSMUST00000192503 ArxO35085 564 aa20.85■□□□□ 0.93
Pcdha3-201ENSMUST00000192503 Upf2A2AT37 1269 aaKnown RBP20.84■□□□□ 0.93
Pcdha3-201ENSMUST00000192503 Ccer2J3QPU5 274 aa20.83■□□□□ 0.92
Pcdha3-201ENSMUST00000192503 Clip1Q922J3 1391 aa20.81■□□□□ 0.92
Pcdha3-201ENSMUST00000192503 Fam71e1A1L3C1 212 aa20.77■□□□□ 0.92
Pcdha3-201ENSMUST00000192503 Zbtb7cQ8VCZ7 619 aa20.77■□□□□ 0.91
Pcdha3-201ENSMUST00000192503 Polr3glQ8R0C0 218 aa20.75■□□□□ 0.91
Pcdha3-201ENSMUST00000192503 Zbtb4Q5F293 982 aa20.73■□□□□ 0.91
Pcdha3-201ENSMUST00000192503 Hnrnpul2Q00PI9 745 aaKnown RBP20.71■□□□□ 0.91
Pcdha3-201ENSMUST00000192503 Ythdc1E9Q5K9 736 aaKnown RBP20.66■□□□□ 0.9
Pcdha3-201ENSMUST00000192503 Mrs2Q5NCE8 434 aa20.66■□□□□ 0.9
Pcdha3-201ENSMUST00000192503 Abcc8B2RUS7 1588 aa20.65■□□□□ 0.9
Pcdha3-201ENSMUST00000192503 Chic1Q8CBW7 227 aa20.64■□□□□ 0.9
Pcdha3-201ENSMUST00000192503 Npm1Q61937 292 aaKnown RBP20.63■□□□□ 0.89
Pcdha3-201ENSMUST00000192503 Gm35339A0A140LHH9 1649 aa20.62■□□□□ 0.89
Pcdha3-201ENSMUST00000192503 Hdac5Q9Z2V6 1113 aa20.61■□□□□ 0.89
Pcdha3-201ENSMUST00000192503 Bcl11aQ9QYE3 773 aa20.59■□□□□ 0.89
Pcdha3-201ENSMUST00000192503 Brd4Q9ESU6 1400 aaKnown RBP20.57■□□□□ 0.88
Pcdha3-201ENSMUST00000192503 Ccdc27Q3V036 639 aa20.57■□□□□ 0.88
Pcdha3-201ENSMUST00000192503 CatipB9EKE5 520 aa20.57■□□□□ 0.88
Pcdha3-201ENSMUST00000192503 CanxP35564 591 aaKnown RBP20.53■□□□□ 0.88
Pcdha3-201ENSMUST00000192503 Aebp2Q9Z248 504 aaKnown RBP20.53■□□□□ 0.88
Pcdha3-201ENSMUST00000192503 Rad21Q61550 635 aaKnown RBP20.52■□□□□ 0.88
Pcdha3-201ENSMUST00000192503 Trim44Q9QXA7 346 aa20.51■□□□□ 0.87
Pcdha3-201ENSMUST00000192503 Erich6D3Z6S9 713 aa20.51■□□□□ 0.87
Pcdha3-201ENSMUST00000192503 Prdm10Q3UTQ7 1184 aa20.51■□□□□ 0.87
Pcdha3-201ENSMUST00000192503 Lmod3E9QA62 571 aa20.46■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 9.6 ms