RNA–Protein interactions for RNA: ENSMUST00000190449.1

Msh4-205, Transcript of MutS protein homolog 4, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh4, Length 3,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4-205ENSMUST00000190449 NischQ80TM9 1593 aa16.22■□□□□ 0.19
Msh4-205ENSMUST00000190449 Gm35339A0A140LHH9 1649 aa15.99■□□□□ 0.15
Msh4-205ENSMUST00000190449 Abcc9P70170 1546 aa15.83■□□□□ 0.13
Msh4-205ENSMUST00000190449 Rtl1Q7M732 1744 aa15.55■□□□□ 0.08
Msh4-205ENSMUST00000190449 Abcc8B2RUS7 1588 aa15.36■□□□□ 0.05
Msh4-205ENSMUST00000190449 Ccdc180J3QNE4 1664 aa15.23■□□□□ 0.03
Msh4-205ENSMUST00000190449 Rhox8Q6VSS7 320 aa15.01□□□□□ -0.01
Msh4-205ENSMUST00000190449 Rpgrip1Q9EPQ2 1331 aa14.87□□□□□ -0.03
Msh4-205ENSMUST00000190449 Zcchc6Q5BLK4 1491 aaKnown RBP14.79□□□□□ -0.04
Msh4-205ENSMUST00000190449 Dcaf1Q80TR8 1506 aa14.49□□□□□ -0.09
Msh4-205ENSMUST00000190449 Acin1Q9JIX8 1338 aaKnown RBP14.44□□□□□ -0.1
Msh4-205ENSMUST00000190449 HrcG5E8J6 738 aa14.34□□□□□ -0.11
Msh4-205ENSMUST00000190449 Rb1cc1Q9ESK9 1588 aa14.24□□□□□ -0.13
Msh4-205ENSMUST00000190449 ScribQ80U72 1612 aa14.18□□□□□ -0.14
Msh4-205ENSMUST00000190449 Baz1aO88379 1555 aa14.12□□□□□ -0.15
Msh4-205ENSMUST00000190449 Kdm5dQ62240 1548 aa13.94□□□□□ -0.18
Msh4-205ENSMUST00000190449 Pcgf6Q99NA9 353 aa13.93□□□□□ -0.18
Msh4-205ENSMUST00000190449 Ehmt2Q9Z148 1263 aaKnown RBP13.92□□□□□ -0.18
Msh4-205ENSMUST00000190449 Ccdc136Q3TVA9 1136 aa13.88□□□□□ -0.19
Msh4-205ENSMUST00000190449 Cep164Q5DU05 1446 aa13.87□□□□□ -0.19
Msh4-205ENSMUST00000190449 Crybg2B7ZCC2 1516 aa13.86□□□□□ -0.19
Msh4-205ENSMUST00000190449 Smarca2Q6DIC0 1577 aa13.85□□□□□ -0.19
Msh4-205ENSMUST00000190449 Trim41Q5NCC3 630 aa13.81□□□□□ -0.2
Msh4-205ENSMUST00000190449 NacadQ5SWP3 1504 aa13.8□□□□□ -0.2
Msh4-205ENSMUST00000190449 Supt5hO55201 1082 aaKnown RBP13.58□□□□□ -0.24
Msh4-205ENSMUST00000190449 Rsf1E9PWW9 1441 aaKnown RBP13.51□□□□□ -0.25
Msh4-205ENSMUST00000190449 Sycp2Q9CUU3 1500 aa13.49□□□□□ -0.25
Msh4-205ENSMUST00000190449 Brd4Q9ESU6 1400 aaKnown RBP13.45□□□□□ -0.26
Msh4-205ENSMUST00000190449 NefmP08553 848 aa13.43□□□□□ -0.26
Msh4-205ENSMUST00000190449 Golga3P55937 1487 aa13.41□□□□□ -0.26
Msh4-205ENSMUST00000190449 Chic1Q8CBW7 227 aa13.38□□□□□ -0.27
Msh4-205ENSMUST00000190449 Neurod1Q60867 357 aa13.37□□□□□ -0.27
Msh4-205ENSMUST00000190449 Ccdc88bQ4QRL3 1481 aa13.37□□□□□ -0.27
Msh4-205ENSMUST00000190449 Synj1Q8CHC4 1574 aa13.32□□□□□ -0.28
Msh4-205ENSMUST00000190449 Top2bQ64511 1612 aa13.32□□□□□ -0.28
Msh4-205ENSMUST00000190449 Cecr2E9Q2Z1 1453 aa13.3□□□□□ -0.28
Msh4-205ENSMUST00000190449 Mier1Q5UAK0 511 aa13.28□□□□□ -0.28
Msh4-205ENSMUST00000190449 Cngb1E1AZ71 1325 aa13.27□□□□□ -0.28
Msh4-205ENSMUST00000190449 Las1lA2BE28 776 aaKnown RBP13.24□□□□□ -0.29
Msh4-205ENSMUST00000190449 Zeb1Q64318 1117 aa13.23□□□□□ -0.29
Msh4-205ENSMUST00000190449 Gab3Q8BSM5 595 aa13.22□□□□□ -0.29
Msh4-205ENSMUST00000190449 CftrP26361 1476 aa13.19□□□□□ -0.3
Msh4-205ENSMUST00000190449 Cttnbp2B9EJA2 1648 aa13.18□□□□□ -0.3
Msh4-205ENSMUST00000190449 Sall2Q9QX96 1004 aa13.18□□□□□ -0.3
Msh4-205ENSMUST00000190449 BicraF8VPZ9 1578 aa13.16□□□□□ -0.3
Msh4-205ENSMUST00000190449 Rapgef2Q8CHG7 1496 aa13.13□□□□□ -0.31
Msh4-205ENSMUST00000190449 Anks4bQ8K3X6 423 aa13.13□□□□□ -0.31
Msh4-205ENSMUST00000190449 Cc2d2aQ8CFW7 1633 aa13.11□□□□□ -0.31
Msh4-205ENSMUST00000190449 Top2aQ01320 1528 aaKnown RBP13.06□□□□□ -0.32
Msh4-205ENSMUST00000190449 Fmn1Q05860 1466 aa13.02□□□□□ -0.32
Msh4-205ENSMUST00000190449 Smarca4Q3TKT4 1613 aaKnown RBP12.99□□□□□ -0.33
Msh4-205ENSMUST00000190449 ClspnQ80YR7 1315 aa12.97□□□□□ -0.33
Msh4-205ENSMUST00000190449 1700123L14RikQ3V2K7 440 aa12.97□□□□□ -0.33
Msh4-205ENSMUST00000190449 Eif4g1Q6NZJ6 1600 aaKnown RBP12.97□□□□□ -0.33
Msh4-205ENSMUST00000190449 Cep162Q6ZQ06 1403 aa12.96□□□□□ -0.33
Msh4-205ENSMUST00000190449 Esf1Q3V1V3 845 aaKnown RBP12.93□□□□□ -0.34
Msh4-205ENSMUST00000190449 Aebp2Q9Z248 504 aaKnown RBP12.93□□□□□ -0.34
Msh4-205ENSMUST00000190449 Csrnp3P59055 597 aa12.9□□□□□ -0.34
Msh4-205ENSMUST00000190449 UbtfP25976 765 aaKnown RBP12.89□□□□□ -0.35
Msh4-205ENSMUST00000190449 Cdk11bP24788 784 aaKnown RBP12.88□□□□□ -0.35
Msh4-205ENSMUST00000190449 Aplp2Q06335 707 aa12.88□□□□□ -0.35
Msh4-205ENSMUST00000190449 Wdr66E9Q743 1299 aa12.86□□□□□ -0.35
Msh4-205ENSMUST00000190449 Ncapd3Q6ZQK0 1506 aa12.86□□□□□ -0.35
Msh4-205ENSMUST00000190449 Nop58Q6DFW4 536 aaKnown RBP12.86□□□□□ -0.35
Msh4-205ENSMUST00000190449 Myt1Q8CFC2 1127 aa12.82□□□□□ -0.36
Msh4-205ENSMUST00000190449 TonslQ6NZL6 1363 aa12.81□□□□□ -0.36
Msh4-205ENSMUST00000190449 TnnQ80Z71 1560 aa12.8□□□□□ -0.36
Msh4-205ENSMUST00000190449 Iqgap2Q3UQ44 1575 aa12.76□□□□□ -0.37
Msh4-205ENSMUST00000190449 Clip1Q922J3 1391 aa12.75□□□□□ -0.37
Msh4-205ENSMUST00000190449 Kdm5bQ80Y84 1544 aa12.74□□□□□ -0.37
Msh4-205ENSMUST00000190449 CenpbP27790 599 aa12.71□□□□□ -0.38
Msh4-205ENSMUST00000190449 TchhA0A0B4J1F9 1599 aa12.69□□□□□ -0.38
Msh4-205ENSMUST00000190449 Arhgap35Q91YM2 1499 aa12.69□□□□□ -0.38
Msh4-205ENSMUST00000190449 NrkQ9R0G8 1455 aa12.68□□□□□ -0.38
Msh4-205ENSMUST00000190449 Ccdc18Q640L5 1455 aa12.68□□□□□ -0.38
Msh4-205ENSMUST00000190449 Myt1lP97500 1187 aa12.67□□□□□ -0.38
Msh4-205ENSMUST00000190449 Arhgef5E9Q7D5 1581 aa12.65□□□□□ -0.38
Msh4-205ENSMUST00000190449 Arap1Q4LDD4 1452 aa12.65□□□□□ -0.38
Msh4-205ENSMUST00000190449 Eea1Q8BL66 1411 aa12.62□□□□□ -0.39
Msh4-205ENSMUST00000190449 Npm2Q80W85 207 aa12.62□□□□□ -0.39
Msh4-205ENSMUST00000190449 Map3k1P53349 1493 aa12.62□□□□□ -0.39
Msh4-205ENSMUST00000190449 Plekhg3Q4VAC9 1341 aa12.61□□□□□ -0.39
Msh4-205ENSMUST00000190449 Atad2bE9Q166 1460 aaKnown RBP12.6□□□□□ -0.39
Msh4-205ENSMUST00000190449 Erich3F6QRE9 1637 aa12.58□□□□□ -0.39
Msh4-205ENSMUST00000190449 Tiam1Q60610 1591 aa12.58□□□□□ -0.4
Msh4-205ENSMUST00000190449 Lamc3Q9R0B6 1581 aa12.57□□□□□ -0.4
Msh4-205ENSMUST00000190449 Ppargc1bQ8VHJ7 1014 aa12.56□□□□□ -0.4
Msh4-205ENSMUST00000190449 PtprkP35822 1457 aa12.56□□□□□ -0.4
Msh4-205ENSMUST00000190449 Tnnt3Q9QZ47 272 aa12.55□□□□□ -0.4
Msh4-205ENSMUST00000190449 Shroom4Q1W617 1475 aa12.54□□□□□ -0.4
Msh4-205ENSMUST00000190449 Baz1bQ9Z277 1479 aa12.53□□□□□ -0.4
Msh4-205ENSMUST00000190449 Camsap1A2AHC3 1581 aa12.52□□□□□ -0.4
Msh4-205ENSMUST00000190449 Setd5Q5XJV7 1441 aa12.48□□□□□ -0.41
Msh4-205ENSMUST00000190449 Wdr62Q3U3T8 1523 aa12.47□□□□□ -0.41
Msh4-205ENSMUST00000190449 Ankrd26Q811D2 1581 aa12.47□□□□□ -0.41
Msh4-205ENSMUST00000190449 UacaQ8CGB3 1411 aa12.46□□□□□ -0.41
Msh4-205ENSMUST00000190449 AqrQ8CFQ3 1481 aaKnown RBP12.46□□□□□ -0.41
Msh4-205ENSMUST00000190449 Pds5bQ4VA53 1446 aaKnown RBP12.46□□□□□ -0.41
Msh4-205ENSMUST00000190449 Naip1Q9QWK5 1403 aa12.46□□□□□ -0.41
Msh4-205ENSMUST00000190449 Rpap1Q80TE0 1409 aa12.45□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 9.1 ms