RNA–Protein interactions for RNA: ENSMUST00000190118.1

Gm28231-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28231, Length 2,599 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28231-201ENSMUST00000190118 Ube2uB1AUC4 352 aa17.33■□□□□ 0.36
Gm28231-201ENSMUST00000190118 Mapk8ip2Q9ERE9 830 aa15.88■□□□□ 0.13
Gm28231-201ENSMUST00000190118 Ehmt2Q9Z148 1263 aaKnown RBP15.83■□□□□ 0.13
Gm28231-201ENSMUST00000190118 Chic1Q8CBW7 227 aa15.83■□□□□ 0.12
Gm28231-201ENSMUST00000190118 Kcna4Q61423 654 aa15.76■□□□□ 0.11
Gm28231-201ENSMUST00000190118 Ppargc1bQ8VHJ7 1014 aa15.55■□□□□ 0.08
Gm28231-201ENSMUST00000190118 Plppr3Q7TPB0 716 aa15.51■□□□□ 0.07
Gm28231-201ENSMUST00000190118 DiexfQ8BTT6 772 aaKnown RBP15.41■□□□□ 0.06
Gm28231-201ENSMUST00000190118 Ttbk1Q6PCN3 1308 aa15.24■□□□□ 0.03
Gm28231-201ENSMUST00000190118 ArxO35085 564 aa14.97□□□□□ -0.01
Gm28231-201ENSMUST00000190118 Phf23Q8BSN5 401 aa14.83□□□□□ -0.04
Gm28231-201ENSMUST00000190118 CatipB9EKE5 520 aa14.72□□□□□ -0.05
Gm28231-201ENSMUST00000190118 Fam71e1A1L3C1 212 aa14.71□□□□□ -0.06
Gm28231-201ENSMUST00000190118 Arid3aQ62431 601 aa14.64□□□□□ -0.07
Gm28231-201ENSMUST00000190118 Prdm16A2A935 1275 aa14.55□□□□□ -0.08
Gm28231-201ENSMUST00000190118 Prdm10Q3UTQ7 1184 aa14.47□□□□□ -0.09
Gm28231-201ENSMUST00000190118 Gab3Q8BSM5 595 aa14.46□□□□□ -0.09
Gm28231-201ENSMUST00000190118 Taok2Q6ZQ29 1240 aa14.44□□□□□ -0.1
Gm28231-201ENSMUST00000190118 UbtfP25976 765 aaKnown RBP14.25□□□□□ -0.13
Gm28231-201ENSMUST00000190118 Vsig10D3YX43 558 aa14.15□□□□□ -0.14
Gm28231-201ENSMUST00000190118 Senp3Q9EP97 568 aaKnown RBP14.15□□□□□ -0.14
Gm28231-201ENSMUST00000190118 Slc4a1apE9PX68 744 aa14.15□□□□□ -0.14
Gm28231-201ENSMUST00000190118 Npm2Q80W85 207 aa14.09□□□□□ -0.15
Gm28231-201ENSMUST00000190118 Dmrt2Q8BG36 561 aa14.06□□□□□ -0.16
Gm28231-201ENSMUST00000190118 Rhox8Q6VSS7 320 aa14.01□□□□□ -0.17
Gm28231-201ENSMUST00000190118 Ecm2Q5FW85 670 aa14.01□□□□□ -0.17
Gm28231-201ENSMUST00000190118 Pde4cQ3UEI1 686 aa13.93□□□□□ -0.18
Gm28231-201ENSMUST00000190118 Bcl11aQ9QYE3 773 aa13.93□□□□□ -0.18
Gm28231-201ENSMUST00000190118 AcrbpQ3V140 540 aa13.85□□□□□ -0.19
Gm28231-201ENSMUST00000190118 Tshz2Q68FE9 1030 aa13.83□□□□□ -0.2
Gm28231-201ENSMUST00000190118 Q8BT18 775 aa13.72□□□□□ -0.21
Gm28231-201ENSMUST00000190118 Rtn4Q99P72 1162 aaKnown RBP13.67□□□□□ -0.22
Gm28231-201ENSMUST00000190118 Ripply1Q2WG77 201 aa13.59□□□□□ -0.23
Gm28231-201ENSMUST00000190118 Ncbp3Q8BZR9 615 aaKnown RBP13.58□□□□□ -0.24
Gm28231-201ENSMUST00000190118 Aplp2Q06335 707 aa13.56□□□□□ -0.24
Gm28231-201ENSMUST00000190118 Nlrp6Q91WS2 869 aa13.56□□□□□ -0.24
Gm28231-201ENSMUST00000190118 Gm35339A0A140LHH9 1649 aa13.53□□□□□ -0.24
Gm28231-201ENSMUST00000190118 Pelp1Q9DBD5 1123 aaKnown RBP13.44□□□□□ -0.26
Gm28231-201ENSMUST00000190118 Os9Q8K2C7 672 aa13.36□□□□□ -0.27
Gm28231-201ENSMUST00000190118 NischQ80TM9 1593 aa13.32□□□□□ -0.28
Gm28231-201ENSMUST00000190118 Esf1Q3V1V3 845 aaKnown RBP13.31□□□□□ -0.28
Gm28231-201ENSMUST00000190118 PrkcshO08795 521 aa13.28□□□□□ -0.28
Gm28231-201ENSMUST00000190118 Rsph4aQ8BYM7 716 aa13.22□□□□□ -0.29
Gm28231-201ENSMUST00000190118 Cdca7Q9D0M2 382 aa13.21□□□□□ -0.3
Gm28231-201ENSMUST00000190118 Amer1Q7TS75 1132 aa13.19□□□□□ -0.3
Gm28231-201ENSMUST00000190118 Prm3Q62100 101 aa13.15□□□□□ -0.3
Gm28231-201ENSMUST00000190118 Stag3O70576 1240 aa13.13□□□□□ -0.31
Gm28231-201ENSMUST00000190118 4930567H17RikQ3V0K5 233 aa13.07□□□□□ -0.32
Gm28231-201ENSMUST00000190118 1700123L14RikQ3V2K7 440 aa12.99□□□□□ -0.33
Gm28231-201ENSMUST00000190118 Plcd4Q8K3R3 807 aa12.99□□□□□ -0.33
Gm28231-201ENSMUST00000190118 Atf5O70191 283 aa12.97□□□□□ -0.33
Gm28231-201ENSMUST00000190118 Skap1Q3UUV5 355 aa12.93□□□□□ -0.34
Gm28231-201ENSMUST00000190118 Abcc8B2RUS7 1588 aa12.91□□□□□ -0.34
Gm28231-201ENSMUST00000190118 Abcc9P70170 1546 aa12.88□□□□□ -0.35
Gm28231-201ENSMUST00000190118 Zbtb7cQ8VCZ7 619 aa12.87□□□□□ -0.35
Gm28231-201ENSMUST00000190118 Zbtb38Q3LR78 1197 aa12.86□□□□□ -0.35
Gm28231-201ENSMUST00000190118 Gm13697A2AK42 830 aa12.77□□□□□ -0.36
Gm28231-201ENSMUST00000190118 Rad21Q61550 635 aaKnown RBP12.77□□□□□ -0.37
Gm28231-201ENSMUST00000190118 Styxl1Q9DAR2 321 aa12.77□□□□□ -0.37
Gm28231-201ENSMUST00000190118 Mkrn3Q60764 544 aa12.76□□□□□ -0.37
Gm28231-201ENSMUST00000190118 MyclP10166 368 aa12.76□□□□□ -0.37
Gm28231-201ENSMUST00000190118 Gtf3c5Q8R2T8 520 aa12.73□□□□□ -0.37
Gm28231-201ENSMUST00000190118 Tmem132aQ922P8 1018 aa12.73□□□□□ -0.37
Gm28231-201ENSMUST00000190118 Cnksr2Q80YA9 1032 aa12.72□□□□□ -0.37
Gm28231-201ENSMUST00000190118 Fbxo3Q9DC63 480 aa12.7□□□□□ -0.38
Gm28231-201ENSMUST00000190118 Igsf3Q6ZQA6 1194 aa12.69□□□□□ -0.38
Gm28231-201ENSMUST00000190118 Hs6st3Q9QYK4 470 aa12.68□□□□□ -0.38
Gm28231-201ENSMUST00000190118 Ubap1lG3UW59 384 aa12.67□□□□□ -0.38
Gm28231-201ENSMUST00000190118 Gtf3c3Q3TMP1 882 aa12.63□□□□□ -0.39
Gm28231-201ENSMUST00000190118 TimelessQ9R1X4 1197 aa12.62□□□□□ -0.39
Gm28231-201ENSMUST00000190118 Scaf1Q5U4C3 1256 aaKnown RBP12.6□□□□□ -0.39
Gm28231-201ENSMUST00000190118 Eif5bQ05D44 1216 aaKnown RBP12.57□□□□□ -0.4
Gm28231-201ENSMUST00000190118 BccipQ9CWI3 316 aa12.56□□□□□ -0.4
Gm28231-201ENSMUST00000190118 4933416C03RikQ3V063 378 aa12.55□□□□□ -0.4
Gm28231-201ENSMUST00000190118 Kdm2aP59997 1161 aa12.54□□□□□ -0.4
Gm28231-201ENSMUST00000190118 ScribQ80U72 1612 aa12.53□□□□□ -0.4
Gm28231-201ENSMUST00000190118 Skida1Q80YR3 822 aa12.53□□□□□ -0.4
Gm28231-201ENSMUST00000190118 Myt1Q8CFC2 1127 aa12.53□□□□□ -0.4
Gm28231-201ENSMUST00000190118 Dnajc5P60904 198 aa12.49□□□□□ -0.41
Gm28231-201ENSMUST00000190118 Ppp4r2Q0VGB7 417 aa12.49□□□□□ -0.41
Gm28231-201ENSMUST00000190118 Cers3Q1A3B0 383 aa12.48□□□□□ -0.41
Gm28231-201ENSMUST00000190118 Kiaa1211Q5PR69 1207 aa12.47□□□□□ -0.41
Gm28231-201ENSMUST00000190118 Ppp6r1Q7TSI3 856 aa12.44□□□□□ -0.42
Gm28231-201ENSMUST00000190118 Spryd3E9Q9B3 442 aa12.42□□□□□ -0.42
Gm28231-201ENSMUST00000190118 Ciz1Q8VEH2 845 aa12.41□□□□□ -0.42
Gm28231-201ENSMUST00000190118 Znf326O88291 580 aa12.41□□□□□ -0.42
Gm28231-201ENSMUST00000190118 Riok3Q9DBU3 519 aaKnown RBP12.37□□□□□ -0.43
Gm28231-201ENSMUST00000190118 Npm1Q61937 292 aaKnown RBP12.35□□□□□ -0.43
Gm28231-201ENSMUST00000190118 Ube2q2Q8K2Z8 378 aa12.35□□□□□ -0.43
Gm28231-201ENSMUST00000190118 Trap1aP19473 224 aa12.33□□□□□ -0.44
Gm28231-201ENSMUST00000190118 Brpf1B2RRD7 1212 aa12.29□□□□□ -0.44
Gm28231-201ENSMUST00000190118 HrcG5E8J6 738 aa12.29□□□□□ -0.44
Gm28231-201ENSMUST00000190118 Plcd3Q8K2J0 785 aa12.28□□□□□ -0.44
Gm28231-201ENSMUST00000190118 Zeb1Q64318 1117 aa12.26□□□□□ -0.45
Gm28231-201ENSMUST00000190118 Tcf3P15806 651 aa12.25□□□□□ -0.45
Gm28231-201ENSMUST00000190118 Irx6Q9ER75 438 aa12.25□□□□□ -0.45
Gm28231-201ENSMUST00000190118 Ggt6Q6PDE7 497 aa12.25□□□□□ -0.45
Gm28231-201ENSMUST00000190118 Gtf3c6Q9D8P7 227 aa12.22□□□□□ -0.45
Gm28231-201ENSMUST00000190118 Fam163aQ8CAA5 168 aa12.2□□□□□ -0.46
Gm28231-201ENSMUST00000190118 Zbtb22Q9Z0G7 638 aa12.2□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms